Dr Paul Johnson

  • Lecturer (Institute of Biodiversity Animal Health & Comparative Medicine)
  • Associate (School of Life Sciences)

Research interests

Google Scholar

I'm a statistician and geneticist with interests in developing and applying statistical methods across fields ranging from population genetics to ecology to human and veterinary epidemiology; using computer simulation to improve study design; power analysis; genetic association studies; modelling genotyping errors; and GLMMs.

You can find out more about my research here: https://sites.google.com/site/pcdjohnson/home


Grants

Grants and Awards listed are those received whilst working with the University of Glasgow.

  • Studies on Ecology, Colonization and Genetic Diversity of the Afro-tropical Malaria Vector, Anopheles funestus
    Bill and Melinda Gates Foundation
    2017 - 2019
     
  • Comparing the fitness and patient landscapes of HIV-1 (ISSF Catalyst)
    Wellcome Trust
    2014 - 2015
     
  • Developing valid models of psychopathology experienced by adults with learning disabilities
    Chief Scientist Office
    2012 - 2013
     
  • The origins and mechanisms of human infectivity in African trypanosomes.
    Wellcome Trust
    2011 - 2017
     

All publications

List by: Type | Date

Jump to: 2018 | 2017 | 2016 | 2015 | 2014 | 2013 | 2012 | 2011 | 2010 | 2009 | 2008 | 2007 | 2006 | 2005 | 2003 | 2002 | 2001 | 2000
Number of items: 71.

2018

Millins, C. et al. (2018) Landscape structure affects the prevalence and distribution of a tick-borne zoonotic pathogen. Parasites and Vectors, 11, 621. (doi:10.1186/s13071-018-3200-2) (PMID:30514350) (PMCID:PMC6278045)

Sambo, M., Hampson, K. , Changalucha, J., Cleaveland, S. , Lembo, T. , Lushasi, K., Mbunda, E., Mtema, Z., Sikana, L. and Johnson, P. C.D. (2018) Estimating the size of dog populations in Tanzania to inform rabies control. Veterinary Sciences, 5(3), 77. (doi:10.3390/vetsci5030077)

2017

Nakagawa, S., Johnson, P. C.D. and Schielzeth, H. (2017) The coefficient of determination R2 and intra-class correlation coefficient from generalized linear mixed-effects models revisited and expanded. Journal of the Royal Society: Interface, 14(134), 20170213. (doi:10.1098/rsif.2017.0213) (PMID:28904005) (PMCID:PMC5636267)

Sambo, M. et al. (2017) Comparing methods of assessing dog rabies vaccination coverage in rural and urban communities in Tanzania. Frontiers in Veterinary Science, 4, 33. (doi:10.3389/fvets.2017.00033) (PMID:28352630) (PMCID:PMC5348529)

2016

Millins, C. , Gilbert, L., Johnson, P. , James, M., Kilbride, E., Birtles, R. and Biek, R. (2016) Heterogeneity in the abundance and distribution of Ixodes ricinus and Borrelia burgdorferi (sensu lato) in Scotland: implications for risk prediction. Parasites and Vectors, 9, 595. (doi:10.1186/s13071-016-1875-9) (PMID:27876087) (PMCID:PMC5084683)

Maliti, D. V., Govella, N. J., Killeen, G. F., Mirzai, N., Johnson, P. C.D. , Kreppel, K. and Ferguson, H. M. (2016) Erratum to: Development and evaluation of mosquito-electrocuting traps as alternatives to the human landing catch technique for sampling host-seeking malaria vectors. Malaria Journal, 15, 558. (doi:10.1186/s12936-016-1562-5) (PMID:27846883) (PMCID:PMC5111336)

Govella, N. J., Maliti, D. F., Mlwale, A. T., Massallu, J. P., Mirzai, N., Johnson, P. C.D. , Ferguson, H. M. and Killeen, G. F. (2016) An improved mosquito electrocuting trap that safely reproduces epidemiologically relevant metrics of mosquito human-feeding behaviours as determined by human landing catch. Malaria Journal, 15, 465. (doi:10.1186/s12936-016-1513-1)

Melville, C. A. , Johnson, P. C. D. , Smiley, E., Simpson, N., Purves, D., McConnachie, A. and Cooper, S.-A. (2016) Problem behaviours and symptom dimensions of psychiatric disorders in adults with intellectual disabilities: An exploratory and confirmatory factor analysis. Research in Developmental Disabilities, 55, pp. 1-13. (doi:10.1016/j.ridd.2016.03.007) (PMID:27018744)

Melville, C.A. , Johnson, P.C.D. , Smiley, E., Simpson, N., McConnachie, A. , Purves, D., Osugo, M. and Cooper, S.-A. (2016) Statistical modelling studies examining the dimensional structure of psychopathology experienced by adults with intellectual disabilities: Systematic review. Research in Developmental Disabilities, 53-54, pp. 1-10. (doi:10.1016/j.ridd.2016.01.018) (PMID:26852278)

Reynolds, A., Lindstrom, J., Johnson, P. C.D. and Mable, B. K. (2016) Evolution of drug-tolerant nematode populations in response to density reduction. Evolutionary Applications, 9(5), pp. 726-738. (doi:10.1111/eva.12376) (PMID:27247622) (PMCID:PMC4869413)

Clarke, A. T., Johnson, P. C.D. , Hall, G. C., Ford, I. and Mills, P. (2016) High dose atorvastatin associated with increased risk of significant hepatotoxicity in comparison to simvastatin in UK GPRD cohort. PLoS ONE, 11(3), e0151587. (doi:10.1371/journal.pone.0151587) (PMID:26983033) (PMCID:PMC4794178)

Trewby, H. et al. (2016) Use of bacterial whole-genome sequencing to investigate local persistence and spread in bovine tuberculosis. Epidemics, 14, pp. 26-35. (doi:10.1016/j.epidem.2015.08.003) (PMID:26972511) (PMCID:PMC4773590)

Hammer, S. , Nager, R.G. , Johnson, P.C.D. , Furness, R.W. and Provencher, J.F. (2016) Plastic debris in great skua (Stercorarius skua) pellets corresponds to seabird prey species. Marine Pollution Bulletin, 103(1-2), pp. 206-210. (doi:10.1016/j.marpolbul.2015.12.018) (PMID:26763326)

