Dr Soichiro Tsuda
- Affiliate (School of Chemistry)
email:
Soichiro.Tsuda@glasgow.ac.uk
School of Chemisty, Joseph Black Building, University Avenue, Glasgow G12 8QQ
Publications
2020
Parrilla Gutierrez, Juan Manuel ORCID: https://orcid.org/0000-0002-5301-7194, Sharma, Abhishek
ORCID: https://orcid.org/0000-0002-5222-9611, Tsuda, Soichiro, Cooper, Geoffrey J.T.
ORCID: https://orcid.org/0000-0003-2341-1737, Aragon Camarasa, Gerardo
ORCID: https://orcid.org/0000-0003-3756-5569, Donkers, Kevin and Cronin, Lee
ORCID: https://orcid.org/0000-0001-8035-5757
(2020)
A programmable chemical computer with memory and pattern recognition.
Nature Communications, 11,
1442.
(doi: 10.1038/s41467-020-15190-3)
(PMID:32188858)
(PMCID:PMC7080730)
2018
Yoshida, Mari ORCID: https://orcid.org/0000-0003-1380-967X, Hinkley, Trevor, Tsuda, Soichiro, Abul-Haija, Yousef
ORCID: https://orcid.org/0000-0002-0357-0653, Mcburney, Roy T., Kulikov, Vladislav, Mathieson, Jennifer, Galinanes Reyes, Sabrina, Castro Spencer, Maria D. and Cronin, Leroy
ORCID: https://orcid.org/0000-0001-8035-5757
(2018)
Using evolutionary algorithms and machine learning to explore sequence space for the discovery of antimicrobial peptides.
Chem, 4(3),
pp. 533-543.
(doi: 10.1016/j.chempr.2018.01.005)
2017
Parrilla Gutierrez, Juan Manuel ORCID: https://orcid.org/0000-0002-5301-7194, Tsuda, Soichiro, Grizou, Jonathan
ORCID: https://orcid.org/0000-0002-2211-4389, Taylor, James, Henson, Alon
ORCID: https://orcid.org/0000-0001-6028-439X and Cronin, Leroy
ORCID: https://orcid.org/0000-0001-8035-5757
(2017)
Adaptive artificial evolution of droplet protocells in a 3D-printed fluidic chemorobotic platform with configurable environments.
Nature Communications, 8,
1144.
(doi: 10.1038/s41467-017-01161-8)
(PMID:29074987)
(PMCID:PMC5658334)
Yoshida, Mari ORCID: https://orcid.org/0000-0003-1380-967X, Galiñanes Reyes, Sabrina Galiñanes, Tsuda, Soichiro, Horinouchi, Takaaki, Furusawa, Chikara and Cronin, Leroy
ORCID: https://orcid.org/0000-0001-8035-5757
(2017)
Time-programmable drug dosing allows the manipulation, suppression and reversal of antibiotic drug resistance in vitro.
Nature Communications, 8,
15589.
(doi: 10.1038/ncomms15589)
(PMID:28593940)
(PMCID:PMC5472167)
2016
Hosoda, Kazufumi, Tsuda, Soichiro, Kadowaki, Kohmei and Nakamura, Yutaka (2016) Population–reaction model and microbial experimental ecosystems for understanding hierarchical dynamics of ecosystems. BioSystems, 140, pp. 28-34. (doi: 10.1016/j.biosystems.2015.12.005) (PMID:26747638)
2015
Tsuda, Soichiro, Jaffery, Hussain, Doran, David, Hezwani, Mohammad, Robbins, Phillip J., Yoshida, Mari ORCID: https://orcid.org/0000-0003-1380-967X and Cronin, Leroy
ORCID: https://orcid.org/0000-0001-8035-5757
(2015)
Customizable 3D printed 'Plug and Play' millifluidic devices for programmable fluidics.
PLoS ONE, 10(11),
e0141640.
