Shared Interest Groups

Zwick, M., Cardoso, J. A., Gutierrez-Zapata, D. M., Cerón-Muñoz, M., Gutierrez, J. F., Raab, C., Jonsson, N., Escobar, M., Roberts, K., Barrett, B. (2024) Pixels to pasture: using machine learning and multispectral remote sensing to predict biomass and nutrient quality in tropical grasslands. Remote Sensing Applications: Society and Environment, (doi: 10.1016/j.rsase.2024.101282)

Ndjim, M. et al. (2024) Tuft cell acetylcholine is released into the gut lumen as an effector and regulator of type 2 immunity, and directly targets helminth parasites. Immunity, 57, pp. 1260-1273.e7. (doi: 10.1016/j.immuni.2024.04.018)

Ribeiro da Silva, S. J., Ferraz de Magalhães, J. J., Matthews, Q., Lot Divarzak, A. L., Germano Mendes, R. P., Rodrigues Santos, B. N., Guerra de Albuquerque Cabral 3,, D., Bezerra da Silva, J., Kohl, A., Pardee, K., Pena, L. (2024) Development and field validation of an RT-LAMP assay for the rapid detection of chikungunya virus in patient and mosquito samples. Clinical Microbiology and Infection, 30, pp. 810-815. (doi: 10.1016/j.cmi.2024.03.004)

Wangrawa, D. W., Odero, J. O., Baldini, F., Okumu, F., Badolo, A. (2024) Distribution and insecticide resistance profile of the major malaria vector Anopheles funestus group across the African continent. Medical and Veterinary Entomology, 38, pp. 119-137. (doi: 10.1111/mve.12706)

Khera, H. K., Valiyaparambil, A., Jagannath, D. K., Viswanath, V. K., Kumar, N., Shukla, J. P., Pradhan, S., Lakshminarasimhan, A. (2024) Nano-differential scanning fluorimetry as a tool for the assessment of refolded antibody fragments: a case study for anti-Pfs25 single-chain antibodies. Biochemical Engineering Journal, 206, (doi: 10.1016/j.bej.2024.109287)

Mwanga, E. P., Kweyamba, P. A., Siria, D. J., Mshani, I. H., Mchola, I. S., Makala, F. E., Seleman, G., Abbasi, S., Mwinyi, S. H., González-Jiménez, M., Wynne, K., Baldini, F., Babayan, S. A., Okumu, F. O. (2024) Reagent-free detection of Plasmodium falciparum malaria infections in field-collected mosquitoes using mid-infrared spectroscopy and machine learning. Scientific Reports, 14, (doi: 10.1038/s41598-024-63082-z)

Odero, J., Nambunga, I. H., Masalu, J. P., Mkandawile, G., Bwanary, H., Hape, E. E., Njalambaha, R. M., Tungu, P., Ngowo, H., Kaindoa, E. W., Mapua, S. A., Kahamba, N. F., Nelli, L., Wondji, C., Koekemoer, L. L., Weetman, D., Ferguson, H., Baldini, F., Okumu, F. (2024) Genetic markers associated with the widespread insecticide resistance in malaria vector Anopheles funestus populations across Tanzania. Parasites and Vectors, 17, (doi: 10.1186/s13071-024-06315-4)

Donald, C. (2024) Dr Claire Donald episode of the Teaching and Scholarship Podcast.

Blanco-Melo, D., Campbell, M. A., Zhu, H., Dennis, T. P., Modha, S., Lytras, S., Hughes, J., Gatseva, A., Gifford, R. J. (2024) A novel approach to exploring the dark genome and its application to mapping of the vertebrate virus fossil record. Genome Biology, 25, (doi: 10.1186/s13059-024-03258-y)

Ortega López, L. D., Betancourth, M. P., Leon, R., Kohl, A., Ferguson, H. M. (2024) Behaviour and distribution of Aedes aegypti mosquitoes and their relation to dengue incidence in two transmission hotspots in coastal Ecuador. PLoS Neglected Tropical Diseases, 18, (doi: 10.1371/journal.pntd.0010932)