Davies, G.M., Domenech-Jardi, R., Gray, A. and Johnson, P.C.D. (2016) Vegetation structure and fire weather influence variation in burn severity and fuel consumption during peatland wildfires. Biogeosciences, 12(18), pp. 15737-15762. (doi:10.5194/bgd-12-15737-2015)

2015

Dridi, M., Lecollinet, S., Orton, R. , Johnson, P. , Rosseel, T., van Borm, S., Lambrecht, B. and Muylkens, B. (2015) Next generation sequencing shows West Nile virus quasispecies diversification after a single passage in a carrion crow (Corvus corone) in vivo infection model. Journal of General Virology, 96, p. 2999. (doi:10.1099/jgv.0.000231) (PMID:26297666)

Johnson, P. C. D. , Barry, S. J. E. , Ferguson, H. M. and Müller, P. (2015) Power analysis for generalized linear mixed models in ecology and evolution. Methods in Ecology and Evolution, 6(2), pp. 133-142. (doi:10.1111/2041-210X.12306) (PMID:25893088) (PMCID:PMC4394709)

Wade, K. H. et al. (2015) Variation in the SLC23A1 gene does not influence cardiometabolic outcomes to the extent expected given its association with L-ascorbic acid. American Journal of Clinical Nutrition, 101(1), pp. 202-209. (doi:10.3945/ajcn.114.092981) (PMID:25527764) (PMCID:PMC4266888)

Swerdlow, D. I. et al. (2015) HMG-coenzyme A reductase inhibition, type 2 diabetes, and bodyweight: evidence from genetic analysis and randomised trials. Lancet, 385(9965), pp. 351-361. (doi:10.1016/S0140-6736(14)61183-1) (PMID:25262344) (PMCID:PMC4322187)

Johnson, P. C.D. et al. (2015) Modeling HLA associations with EBV-positive and -negative Hodgkin lymphoma suggests distinct mechanisms in disease pathogenesis. International Journal of Cancer, 137(5), pp. 1066-1075. (doi:10.1002/ijc.29467) (PMID:25648508)

Kreppel, K.S., Johnson, P.C.D. , Govella, N.J., Pombi, M., Maliti, D. and Ferguson, H.M. (2015) Comparative evaluation of the sticky-resting-box-trap, the standardised resting-bucket-trap and indoor aspiration for sampling malaria vectors. Parasites and Vectors, 8, 462. (doi:10.1186/s13071-015-1066-0) (PMID:26383620) (PMCID:PMC4573490)

Mair, C., Stear, M., Johnson, P. , Denwood, M., Jimenez de Cisneros, J. P., Stefan, T. and Matthews, L. (2015) A Bayesian generalized random regression model for estimating heritability using overdispersed count data. Genetics Selection Evolution, 47, 51. (doi:10.1186/s12711-015-0125-5) (PMID:26092676) (PMCID:PMC4473853)

Maliti, D., Govella, N., Killeen, G., Mirzai, N., Johnson, P. C.D. , Kreppel, K. and Ferguson, H. M. (2015) Development and evaluation of mosquito-electrocuting traps as alternatives to the human landing catch technique for sampling host-seeking malaria vectors. Malaria Journal, 14, 502. (doi:10.1186/s12936-015-1025-4) (PMID:26670881) (PMCID:PMC4681165)

2014

Ngufor, C., Chouaïbou, M., Tchicaya, E., Loukou, B., Kesse, N., N’Guessan, R., Johnson, P. , Koudou, B. and Rowland, M. (2014) Combining organophosphate-treated wall linings and long-lasting insecticidal nets fails to provide additional control over long-lasting insecticidal nets alone against multiple insecticide-resistant Anopheles gambiae in Côte d’Ivoire: an experimental hut trial. Malaria Journal, 13, 396. (doi:10.1186/1475-2875-13-396) (PMID:25301219) (PMCID:PMC4203900)

Johnson, P. C.D. (2014) Extension of Nakagawa & Schielzeth's R2GLMM to random slopes models. Methods in Ecology and Evolution, 5(9), pp. 944-946. (doi:10.1111/2041-210X.12225) (PMID:25810896) (PMCID:PMC4368045)

Postmus, I. et al. (2014) In search for genetic determinants of clinically meaningful differential cardiovascular event reduction by pravastatin in the PHArmacogenetic study of Statins in the Elderly at risk (PHASE)/PROSPER study. Atherosclerosis, 235(1), pp. 58-64. (doi:10.1016/j.atherosclerosis.2014.04.009)

de Wet, C., O'Donnell, C. , Johnson, P. and Bowie, P. (2014) Measuring harm. In: Bowie, P. and de Wet, C. (eds.) Safety and Improvement in Primary Care: The Essential Guide. Radcliffe Publishing: London, pp. 40-47. ISBN 9781846195808

Edi, C. A.V. et al. (2014) Long-term trends in Anopheles gambiae insecticide resistance in Côte d’Ivoire. Parasites and Vectors, 7(500), (doi:10.1186/s13071-014-0500-z) (PMID:25429888) (PMCID:PMC4269959)

Gorman, M., Khan, M. A.A., Johnson, P. C.D. , Hart, A. and Mathew, B. (2014) A model for lentigo maligna recurrence using melanocyte count as a predictive marker based upon logistic regression analysis of a blinded retrospective review. Journal of Plastic, Reconstructive and Aesthetic Surgery, 67(10), pp. 1322-1332. (doi:10.1016/j.bjps.2014.05.058)

Ngufor, C., Tchicaya, E., Koudou, B., N'Fale, S., Dabire, R., Johnson, P. , Ranson, H. and Rowland, M. (2014) Combining organophosphate treated wall linings and long-lasting insecticidal nets for improved control of pyrethroid resistant anopheles gambiae. PLoS ONE, 9(1), e83897. (doi:10.1371/journal.pone.0083897) (PMID:24409286) (PMCID:PMC3883662)

Puckering, C. et al. (2014) Association between parent-infant interactions in infancy and disruptive behaviour disorders at age seven: a nested, case-control ALSPAC study. BMC Pediatrics, 14(223), (doi:10.1186/1471-2431-14-223)