(doi: 10.1371/journal.pone.0141640)
(PMID:26558389)
(PMCID:PMC4641590)
Henson, Alon ORCID: https://orcid.org/0000-0001-6028-439X, Parrilla Gutierrez, Juan Manuel
ORCID: https://orcid.org/0000-0002-5301-7194, Hinkley, Trevor, Tsuda, Soichiro and Cronin, Leroy
ORCID: https://orcid.org/0000-0001-8035-5757
(2015)
Towards heterotic computing with droplets in a fully automated droplet-maker platform.
Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 373(2046),
20140221.
(doi: 10.1098/rsta.2014.0221)
(PMID:26078348)
Tsuda, Soichiro, Sakakura, Tatsuya, Fujii, Satoshi, Suzuki, Hiroaki and Yomo, Tetsuya (2015) Shape transformations of lipid vesicles by insertion of bulky-head lipids. PLoS ONE, 10(7), e0132963. (doi: 10.1371/journal.pone.0132963) (PMID:26176953) (PMCID:PMC4503622)
2014
Tsuda, Soichiro, Suzuki, Hiroaki and Yomo, Tetsuya (2014) Statistical analysis of vesicle morphology dynamics based on a free energy landscape. Soft Matter, 10(32), pp. 6038-6046. (doi: 10.1039/c4sm00992d)
Kitson, Philip J., Macdonell, Andrew, Tsuda, Soichiro, Zang, HongYing, Long, De-Liang ORCID: https://orcid.org/0000-0003-3241-2379 and Cronin, Leroy
ORCID: https://orcid.org/0000-0001-8035-5757
(2014)
Bringing crystal structures to reality by three-dimensional printing.
Crystal Growth and Design, 14(6),
pp. 2720-2724.
(doi: 10.1021/cg5003012)
Isalan, Mark, Shiomi, Hideaki, Tsuda, Soichiro, Suzuki, Hiroaki and Yomo, Tetsuya (2014) Liposome-based liquid handling platform featuring addition, mixing, and aliquoting of femtoliter volumes. PLoS ONE, 9(7), e101820. (doi: 10.1371/journal.pone.0101820) (PMID:24991878) (PMCID:PMC4081812)
2012
Tsuda, Soichiro, Jones, Jeff and Adamatzky, Andrew (2012) Towards Physarum engines. Applied Bionics and Biomechanics, 9(3), pp. 221-240. (doi: 10.3233/ABB-2012-0059)
Articles
Parrilla Gutierrez, Juan Manuel ORCID: https://orcid.org/0000-0002-5301-7194, Sharma, Abhishek
ORCID: https://orcid.org/0000-0002-5222-9611, Tsuda, Soichiro, Cooper, Geoffrey J.T.
ORCID: https://orcid.org/0000-0003-2341-1737, Aragon Camarasa, Gerardo
ORCID: https://orcid.org/0000-0003-3756-5569, Donkers, Kevin and Cronin, Lee
ORCID: https://orcid.org/0000-0001-8035-5757
(2020)
A programmable chemical computer with memory and pattern recognition.
Nature Communications, 11,
1442.
(doi: 10.1038/s41467-020-15190-3)
(PMID:32188858)
(PMCID:PMC7080730)
Yoshida, Mari ORCID: https://orcid.org/0000-0003-1380-967X, Hinkley, Trevor, Tsuda, Soichiro, Abul-Haija, Yousef
ORCID: https://orcid.org/0000-0002-0357-0653, Mcburney, Roy T., Kulikov, Vladislav, Mathieson, Jennifer, Galinanes Reyes, Sabrina, Castro Spencer, Maria D. and Cronin, Leroy
ORCID: https://orcid.org/0000-0001-8035-5757
(2018)
Using evolutionary algorithms and machine learning to explore sequence space for the discovery of antimicrobial peptides.
Chem, 4(3),
pp. 533-543.
(doi: 10.1016/j.chempr.2018.01.005)
Parrilla Gutierrez, Juan Manuel ORCID: https://orcid.org/0000-0002-5301-7194, Tsuda, Soichiro, Grizou, Jonathan
ORCID: https://orcid.org/0000-0002-2211-4389, Taylor, James, Henson, Alon
ORCID: https://orcid.org/0000-0001-6028-439X and Cronin, Leroy
ORCID: https://orcid.org/0000-0001-8035-5757
(2017)
Adaptive artificial evolution of droplet protocells in a 3D-printed fluidic chemorobotic platform with configurable environments.