Kim, K.-H., Hong, E. P., Lee, Y., McLean, Z. L., Elezi, E., Lee, R., Kwak, S., McAllister, B., Massey, T. H., Lobanov, S., Holmans, P., Orth, M., Ciosi, M., Monckton, D. G., Long, J. D., Lucente, D., Wheeler, V. C., MacDonald, M. E., Gusella, J. F., Lee, J.-M. (2024) Posttranscriptional regulation of FAN1 by miR-124-3p at rs3512 underlies onset-delaying genetic modification in Huntington’s disease. Proceedings of the National Academy of Sciences, 121, (doi: 10.1073/pnas.2322924121)

Dennis, T. P.W., Essandoh, J., Mable, B. K., Viana, M. S., Yawson, A. E., Weetman, D. (2024) Signatures of adaptation at key insecticide resistance loci in Anopheles gambiae in Southern Ghana revealed by reduced-coverage WGS. Scientific Reports, 14, (doi: 10.1038/s41598-024-58906-x)

Donald, C., McCaughey, L. (2024) Enhancing Student’s Mathematical Skills with Smart Worksheets.

Bentley-Abbot, C., Heslop, R., Pirillo, C., Chandrasegaran, P., McConnell, G., Roberts, E., Hutchinson, E., MacLeod, A. (2024) An easy to use tool for the analysis of subcellular mRNA transcript colocalisation in smFISH data. Scientific Reports, 14, (doi: 10.1038/s41598-024-58641-3)

Sollelis, L., Howick, V. M., Marti, M. (2024) Revisiting the determinants of malaria transmission. Trends in Parasitology, 40, pp. 302-312. (doi: 10.1016/j.pt.2024.02.001)

Tandavanitj, R., Setthapramote, C., De Lorenzo, G., Sanchez-Velazquez, R., Clark, J. J., Rocchi, M., McInnes, C., Kohl, A., Patel, A. H. (2024) Virus-like particles of louping ill virus elicit potent neutralizing antibodies targeting multimers of viral envelope protein. Vaccine, 42, pp. 2429-2437. (doi: 10.1016/j.vaccine.2024.03.008)

Chadwick, F. J., Haydon, D. T., Husmeier, D., Ovaskainen, O., Matthiopoulos, J. (2024) LIES of omission: complex observation processes in ecology. Trends in Ecology and Evolution, 39, pp. 368-380. (doi: 10.1016/j.tree.2023.10.009)

Mwanga, E. P., Siria, D. J., Mshani, I. H., Mwinyi, S. H., Abbas, S., Gonzalez Jimenez, M., Wynne, K., Baldini, F., Babayan, S. A., Okumu, F. O. (2024) Rapid classification of epidemiologically relevant age categories of the malaria vector, Anopheles funestus. Parasites and Vectors, 17, (doi: 10.1186/s13071-024-06209-5)

Ruiz de Sabando, A., Ciosi, M., Galbete, A., Cumming, S. A., Spanish HD Collaborative Group, , Monckton, D. G., Ramos-Arroyo, M. A. (2024) Somatic CAG repeat instability in intermediate alleles of the HTT gene and its potential association with a clinical phenotype. European Journal of Human Genetics, (doi: 10.1038/s41431-024-01546-6)

Adamson, W. E., Noyes, H., Johnson, P., Cooper, A., Monckton, D. G., Ogunsola, J., Beckett-Hill, G., Sullivan, M., Mark, P., Parekh, R. S., MacLeod, A. (2024) Phenome-wide analysis reveals epistatic associations between APOL1 variants and chronic kidney disease and multiple other disorders. EBioMedicine, 101, (doi: 10.1016/j.ebiom.2024.105000)

Mwanga, E. P., Mchola, I. S., Makala, F. E., Mshani, I. H., Siria, D. J., Mwinyi, S. H., Abbasi, S., Seleman, G., Mgaya, J. N., Gonzalez Jimenez, M., Wynne, K., Sikulu-Lord, M. T., Selvaraj, P., Okumu, F. O., Baldini, F., Babayan, S. (2024) Rapid assessment of the blood-feeding histories of wild-caught malaria mosquitoes using mid-infrared spectroscopy and machine learning. Malaria Journal, 23, (doi: 10.1186/s12936-024-04915-0)