Thomson, R. M., Allely, C. S., Purves, D., Puckering, C., McConnachie, A. , Johnson, P. C.D. , Golding, J., Gillberg, C. and Wilson, P. (2014) Predictors of positive and negative parenting behaviours: evidence from the ALSPAC cohort. BMC Pediatrics, 14(247), (doi:10.1186/1471-2431-14-247)

2013

Scott, R.A. et al. (2013) Large-scale association analyses identify new loci influencing glycemic traits and provide insight into the underlying biological pathways. Nature Genetics, 44(9), pp. 991-1005. (doi:10.1038/ng.2385)

Allely, C.S., Purves, D., McConnachie, A. , Marwick, H., Johnson, P.C.D. , Doolin, O., Puckering, C., Golding, J., Gillberg, C. and Wilson, P. (2013) Parent–infant vocalisations at 12 months predict psychopathology at 7 years. Research in Developmental Disabilities, 34(3), pp. 985-993. (doi:10.1016/j.ridd.2012.11.024)

Marwick, H., Doolin, O., Allely, C.S., McConnachie, A. , Johnson, P.C.D. , Puckering, C., Golding, J., Gillberg, C. and Wilson, P. (2013) Predictors of diagnosis of child psychiatric disorder in adult–infant social-communicative interaction at 12 months. Research in Developmental Disabilities, 34(1), pp. 562-572. (doi:10.1016/j.ridd.2012.09.007)

Allely, C.S., Johnson, P.C.D. , Marwick, H., Lidstone, E., Kočovská, E., Puckering, C., McConnachie, A. , Golding, J., Gillberg, C. and Wilson, P. (2013) Prediction of 7-year psychopathology from mother-infant joint attention behaviours: a nested case–control study. BMC Pediatrics, 13(1), p. 147. (doi:10.1186/1471-2431-13-147)

Johnson, P.C.D. , Ahamat, B., McConnachie, A. , Puckering, C., Marwick, H., Furnivall, D., Marwick, R., Gillberg, C. , Heron, J. and Wilson, P. (2013) Motor activity at age one year does not predict ADHD at seven years. International Journal of Methods in Psychiatric Research, 23(1), pp. 9-18. (doi:10.1002/mpr.1436) (PMID:24496957)

McArthur, K.S., Johnson, P.C.D. , Quinn, T. , Higgins, P., Langhorne, P. , Walters, M.R. , Weir, C.J., Dawson, J. and Lees, K.R. (2013) Improving the efficiency of stroke trials: feasibility and efficacy of group adjudication of functional end points. Stroke, 14(12), pp. 3422-3428. (doi:10.1161/STROKEAHA.113.002266)

de Wet, C., Johnson, P.C.D. , O'Donnell, C. and Bowie, P. (2013) Can we quantify harm in general practice records? An assessment of precision and power using computer simulation. BMC Medical Research Methodology, 13(39), (doi:10.1186/1471-2288-13-39)

2012

Tyrrell, J. et al. (2012) Genetic variation in the 15q25 nicotinic acetylcholine receptor gene cluster (CHRNA5-CHRNA3-CHRNB4) interacts with maternal self-reported smoking status during pregnancy to influence birth weight. Human Molecular Genetics, 21(24), pp. 5344-5358. (doi:10.1093/hmg/dds372)

Kulkarni, S., Johnson, P.C.D. , Keatles, S. and Kasthuri, R.S. (2012) Music during interventional radiological procedures, effect on sedation, pain and anxiety: a randomised controlled trial. British Journal of Radiology, 85, pp. 1059-1063. (doi:10.1259/bjr/71897605)

Munafo, M.R. et al. (2012) Association between genetic variants on chromosome 15q25 locus and objective measures of tobacco exposure. Journal of the National Cancer Institute, 104(10), pp. 740-748. (doi:10.1093/jnci/djs191)

De Wet, C., Johnson, P.C.D. , Mash, R., McConnachie, A. and Bowie, P. (2012) Measuring perceptions of safety climate in primary care: a cross-sectional study. Journal of Evaluation in Clinical Practice, 18(1), pp. 135-142. (doi:10.1111/j.1365-2753.2010.01537.x)

McGuinness, D. et al. (2012) Socio-economic status is associated with epigenetic differences in the pSoBid cohort. International Journal of Epidemiology, 41(1), pp. 151-160. (doi:10.1093/ije/dyr215)

Johnson, P.C.D. , Logue, J. , McConnachie, A. , Abu-Rmeileh, N.M.E., Hart, C. , Upton, M.N., Lean, M.E.J. , Sattar, N. and Watt, G. (2012) Intergenerational change and familial aggregation of body mass index. European Journal of Epidemiology, 27(1), pp. 53-61. (doi:10.1007/s10654-011-9639-5)

Jones, C.M., Sanou, A., Guelbeogo, W.M., Sagnon, N., Johnson, P.C.D. and Ranson, H. (2012) Aging partially restores the efficacy of malaria vector control in insecticide-resistant populations of Anopheles gambiae s.l. from Burkina Faso. Malaria Journal, 11(24), (doi:10.1186/1475-2875-11-24)

Manning, A.K. et al. (2012) A genome-wide approach accounting for body mass index identifies genetic variants influencing fasting glycemic traits and insulin resistance. Nature Genetics, 44, pp. 659-669. (doi:10.1038/ng.2274)

Williamson, A.E., Johnson, P.C.D. , Mullen, K. and Wilson, P. (2012) The disappearance of the "revolving door" patient in Scottish general practice: successful policies. BMC Family Practice, 13(1), p. 95. (doi:10.1186/1471-2296-13-95)

2011

Freathy, R.M. et al. (2011) Genetic variation at CHRNA5-CHRNA3-CHRNB4 interacts with smoking status to influence body mass index. International Journal of Epidemiology, 40(6), pp. 1617-28. (doi:10.1093/ije/dyr077)

Smith, V.S., Ford, T., Johnson, K.P., Johnson, P.C.D. , Yoshizawa, K. and Light, J.E. (2011) Multiple lineages of lice pass through the K-Pg boundary. Biology Letters, 7(5), pp. 782-785. (doi:10.1098/rsbl.2011.0105)

Inverarity, D., Diggle, M., Ure, R., Johnson, P.C.D. , Altstadt, P., Mitchell, T.J., Edwards, G. and Santana-Hernandez, D. (2011) Molecular epidemiology and genetic diversity of pneumococcal carriage among children in Beni State, Bolivia. Transactions of the Royal Society of Tropical Medicine and Hygiene, 105(8), pp. 445-451. (doi:10.1016/j.trstmh.2011.04.013)