Nature Communications, 8,
1144.
(doi: 10.1038/s41467-017-01161-8)
(PMID:29074987)
(PMCID:PMC5658334)
Yoshida, Mari ORCID: https://orcid.org/0000-0003-1380-967X, Galiñanes Reyes, Sabrina Galiñanes, Tsuda, Soichiro, Horinouchi, Takaaki, Furusawa, Chikara and Cronin, Leroy
ORCID: https://orcid.org/0000-0001-8035-5757
(2017)
Time-programmable drug dosing allows the manipulation, suppression and reversal of antibiotic drug resistance in vitro.
Nature Communications, 8,
15589.
(doi: 10.1038/ncomms15589)
(PMID:28593940)
(PMCID:PMC5472167)
Hosoda, Kazufumi, Tsuda, Soichiro, Kadowaki, Kohmei and Nakamura, Yutaka (2016) Population–reaction model and microbial experimental ecosystems for understanding hierarchical dynamics of ecosystems. BioSystems, 140, pp. 28-34. (doi: 10.1016/j.biosystems.2015.12.005) (PMID:26747638)
Tsuda, Soichiro, Jaffery, Hussain, Doran, David, Hezwani, Mohammad, Robbins, Phillip J., Yoshida, Mari ORCID: https://orcid.org/0000-0003-1380-967X and Cronin, Leroy
ORCID: https://orcid.org/0000-0001-8035-5757
(2015)
Customizable 3D printed 'Plug and Play' millifluidic devices for programmable fluidics.
PLoS ONE, 10(11),
e0141640.
(doi: 10.1371/journal.pone.0141640)
(PMID:26558389)
(PMCID:PMC4641590)
Henson, Alon ORCID: https://orcid.org/0000-0001-6028-439X, Parrilla Gutierrez, Juan Manuel
ORCID: https://orcid.org/0000-0002-5301-7194, Hinkley, Trevor, Tsuda, Soichiro and Cronin, Leroy
ORCID: https://orcid.org/0000-0001-8035-5757
(2015)
Towards heterotic computing with droplets in a fully automated droplet-maker platform.
Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 373(2046),
20140221.
(doi: 10.1098/rsta.2014.0221)
(PMID:26078348)
Tsuda, Soichiro, Sakakura, Tatsuya, Fujii, Satoshi, Suzuki, Hiroaki and Yomo, Tetsuya (2015) Shape transformations of lipid vesicles by insertion of bulky-head lipids. PLoS ONE, 10(7), e0132963. (doi: 10.1371/journal.pone.0132963) (PMID:26176953) (PMCID:PMC4503622)
Tsuda, Soichiro, Suzuki, Hiroaki and Yomo, Tetsuya (2014) Statistical analysis of vesicle morphology dynamics based on a free energy landscape. Soft Matter, 10(32), pp. 6038-6046. (doi: 10.1039/c4sm00992d)
Kitson, Philip J., Macdonell, Andrew, Tsuda, Soichiro, Zang, HongYing, Long, De-Liang ORCID: https://orcid.org/0000-0003-3241-2379 and Cronin, Leroy
ORCID: https://orcid.org/0000-0001-8035-5757
(2014)
Bringing crystal structures to reality by three-dimensional printing.
Crystal Growth and Design, 14(6),
pp. 2720-2724.
(doi: 10.1021/cg5003012)
Isalan, Mark, Shiomi, Hideaki, Tsuda, Soichiro, Suzuki, Hiroaki and Yomo, Tetsuya (2014) Liposome-based liquid handling platform featuring addition, mixing, and aliquoting of femtoliter volumes. PLoS ONE, 9(7), e101820. (doi: 10.1371/journal.pone.0101820) (PMID:24991878) (PMCID:PMC4081812)
Tsuda, Soichiro, Jones, Jeff and Adamatzky, Andrew (2012) Towards Physarum engines. Applied Bionics and Biomechanics, 9(3), pp. 221-240. (doi: 10.3233/ABB-2012-0059)