Sinton, M. C., Chandrasegaran, P. R.G., Capewell, P., Cooper, A., Girard, A., Ogunsola, J., Perona-Wright, G., Ngoyi, D. M., Kuispond, N., Bucheton, B., Camara, M., Kajimura, S., Bénézech, C., Mabbott, N. A., MacLeod, A., Quintana, J. F. (2024) Publisher Correction: IL-17 signalling is critical for controlling subcutaneous adipose tissue dynamics and parasite burden during chronic murine Trypanosoma brucei infection. Nature Communications, 15, (doi: 10.1038/s41467-024-46299-4)

Fukuoka, A., Wilson, G. J., Pitmon, E., Koumbas Foley, L., Johnsson, H., Pingen, M., Graham, G. J. (2024) Disruption of placental ACKR3 effects embryo, and offspring, growth and hematopoietic development. Development, 151, (doi: 10.1242/dev.202333)

Fukuoka, A., Wilson, G. J., Pitmon, E., Koumbas Foley, L., Johnsson, H., Pingen, M., Graham, G. J. (2024) Disruption of placental ACKR3 impairs growth and hematopoietic development of offspring. Development, 151, (doi: 10.1242/dev.202333)

Mantilla Valdivieso, E. F., Ross, E. A., Raza, A., Nguyen, L., Hayes, B. J., Jonsson, N. N., James, P., Tabor, A. E. (2024) Expression network analysis of bovine skin infested with Rhipicephalus australis identifies pro-inflammatory genes contributing to tick susceptibility. Scientific Reports, 14, (doi: 10.1038/s41598-024-54577-w)

Jeglinski, J. W.E., Lane, J. V., Votier, S. C., Furness, R. W., Hamer, K. C., McCafferty, D. J., Nager, R. G., Sheddan, M., Wanless, S., Matthiopoulos, J. (2024) HPAIV outbreak triggers short-term colony connectivity in a seabird metapopulation. Scientific Reports, 14, (doi: 10.1038/s41598-024-53550-x)

Jarrett, C., Cyril, K., Haydon, D. T., Wandji, C. A., Ferreira, D. F., Welch, A. J., Powell, L. L., Matthiopoulos, J. (2024) Fewer pests and more ecosystem service‐providing arthropods in shady African cocoa farms: insights from a data integration study. Journal of Applied Ecology, 61, pp. 304-315. (doi: 10.1111/1365-2664.14563)

Antonopoulos, A., Higgins, O., Doyle, S. R., Bartley, D., Morrison, A., Shalaby, M. M., Reboud, J., Devaney, E., Smith, T. J., Laing, R., Busin, V. (2024) Real-time single base specific detection of the Haemonchus contortus S168T variant associated with levamisole resistance using loop-primer endonuclease cleavage loop mediated isothermal amplification. Molecular and Cellular Probes, 73, (doi: 10.1016/j.mcp.2023.101946)

Gonzalo Nadal, V., Kohl, A., Rocchi, M., Brennan, B., Hughes, J., Nichols, J., Da Silva Filipe, A., Dunlop, J.I., Fares, M., Clark, J.J., Tandavanitj, R., Patel, A.H., Cloquell-Miro, A., Bongers, J., Deacon, J., Kaczmarska, A., Stalin, C., Liatis, T., Irving, J., Gutierrez-Quintana, R. (2024) Suspected tick-borne flavivirus meningoencephalomyelitis in dogs from the UK: six cases (2021) Journal of Small Animal Practice, 65, pp. 132-143. (doi: 10.1111/jsap.13682)

Sanda, M. K., Metcalfe, N. B., Mable, B. K. (2024) The potential impact of aquaculture on the genetic diversity and conservation of wild fish in sub-Saharan Africa. Aquatic Conservation: Marine and Freshwater Ecosystems, 34, (doi: 10.1002/aqc.4105)