Adam, A., Webster, L.M.I., Mullen, W., Keller, L.F. and Johnson, P.C.D. (2011) Quantifying fenbendazole and its metabolites in self-medicating wild red grouse Lagopus lagopus scoticus using an HPLC–MS–MS approach. Veterinary Parasitology, 177(3-4), pp. 383-386. (doi:10.1016/j.vetpar.2010.12.013)

Shiels, P.G. et al. (2011) Accelerated telomere attrition is associated with relative household income, diet and inflammation in the pSoBid cohort. PLoS ONE, 6(7), e22521. (doi:10.1371/journal.pone.0022521)

2010

Timpson, N.J. et al. (2010) Genetic variation at the SLC23A1 locus is associated with circulating concentrations of L-ascorbic acid (vitamin C): evidence from 5 independent studies with >15,000 participants. American Journal of Clinical Nutrition, 92(2), pp. 375-382. (doi:10.3945/ajcn.2010.29438)

Johnson, P.C.D. , Hadfield, J.D., Webster, L.M.I., Adam, A., Mable, B.K. and Keller, L.F. (2010) Bayesian paternity analysis and mating patterns in a parasitic nematode, Trichostrongylus tenuis. Heredity, 104(6), pp. 573-582. (doi:10.1038/hdy.2009.139)

Hjalgrim, H. et al. (2010) HLA-A alleles and infectious mononucleosis suggest a critical role for cytotoxic T-cell response in EBV-related Hodgkin lymphoma. Proceedings of the National Academy of Sciences of the United States of America, 107(14), pp. 6400-6405. (doi:10.1073/pnas.0915054107)

Veitch, N.J., Johnson, P.C.D. , Trivedi, U., Terry, S., Wildridge, D. and MacLeod, A. (2010) Digital gene expression analysis of two life cycle stages of the human-infective parasite, Trypanosoma brucei gambiense reveals differentially expressed clusters of co-regulated genes. BMC Medical Genomics, 11, p. 124. (doi:10.1186/1471-2164-11-124)

Wade, A.G., Johnson, P.C.D. and McConnachie, A. (2010) Antidepressant treatment and cultural differences: a survey of the attitudes of physicians and patients in Sweden and Turkey. BMC Family Practice, 11(93), (doi:10.1186/1471-2296-11-93)

de Wet, C., Spence, W., Mash, R., Johnson, P.C.D. and Bowie, P. (2010) The development and psychometric evaluation of a safety climate measure for primary care. Quality and Safety in Health Care, 19(6), pp. 578-584. (doi:10.1136/qshc.2008.031062)

2009

Temperley, N.D., Webster, L.M.I., Adam, A., Keller, L. and Johnson, P.C.D. (2009) Cross-species utility of microsatellite markers in trichostrongyloid nematodes. Journal of Parasitology, 95(2), pp. 487-489. (doi:10.1645/GE-1624.1)

Wilson, R., Spiers, A., Ewan, J., Johnson, P.C.D. , Jenkins, C. and Carr, S. (2009) Effects of high dose oestrogen therapy on circulating inflammatory markers. Maturitas, 62(3), pp. 281-286. (doi:10.1016/j.maturitas.2009.01.009)

2008

Webster, L.M.I., Johnson, P.C.D. , Adam, A., Mable, B.K. and Keller, L.F. (2008) Absence of three known benzimidazole resistance mutations in Trichostrongylus tenuis, a nematode parasite of avian hosts. Veterinary Parasitology, 158(4), pp. 302-310. (doi:10.1016/j.vetpar.2008.09.029)

2007

Johnson, P.C.D. and Haydon, D.T. (2007) Software for quantifying and simulating microsatellite genotyping error. Bioinformatics and Biology Insights, 1, pp. 71-75.

Webster, L.M.I., Johnson, P.C.D. , Adam, A., Mable, B.K. and Keller, L.F. (2007) Macrogeographic population structure in a parasitic nematode with avian hosts. Veterinary Parasitology, 144(1-2), pp. 93-103. (doi:10.1016/j.vetpar.2006.09.027)

Johnson, P.C.D. and Haydon, D.T. (2007) Maximum-likelihood estimation of allelic dropout and false allele error rates from microsatellite genotypes in the absence of reference data. Genetics, 175(2), pp. 827-842.

2006

Johnson, P.C.D. , Webster, L.M.I., Adam, A., Buckland, R., Dawson, D.A. and Keller, L.F. (2006) Abundant variation in microsatellites of the parasitic nematode Trichostrongylus tenuis and linkage to a tandem repeat. Molecular and Biochemical Parasitology, 148(2), pp. 210-218. (doi:10.1016/j.molbiopara.2006.04.011)

2005

Seddon, N., Amos, W., Adcock, G., Johnson, P.C.D. , Kraaijeveld, K., Kraaijeveld-Smit, F.J.L., Lee, W., Senapathi, G.D., Mulder, R.A. and Tobias, J.A. (2005) Mating system, philopatry and patterns of kinship in the cooperatively breeding subdesert mesite Monias benschi. Molecular Ecology, 14(11), pp. 3573-3583. (doi:10.1111/j.1365-294X.2005.02675.x)

Johnson, P.C.D. , Fowlie, M.K. and Amos, W. (2005) Isolation of microsatellite loci from the common buzzard, Buteo buteo (Aves: Accipitridae). Molecular Ecology, 5(2), pp. 208-211. (doi:10.1111/j.1471-8286.2005.00878.x)

2003

Waldick, R.C., Johnson, P.C.D. and Pemberton, J. (2003) Identification and characterization of 14 polymorphic microsatellite loci for a member of the Herpestidae (Mungos mungo). Molecular Ecology Notes, 3(2), pp. 236-238. (doi:10.1046/j.1471-8286.2003.00409.x)

2002

Johnson, P.C.D. , Whitfield, J.A., Foster, W.A. and Amos, W. (2002) Clonal mixing in the soldier-producing aphid Pemphigus spyrothecae (Hemiptera: Aphididae). Molecular Ecology, 11(8), pp. 1525-1531. (doi:10.1046/j.1365-294X.2002.01530.x)

2001

Doncaster, C.P., Rondinini, C. and Johnson, P.C.D. (2001) Field test for environmental correlates of dispersal in hedgehogs Erinaceus europaeus. Journal of Animal Ecology, 70(1), pp. 33-46. (doi:10.1111/j.1365-2656.2001.00471.x)

2000

Johnson, P.C.D. , Llewellyn, K.E.S. and Amos, W. (2000) Microsatellite loci for studying clonal mixing, population structure and inbreeding in a social aphid, Pemphigus spyrothecae (Hemiptera: Pemphigidae). Molecular Ecology, 9(9), pp. 1445-1446. (doi:10.1046/j.1365-294x.2000.01017-8.x)

This list was generated on Thu Feb 21 10:40:37 2019 GMT.
Number of items: 71.

