Mr Andrej Aderhold
- Honorary Research Fellow (School of Mathematics & Statistics)
email:
Andrej.Aderhold@glasgow.ac.uk
Mathematics & Statistics, Room 303
Publications
2019
Grzegorczyk, M., Aderhold, A. and Husmeier, D. (2019) Overview and evaluation of recent methods for statistical inference of gene regulatory networks from time series data. In: Sanguinetti, G. and Huynh-Thu, V. A. (eds.) Gene Regulatory Networks: Methods and Protocols. Series: Methods in molecular biology (1883). Humana Press: New York, NY, pp. 49-94. (doi: 10.1007/978-1-4939-8882-2_3)
2017
Aderhold, A., Husmeier, D. and Grzegorczyk, M. (2017) Approximate Bayesian inference in semi-mechanistic models. Statistics and Computing, 27(4), pp. 1003-1040. (doi: 10.1007/s11222-016-9668-8)
Gao, H. , Aderhold, A., Mangion, K., Luo, X. , Husmeier, D. and Berry, C. (2017) Changes and classification in myocardial contractile function in the left ventricle following acute myocardial infarction. Journal of the Royal Society: Interface, 14(132), 20170203. (doi: 10.1098/rsif.2017.0203) (PMID:28747397) (PMCID:PMC5550971)
Grzegorczyk, M., Aderhold, A. and Husmeier, D. (2017) Targeting Bayes factors with direct-path non-equilibrium thermodynamic integration. Computational Statistics, 32(2), pp. 717-761. (doi: 10.1007/s00180-017-0721-7)
2016
Aderhold, A., Smith, V. A. and Husmeier, D. (2016) Biological network inference at multiple scales: from gene regulation to species interactions. In: Elloumi, M., Iliopoulos, C. S., Wang, J. T.L. and Zomaya, A. Y. (eds.) Pattern Recognition in Computational Molecular Biology. Series: Wiley series on bioinformatics: computational techniques and engineering. John Wiley & Sons: New Jersey, United States, pp. 525-554. ISBN 9781118893685
2015
Grzegorczyk, M., Aderhold, A. and Husmeier, D. (2015) Network Reconstruction with Realistic Models. In: 30th International Workshop on Statistical Modelling, Linz, Austria, 06-10 Jul 2015,
Grzegorczyk, M., Aderhold, A. and Husmeier, D. (2015) Inferring bi-directional interactions between circadian clock genes and metabolism with model ensembles. Statistical Applications in Genetics and Molecular Biology, 14(2), pp. 143-167. (doi: 10.1515/sagmb-2014-0041) (PMID:25719342)
2014
Grzegorczyk, M., Aderhold, A., Smith, V. A. and Husmeier, D. (2014) Inference of circadian regulatory networks. In: Ortuno, F. and Rojas, I. (eds.) International Work-Conference on Bioinformatics and Biomedical Engineering. Copicentro Granada S.L: Granada, pp. 1001-1014. ISBN 9788415814849
Articles
Aderhold, A., Husmeier, D. and Grzegorczyk, M. (2017) Approximate Bayesian inference in semi-mechanistic models. Statistics and Computing, 27(4), pp. 1003-1040. (doi: 10.1007/s11222-016-9668-8)
Gao, H. , Aderhold, A., Mangion, K., Luo, X. , Husmeier, D. and Berry, C. (2017) Changes and classification in myocardial contractile function in the left ventricle following acute myocardial infarction. Journal of the Royal Society: Interface, 14(132), 20170203. (doi: 10.1098/rsif.2017.0203) (PMID:28747397) (PMCID:PMC5550971)
Grzegorczyk, M., Aderhold, A. and Husmeier, D. (2017) Targeting Bayes factors with direct-path non-equilibrium thermodynamic integration. Computational Statistics, 32(2), pp. 717-761. (doi: 10.1007/s00180-017-0721-7)
Grzegorczyk, M., Aderhold, A. and Husmeier, D. (2015) Inferring bi-directional interactions between circadian clock genes and metabolism with model ensembles. Statistical Applications in Genetics and Molecular Biology, 14(2), pp. 143-167. (doi: 10.1515/sagmb-2014-0041) (PMID:25719342)
Book Sections
Grzegorczyk, M., Aderhold, A. and Husmeier, D. (2019) Overview and evaluation of recent methods for statistical inference of gene regulatory networks from time series data. In: Sanguinetti, G. and Huynh-Thu, V. A. (eds.) Gene Regulatory Networks: Methods and Protocols. Series: Methods in molecular biology (1883). Humana Press: New York, NY, pp. 49-94. (doi: 10.1007/978-1-4939-8882-2_3)
Aderhold, A., Smith, V. A. and Husmeier, D. (2016) Biological network inference at multiple scales: from gene regulation to species interactions. In: Elloumi, M., Iliopoulos, C. S., Wang, J. T.L. and Zomaya, A. Y. (eds.) Pattern Recognition in Computational Molecular Biology. Series: Wiley series on bioinformatics: computational techniques and engineering. John Wiley & Sons: New Jersey, United States, pp. 525-554. ISBN 9781118893685
Grzegorczyk, M., Aderhold, A., Smith, V. A. and Husmeier, D. (2014) Inference of circadian regulatory networks. In: Ortuno, F. and Rojas, I. (eds.) International Work-Conference on Bioinformatics and Biomedical Engineering. Copicentro Granada S.L: Granada, pp. 1001-1014. ISBN 9788415814849
Conference Proceedings
Grzegorczyk, M., Aderhold, A. and Husmeier, D. (2015) Network Reconstruction with Realistic Models. In: 30th International Workshop on Statistical Modelling, Linz, Austria, 06-10 Jul 2015,
Research datasets
2016
Aderhold, A., Husmeier, D. and Grzegorczyk, M. (2016) Approximate Bayesian inference in semi-mechanistic models. [Data Collection]
Aderhold, A., Husmeier, D. and Grzegorczyk, M. (2016) Hierarchical Bayesian Regression (HBR) and Analytic Gradient Calculation (GCGP). [Data Collection]