2024

Bibi, S., Kerbiriou, C., Khan, U., Mckirdy, S., Kostrytsia, A. , Rasheed, H., Eqani, S. A. M. A. S., Gerasimidis, K. , Nurulain, S. M. and Ijaz, U. Z. (2024) Gut microbiome and function are altered for individuals living in high fluoride concentration areas in Pakistan. Ecotoxicology and Environmental Safety, (Accepted for Publication)

Shi, X. et al. (2024) Microbial stratification and DOM removal in drinking water biofilters: implications for enhanced performance. Water Research, (doi: 10.1016/j.watres.2024.122053) (Early Online Publication)

Gupta, R., Hajabdollahi Ouderji, Z., Uzma, , Yu, Z. , Sloan, W. T. and You, S. (2024) Machine learning for sustainable organic waste treatment: a critical review. npj Materials Sustainability, 2, 5. (doi: 10.1038/s44296-024-00009-9)

2023

Ameer, A., Cheng, Y., Saleem, F., Uzma, , McKenna, A., Richmond, A., Gundogdu, O., Sloan, W. T. , Javed, S. and Ijaz, U. Z. (2023) Temporal stability and community assembly mechanisms in healthy broiler cecum. Frontiers in Microbiology, 14, 1197838. (doi: 10.3389/fmicb.2023.1197838) (PMID:37779716) (PMCID:PMC10534011)

Uzma, , Manzoor, U. and Halim, Z. (2023) Protein encoder: an autoencoder-based ensemble feature selection scheme to predict protein secondary structure. Expert Systems with Applications, 213(Part B), 119081. (doi: 10.1016/j.eswa.2022.119081)

2022

Uzma, , Al-Obeidat, F., Tubaishat, A., Shah, B. and Halim, Z. (2022) Gene encoder: a feature selection technique through unsupervised deep learning-based clustering for large gene expression data. Neural Computing and Applications, 34(11), pp. 8309-8331. (doi: 10.1007/s00521-020-05101-4)

2021

Uzma, and Halim, Z. (2021) An ensemble filter-based heuristic approach for cancerous gene expression classification. Knowledge-Based Systems, 234, 107560. (doi: 10.1016/j.knosys.2021.107560)

Halim, Z., Sargana, H. M., Aadam, , Uzma, and Waqas, M. (2021) Clustering of graphs using pseudo-guided random walk. Journal of Computational Science, 51, 101281. (doi: 10.1016/j.jocs.2020.101281)

2020

Uzma, and Halim, Z. (2020) Optimizing the DNA fragment assembly using metaheuristic-based overlap layout consensus approach. Applied Soft Computing, 92, 106256. (doi: 10.1016/j.asoc.2020.106256)

2018

Halim, Z. and Uzma, (2018) Optimizing the minimum spanning tree-based extracted clusters using evolution strategy. Cluster Computing, 21(1), pp. 377-391. (doi: 10.1007/s10586-017-0868-6)

Articles

Bibi, S., Kerbiriou, C., Khan, U., Mckirdy, S., Kostrytsia, A. , Rasheed, H., Eqani, S. A. M. A. S., Gerasimidis, K. , Nurulain, S. M. and Ijaz, U. Z. (2024) Gut microbiome and function are altered for individuals living in high fluoride concentration areas in Pakistan. Ecotoxicology and Environmental Safety, (Accepted for Publication)

Shi, X. et al. (2024) Microbial stratification and DOM removal in drinking water biofilters: implications for enhanced performance. Water Research, (doi: 10.1016/j.watres.2024.122053) (Early Online Publication)

Gupta, R., Hajabdollahi Ouderji, Z., Uzma, , Yu, Z. , Sloan, W. T. and You, S. (2024) Machine learning for sustainable organic waste treatment: a critical review. npj Materials Sustainability, 2, 5. (doi: 10.1038/s44296-024-00009-9)

Ameer, A., Cheng, Y., Saleem, F., Uzma, , McKenna, A., Richmond, A., Gundogdu, O., Sloan, W. T. , Javed, S. and Ijaz, U. Z. (2023) Temporal stability and community assembly mechanisms in healthy broiler cecum. Frontiers in Microbiology, 14, 1197838. (doi: 10.3389/fmicb.2023.1197838) (PMID:37779716) (PMCID:PMC10534011)

Uzma, , Manzoor, U. and Halim, Z. (2023) Protein encoder: an autoencoder-based ensemble feature selection scheme to predict protein secondary structure. Expert Systems with Applications, 213(Part B), 119081. (doi: 10.1016/j.eswa.2022.119081)

Uzma, , Al-Obeidat, F., Tubaishat, A., Shah, B. and Halim, Z. (2022) Gene encoder: a feature selection technique through unsupervised deep learning-based clustering for large gene expression data. Neural Computing and Applications, 34(11), pp. 8309-8331. (doi: 10.1007/s00521-020-05101-4)

Uzma, and Halim, Z. (2021) An ensemble filter-based heuristic approach for cancerous gene expression classification. Knowledge-Based Systems, 234, 107560. (doi: 10.1016/j.knosys.2021.107560)

Halim, Z., Sargana, H. M., Aadam, , Uzma, and Waqas, M. (2021) Clustering of graphs using pseudo-guided random walk. Journal of Computational Science, 51, 101281. (doi: 10.1016/j.jocs.2020.101281)

Uzma, and Halim, Z. (2020) Optimizing the DNA fragment assembly using metaheuristic-based overlap layout consensus approach. Applied Soft Computing, 92, 106256. (doi: 10.1016/j.asoc.2020.106256)

Halim, Z. and Uzma, (2018) Optimizing the minimum spanning tree-based extracted clusters using evolution strategy. Cluster Computing, 21(1), pp. 377-391. (doi: 10.1007/s10586-017-0868-6)