Articles

Millins, C. et al. (2018) Landscape structure affects the prevalence and distribution of a tick-borne zoonotic pathogen. Parasites and Vectors, 11, 621. (doi:10.1186/s13071-018-3200-2) (PMID:30514350) (PMCID:PMC6278045)

Sambo, M., Hampson, K. , Changalucha, J., Cleaveland, S. , Lembo, T. , Lushasi, K., Mbunda, E., Mtema, Z., Sikana, L. and Johnson, P. C.D. (2018) Estimating the size of dog populations in Tanzania to inform rabies control. Veterinary Sciences, 5(3), 77. (doi:10.3390/vetsci5030077)

Nakagawa, S., Johnson, P. C.D. and Schielzeth, H. (2017) The coefficient of determination R2 and intra-class correlation coefficient from generalized linear mixed-effects models revisited and expanded. Journal of the Royal Society: Interface, 14(134), 20170213. (doi:10.1098/rsif.2017.0213) (PMID:28904005) (PMCID:PMC5636267)

Sambo, M. et al. (2017) Comparing methods of assessing dog rabies vaccination coverage in rural and urban communities in Tanzania. Frontiers in Veterinary Science, 4, 33. (doi:10.3389/fvets.2017.00033) (PMID:28352630) (PMCID:PMC5348529)

Millins, C. , Gilbert, L., Johnson, P. , James, M., Kilbride, E., Birtles, R. and Biek, R. (2016) Heterogeneity in the abundance and distribution of Ixodes ricinus and Borrelia burgdorferi (sensu lato) in Scotland: implications for risk prediction. Parasites and Vectors, 9, 595. (doi:10.1186/s13071-016-1875-9) (PMID:27876087) (PMCID:PMC5084683)

Maliti, D. V., Govella, N. J., Killeen, G. F., Mirzai, N., Johnson, P. C.D. , Kreppel, K. and Ferguson, H. M. (2016) Erratum to: Development and evaluation of mosquito-electrocuting traps as alternatives to the human landing catch technique for sampling host-seeking malaria vectors. Malaria Journal, 15, 558. (doi:10.1186/s12936-016-1562-5) (PMID:27846883) (PMCID:PMC5111336)

Govella, N. J., Maliti, D. F., Mlwale, A. T., Massallu, J. P., Mirzai, N., Johnson, P. C.D. , Ferguson, H. M. and Killeen, G. F. (2016) An improved mosquito electrocuting trap that safely reproduces epidemiologically relevant metrics of mosquito human-feeding behaviours as determined by human landing catch. Malaria Journal, 15, 465. (doi:10.1186/s12936-016-1513-1)

Melville, C. A. , Johnson, P. C. D. , Smiley, E., Simpson, N., Purves, D., McConnachie, A. and Cooper, S.-A. (2016) Problem behaviours and symptom dimensions of psychiatric disorders in adults with intellectual disabilities: An exploratory and confirmatory factor analysis. Research in Developmental Disabilities, 55, pp. 1-13. (doi:10.1016/j.ridd.2016.03.007) (PMID:27018744)

Melville, C.A. , Johnson, P.C.D. , Smiley, E., Simpson, N., McConnachie, A. , Purves, D., Osugo, M. and Cooper, S.-A. (2016) Statistical modelling studies examining the dimensional structure of psychopathology experienced by adults with intellectual disabilities: Systematic review. Research in Developmental Disabilities, 53-54, pp. 1-10. (doi:10.1016/j.ridd.2016.01.018) (PMID:26852278)

Reynolds, A., Lindstrom, J., Johnson, P. C.D. and Mable, B. K. (2016) Evolution of drug-tolerant nematode populations in response to density reduction. Evolutionary Applications, 9(5), pp. 726-738. (doi:10.1111/eva.12376) (PMID:27247622) (PMCID:PMC4869413)

Clarke, A. T., Johnson, P. C.D. , Hall, G. C., Ford, I. and Mills, P. (2016) High dose atorvastatin associated with increased risk of significant hepatotoxicity in comparison to simvastatin in UK GPRD cohort. PLoS ONE, 11(3), e0151587. (doi:10.1371/journal.pone.0151587) (PMID:26983033) (PMCID:PMC4794178)

Trewby, H. et al. (2016) Use of bacterial whole-genome sequencing to investigate local persistence and spread in bovine tuberculosis. Epidemics, 14, pp. 26-35. (doi:10.1016/j.epidem.2015.08.003) (PMID:26972511) (PMCID:PMC4773590)

Hammer, S. , Nager, R.G. , Johnson, P.C.D. , Furness, R.W. and Provencher, J.F. (2016) Plastic debris in great skua (Stercorarius skua) pellets corresponds to seabird prey species. Marine Pollution Bulletin, 103(1-2), pp. 206-210. (doi:10.1016/j.marpolbul.2015.12.018) (PMID:26763326)

Davies, G.M., Domenech-Jardi, R., Gray, A. and Johnson, P.C.D. (2016) Vegetation structure and fire weather influence variation in burn severity and fuel consumption during peatland wildfires. Biogeosciences, 12(18), pp. 15737-15762. (doi:10.5194/bgd-12-15737-2015)

Dridi, M., Lecollinet, S., Orton, R. , Johnson, P. , Rosseel, T., van Borm, S., Lambrecht, B. and Muylkens, B. (2015) Next generation sequencing shows West Nile virus quasispecies diversification after a single passage in a carrion crow (Corvus corone) in vivo infection model. Journal of General Virology, 96, p. 2999. (doi:10.1099/jgv.0.000231) (PMID:26297666)

Johnson, P. C. D. , Barry, S. J. E. , Ferguson, H. M. and Müller, P. (2015) Power analysis for generalized linear mixed models in ecology and evolution. Methods in Ecology and Evolution, 6(2), pp. 133-142. (doi:10.1111/2041-210X.12306) (PMID:25893088) (PMCID:PMC4394709)

Wade, K. H. et al. (2015) Variation in the SLC23A1 gene does not influence cardiometabolic outcomes to the extent expected given its association with L-ascorbic acid. American Journal of Clinical Nutrition, 101(1), pp. 202-209. (doi:10.3945/ajcn.114.092981) (PMID:25527764) (PMCID:PMC4266888)

Swerdlow, D. I. et al. (2015) HMG-coenzyme A reductase inhibition, type 2 diabetes, and bodyweight: evidence from genetic analysis and randomised trials. Lancet, 385(9965), pp. 351-361. (doi:10.1016/S0140-6736(14)61183-1) (PMID:25262344) (PMCID:PMC4322187)

Johnson, P. C.D. et al. (2015) Modeling HLA associations with EBV-positive and -negative Hodgkin lymphoma suggests distinct mechanisms in disease pathogenesis. International Journal of Cancer, 137(5), pp. 1066-1075. (doi:10.1002/ijc.29467) (PMID:25648508)

Kreppel, K.S., Johnson, P.C.D. , Govella, N.J., Pombi, M., Maliti, D. and Ferguson, H.M. (2015) Comparative evaluation of the sticky-resting-box-trap, the standardised resting-bucket-trap and indoor aspiration for sampling malaria vectors. Parasites and Vectors, 8, 462. (doi:10.1186/s13071-015-1066-0) (PMID:26383620) (PMCID:PMC4573490)

Mair, C., Stear, M., Johnson, P. , Denwood, M., Jimenez de Cisneros, J. P., Stefan, T. and Matthews, L. (2015) A Bayesian generalized random regression model for estimating heritability using overdispersed count data. Genetics Selection Evolution, 47, 51. (doi:10.1186/s12711-015-0125-5) (PMID:26092676) (PMCID:PMC4473853)

Maliti, D., Govella, N., Killeen, G., Mirzai, N., Johnson, P. C.D. , Kreppel, K. and Ferguson, H. M. (2015) Development and evaluation of mosquito-electrocuting traps as alternatives to the human landing catch technique for sampling host-seeking malaria vectors. Malaria Journal, 14, 502. (doi:10.1186/s12936-015-1025-4) (PMID:26670881) (PMCID:PMC4681165)

Ngufor, C., Chouaïbou, M., Tchicaya, E., Loukou, B., Kesse, N., N’Guessan, R., Johnson, P. , Koudou, B. and Rowland, M. (2014) Combining organophosphate-treated wall linings and long-lasting insecticidal nets fails to provide additional control over long-lasting insecticidal nets alone against multiple insecticide-resistant Anopheles gambiae in Côte d’Ivoire: an experimental hut trial. Malaria Journal, 13, 396. (doi:10.1186/1475-2875-13-396) (PMID:25301219) (PMCID:PMC4203900)

Johnson, P. C.D. (2014) Extension of Nakagawa & Schielzeth's R2GLMM to random slopes models. Methods in Ecology and Evolution, 5(9), pp. 944-946. (doi:10.1111/2041-210X.12225) (PMID:25810896) (PMCID:PMC4368045)

Postmus, I. et al. (2014) In search for genetic determinants of clinically meaningful differential cardiovascular event reduction by pravastatin in the PHArmacogenetic study of Statins in the Elderly at risk (PHASE)/PROSPER study. Atherosclerosis, 235(1), pp. 58-64. (doi:10.1016/j.atherosclerosis.2014.04.009)

Edi, C. A.V. et al. (2014) Long-term trends in Anopheles gambiae insecticide resistance in Côte d’Ivoire. Parasites and Vectors, 7(500), (doi:10.1186/s13071-014-0500-z) (PMID:25429888) (PMCID:PMC4269959)

Gorman, M., Khan, M. A.A., Johnson, P. C.D. , Hart, A. and Mathew, B. (2014) A model for lentigo maligna recurrence using melanocyte count as a predictive marker based upon logistic regression analysis of a blinded retrospective review. Journal of Plastic, Reconstructive and Aesthetic Surgery, 67(10), pp. 1322-1332. (doi:10.1016/j.bjps.2014.05.058)

Ngufor, C., Tchicaya, E., Koudou, B., N'Fale, S., Dabire, R., Johnson, P. , Ranson, H. and Rowland, M. (2014) Combining organophosphate treated wall linings and long-lasting insecticidal nets for improved control of pyrethroid resistant anopheles gambiae. PLoS ONE, 9(1), e83897. (doi:10.1371/journal.pone.0083897) (PMID:24409286) (PMCID:PMC3883662)

Puckering, C. et al. (2014) Association between parent-infant interactions in infancy and disruptive behaviour disorders at age seven: a nested, case-control ALSPAC study. BMC Pediatrics, 14(223), (doi:10.1186/1471-2431-14-223)

Thomson, R. M., Allely, C. S., Purves, D., Puckering, C., McConnachie, A. , Johnson, P. C.D. , Golding, J., Gillberg, C. and Wilson, P. (2014) Predictors of positive and negative parenting behaviours: evidence from the ALSPAC cohort. BMC Pediatrics, 14(247), (doi:10.1186/1471-2431-14-247)

Scott, R.A. et al. (2013) Large-scale association analyses identify new loci influencing glycemic traits and provide insight into the underlying biological pathways. Nature Genetics, 44(9), pp. 991-1005. (doi:10.1038/ng.2385)

Allely, C.S., Purves, D., McConnachie, A. , Marwick, H., Johnson, P.C.D. , Doolin, O., Puckering, C., Golding, J., Gillberg, C. and Wilson, P. (2013) Parent–infant vocalisations at 12 months predict psychopathology at 7 years. Research in Developmental Disabilities, 34(3), pp. 985-993. (doi:10.1016/j.ridd.2012.11.024)

Marwick, H., Doolin, O., Allely, C.S., McConnachie, A. , Johnson, P.C.D. , Puckering, C., Golding, J., Gillberg, C. and Wilson, P. (2013) Predictors of diagnosis of child psychiatric disorder in adult–infant social-communicative interaction at 12 months. Research in Developmental Disabilities, 34(1), pp. 562-572. (doi:10.1016/j.ridd.2012.09.007)

Allely, C.S., Johnson, P.C.D. , Marwick, H., Lidstone, E., Kočovská, E., Puckering, C., McConnachie, A. , Golding, J., Gillberg, C. and Wilson, P. (2013) Prediction of 7-year psychopathology from mother-infant joint attention behaviours: a nested case–control study. BMC Pediatrics, 13(1), p. 147. (doi:10.1186/1471-2431-13-147)

Johnson, P.C.D. , Ahamat, B., McConnachie, A. , Puckering, C., Marwick, H., Furnivall, D., Marwick, R., Gillberg, C. , Heron, J. and Wilson, P. (2013) Motor activity at age one year does not predict ADHD at seven years. International Journal of Methods in Psychiatric Research, 23(1), pp. 9-18. (doi:10.1002/mpr.1436) (PMID:24496957)

McArthur, K.S., Johnson, P.C.D. , Quinn, T. , Higgins, P., Langhorne, P. , Walters, M.R. , Weir, C.J., Dawson, J. and Lees, K.R. (2013) Improving the efficiency of stroke trials: feasibility and efficacy of group adjudication of functional end points. Stroke, 14(12), pp. 3422-3428. (doi:10.1161/STROKEAHA.113.002266)

de Wet, C., Johnson, P.C.D. , O'Donnell, C. and Bowie, P. (2013) Can we quantify harm in general practice records? An assessment of precision and power using computer simulation. BMC Medical Research Methodology, 13(39), (doi:10.1186/1471-2288-13-39)

Tyrrell, J. et al. (2012) Genetic variation in the 15q25 nicotinic acetylcholine receptor gene cluster (CHRNA5-CHRNA3-CHRNB4) interacts with maternal self-reported smoking status during pregnancy to influence birth weight. Human Molecular Genetics, 21(24), pp. 5344-5358. (doi:10.1093/hmg/dds372)

Kulkarni, S., Johnson, P.C.D. , Keatles, S. and Kasthuri, R.S. (2012) Music during interventional radiological procedures, effect on sedation, pain and anxiety: a randomised controlled trial. British Journal of Radiology, 85, pp. 1059-1063. (doi:10.1259/bjr/71897605)

Munafo, M.R. et al. (2012) Association between genetic variants on chromosome 15q25 locus and objective measures of tobacco exposure. Journal of the National Cancer Institute, 104(10), pp. 740-748. (doi:10.1093/jnci/djs191)

De Wet, C., Johnson, P.C.D. , Mash, R., McConnachie, A. and Bowie, P. (2012) Measuring perceptions of safety climate in primary care: a cross-sectional study. Journal of Evaluation in Clinical Practice, 18(1), pp. 135-142. (doi:10.1111/j.1365-2753.2010.01537.x)

McGuinness, D. et al. (2012) Socio-economic status is associated with epigenetic differences in the pSoBid cohort. International Journal of Epidemiology, 41(1), pp. 151-160. (doi:10.1093/ije/dyr215)

Johnson, P.C.D. , Logue, J. , McConnachie, A. , Abu-Rmeileh, N.M.E., Hart, C. , Upton, M.N., Lean, M.E.J. , Sattar, N. and Watt, G. (2012) Intergenerational change and familial aggregation of body mass index. European Journal of Epidemiology, 27(1), pp. 53-61. (doi:10.1007/s10654-011-9639-5)

Jones, C.M., Sanou, A., Guelbeogo, W.M., Sagnon, N., Johnson, P.C.D. and Ranson, H. (2012) Aging partially restores the efficacy of malaria vector control in insecticide-resistant populations of Anopheles gambiae s.l. from Burkina Faso. Malaria Journal, 11(24), (doi:10.1186/1475-2875-11-24)

Manning, A.K. et al. (2012) A genome-wide approach accounting for body mass index identifies genetic variants influencing fasting glycemic traits and insulin resistance. Nature Genetics, 44, pp. 659-669. (doi:10.1038/ng.2274)

Williamson, A.E., Johnson, P.C.D. , Mullen, K. and Wilson, P. (2012) The disappearance of the "revolving door" patient in Scottish general practice: successful policies. BMC Family Practice, 13(1), p. 95. (doi:10.1186/1471-2296-13-95)

Freathy, R.M. et al. (2011) Genetic variation at CHRNA5-CHRNA3-CHRNB4 interacts with smoking status to influence body mass index. International Journal of Epidemiology, 40(6), pp. 1617-28. (doi:10.1093/ije/dyr077)

Smith, V.S., Ford, T., Johnson, K.P., Johnson, P.C.D. , Yoshizawa, K. and Light, J.E. (2011) Multiple lineages of lice pass through the K-Pg boundary. Biology Letters, 7(5), pp. 782-785. (doi:10.1098/rsbl.2011.0105)

Inverarity, D., Diggle, M., Ure, R., Johnson, P.C.D. , Altstadt, P., Mitchell, T.J., Edwards, G. and Santana-Hernandez, D. (2011) Molecular epidemiology and genetic diversity of pneumococcal carriage among children in Beni State, Bolivia. Transactions of the Royal Society of Tropical Medicine and Hygiene, 105(8), pp. 445-451. (doi:10.1016/j.trstmh.2011.04.013)

Adam, A., Webster, L.M.I., Mullen, W., Keller, L.F. and Johnson, P.C.D. (2011) Quantifying fenbendazole and its metabolites in self-medicating wild red grouse Lagopus lagopus scoticus using an HPLC–MS–MS approach. Veterinary Parasitology, 177(3-4), pp. 383-386. (doi:10.1016/j.vetpar.2010.12.013)

Shiels, P.G. et al. (2011) Accelerated telomere attrition is associated with relative household income, diet and inflammation in the pSoBid cohort. PLoS ONE, 6(7), e22521. (doi:10.1371/journal.pone.0022521)

Timpson, N.J. et al. (2010) Genetic variation at the SLC23A1 locus is associated with circulating concentrations of L-ascorbic acid (vitamin C): evidence from 5 independent studies with >15,000 participants. American Journal of Clinical Nutrition, 92(2), pp. 375-382. (doi:10.3945/ajcn.2010.29438)

Johnson, P.C.D. , Hadfield, J.D., Webster, L.M.I., Adam, A., Mable, B.K. and Keller, L.F. (2010) Bayesian paternity analysis and mating patterns in a parasitic nematode, Trichostrongylus tenuis. Heredity, 104(6), pp. 573-582. (doi:10.1038/hdy.2009.139)

Hjalgrim, H. et al. (2010) HLA-A alleles and infectious mononucleosis suggest a critical role for cytotoxic T-cell response in EBV-related Hodgkin lymphoma. Proceedings of the National Academy of Sciences of the United States of America, 107(14), pp. 6400-6405. (doi:10.1073/pnas.0915054107)

Veitch, N.J., Johnson, P.C.D. , Trivedi, U., Terry, S., Wildridge, D. and MacLeod, A. (2010) Digital gene expression analysis of two life cycle stages of the human-infective parasite, Trypanosoma brucei gambiense reveals differentially expressed clusters of co-regulated genes. BMC Medical Genomics, 11, p. 124. (doi:10.1186/1471-2164-11-124)

Wade, A.G., Johnson, P.C.D. and McConnachie, A. (2010) Antidepressant treatment and cultural differences: a survey of the attitudes of physicians and patients in Sweden and Turkey. BMC Family Practice, 11(93), (doi:10.1186/1471-2296-11-93)

de Wet, C., Spence, W., Mash, R., Johnson, P.C.D. and Bowie, P. (2010) The development and psychometric evaluation of a safety climate measure for primary care. Quality and Safety in Health Care, 19(6), pp. 578-584. (doi:10.1136/qshc.2008.031062)

Temperley, N.D., Webster, L.M.I., Adam, A., Keller, L. and Johnson, P.C.D. (2009) Cross-species utility of microsatellite markers in trichostrongyloid nematodes. Journal of Parasitology, 95(2), pp. 487-489. (doi:10.1645/GE-1624.1)

Wilson, R., Spiers, A., Ewan, J., Johnson, P.C.D. , Jenkins, C. and Carr, S. (2009) Effects of high dose oestrogen therapy on circulating inflammatory markers. Maturitas, 62(3), pp. 281-286. (doi:10.1016/j.maturitas.2009.01.009)

Webster, L.M.I., Johnson, P.C.D. , Adam, A., Mable, B.K. and Keller, L.F. (2008) Absence of three known benzimidazole resistance mutations in Trichostrongylus tenuis, a nematode parasite of avian hosts. Veterinary Parasitology, 158(4), pp. 302-310. (doi:10.1016/j.vetpar.2008.09.029)

Johnson, P.C.D. and Haydon, D.T. (2007) Software for quantifying and simulating microsatellite genotyping error. Bioinformatics and Biology Insights, 1, pp. 71-75.

Webster, L.M.I., Johnson, P.C.D. , Adam, A., Mable, B.K. and Keller, L.F. (2007) Macrogeographic population structure in a parasitic nematode with avian hosts. Veterinary Parasitology, 144(1-2), pp. 93-103. (doi:10.1016/j.vetpar.2006.09.027)

Johnson, P.C.D. and Haydon, D.T. (2007) Maximum-likelihood estimation of allelic dropout and false allele error rates from microsatellite genotypes in the absence of reference data. Genetics, 175(2), pp. 827-842.

Johnson, P.C.D. , Webster, L.M.I., Adam, A., Buckland, R., Dawson, D.A. and Keller, L.F. (2006) Abundant variation in microsatellites of the parasitic nematode Trichostrongylus tenuis and linkage to a tandem repeat. Molecular and Biochemical Parasitology, 148(2), pp. 210-218. (doi:10.1016/j.molbiopara.2006.04.011)

Seddon, N., Amos, W., Adcock, G., Johnson, P.C.D. , Kraaijeveld, K., Kraaijeveld-Smit, F.J.L., Lee, W., Senapathi, G.D., Mulder, R.A. and Tobias, J.A. (2005) Mating system, philopatry and patterns of kinship in the cooperatively breeding subdesert mesite Monias benschi. Molecular Ecology, 14(11), pp. 3573-3583. (doi:10.1111/j.1365-294X.2005.02675.x)

Johnson, P.C.D. , Fowlie, M.K. and Amos, W. (2005) Isolation of microsatellite loci from the common buzzard, Buteo buteo (Aves: Accipitridae). Molecular Ecology, 5(2), pp. 208-211. (doi:10.1111/j.1471-8286.2005.00878.x)

Waldick, R.C., Johnson, P.C.D. and Pemberton, J. (2003) Identification and characterization of 14 polymorphic microsatellite loci for a member of the Herpestidae (Mungos mungo). Molecular Ecology Notes, 3(2), pp. 236-238. (doi:10.1046/j.1471-8286.2003.00409.x)

Johnson, P.C.D. , Whitfield, J.A., Foster, W.A. and Amos, W. (2002) Clonal mixing in the soldier-producing aphid Pemphigus spyrothecae (Hemiptera: Aphididae). Molecular Ecology, 11(8), pp. 1525-1531. (doi:10.1046/j.1365-294X.2002.01530.x)

Doncaster, C.P., Rondinini, C. and Johnson, P.C.D. (2001) Field test for environmental correlates of dispersal in hedgehogs Erinaceus europaeus. Journal of Animal Ecology, 70(1), pp. 33-46. (doi:10.1111/j.1365-2656.2001.00471.x)

Johnson, P.C.D. , Llewellyn, K.E.S. and Amos, W. (2000) Microsatellite loci for studying clonal mixing, population structure and inbreeding in a social aphid, Pemphigus spyrothecae (Hemiptera: Pemphigidae). Molecular Ecology, 9(9), pp. 1445-1446. (doi:10.1046/j.1365-294x.2000.01017-8.x)

Book Sections

de Wet, C., O'Donnell, C. , Johnson, P. and Bowie, P. (2014) Measuring harm. In: Bowie, P. and de Wet, C. (eds.) Safety and Improvement in Primary Care: The Essential Guide. Radcliffe Publishing: London, pp. 40-47. ISBN 9781846195808

This list was generated on Thu Feb 21 10:40:37 2019 GMT.