Dunbar, D., Babayan, S. A., Krumrie, S., Haining, H., Hosie, M. J., Weir, W. (2024) Assessing the feasibility of applying machine learning to diagnosing non-effusive feline infectious peritonitis. Scientific Reports, 14, (doi: 10.1038/s41598-024-52577-4)

Kahamba, N. F., Okumu, F. O., Jumanne, M., Kifungo, K., Odero, J., Baldini, F., Ferguson, H., Nelli, L. (2024) Geospatial modelling of dry season habitats of the malaria vector, Anopheles funestus, in south-eastern Tanzania. Parasites and Vectors, 17, (doi: 10.1186/s13071-024-06119-6)

Rainey, S. M., Lefteri, D. A., Darby, C., Kohl, A., Merits, A., Sinkins, S. P. (2024) Evidence of differences in cellular regulation of Wolbachia-mediated viral inhibition between alphaviruses and flaviviruses. Viruses, 16, (doi: 10.3390/v16010115)

Calvo Alvarez, E., Marc Tsagmo Ngoune, J., Sharma, P., Cooper, A., Camara, A., Travaillé, C., Crouzols, A., MacLeod, A., Rotureau, B. (2023) FLAgellum Member 8 modulates extravascular distribution of African trypanosomes. PLoS Pathogens, 19, (doi: 10.1371/journal.ppat.1011220)

Ferguson, H. M., Govella, N. J. (2023) Impacts of climate change on malaria vector control in Africa. Brill

Nambala, P., Mulindwa, J., Noyes, H., Alibu, V. P., Nerima, B., Namulondo, J., Nyangiri, O., Matovu, E., MacLeod, A., Musaya, J. (2023) Differences in gene expression profiles in early and late stage rhodesiense HAT individuals in Malawi. PLoS Neglected Tropical Diseases, 17, (doi: 10.1371/journal.pntd.0011803)

Donaldson, J. E., Holdo, R. M., Anderson, T. M., Morrison, T. A., Hopcraft, J. G. C., McIntyre, J., Devaney, E., Hempson, G., Senso, B., Trentinus, A., Ezenwa, V. O. (2023) Direct and indirect effects of fire on parasites in an African savanna. Journal of Animal Ecology, 92, pp. 2323-2332. (doi: 10.1111/1365-2656.14013)

Duamor, C. T., Hampson, K., Lankester, F., Lugelo, A., Changalucha, J., Lushasi, K. S., Czupryna, A., Mpolya, E., Kreppel, K., Cleaveland, S., Wyke, S. (2023) Integrating a community-based continuous mass dog vaccination delivery strategy into the veterinary system of Tanzania: a process evaluation using normalization process theory. One Health, 17, (doi: 10.1016/j.onehlt.2023.100575)

Fulton, E. A., Weir, W., Czopowicz, M., McBrearty, A. R. (2023) The relationships between sediment findings and culture results and the presence of proteinuria in canine urine samples. Journal of Small Animal Practice, 64, pp. 749-758. (doi: 10.1111/jsap.13669)

Ribeiro, R., Matthiopoulos, J., Lindgren, F., Tello, C., Zariquiey, C. M., Valderrama, W., Rocke, T. E., Streicker, D. G. (2023) Incorporating environmental heterogeneity and observation effort to predict host distribution and viral spillover from a bat reservoir. Proceedings of the Royal Society B: Biological Sciences, 290, (doi: 10.1098/rspb.2023.1739)

Quintana, J. F., Sinton, M. C., Chandrasegaran, P., Dubey, L. K., Ogunsola, J., Al Samman, M., Haley, M., McConnell, G., Kuispond Swar, N.-R., Ngoyi, D. M., Bending, D., de Lecea, L., Macleod, A., Mabbott, N. A. (2023) The murine meninges acquire lymphoid tissue properties and harbour autoreactive B cells during chronic Trypanosoma brucei infection. PLoS Biology, 21, (doi: 10.1371/journal.pbio.3002389)

Mshani, I. H., Siria, D. J., Mwanga, E. P., Sow, B. B., Sanou, R., Opiyo, M., Sikulu-Lord, M. T., Ferguson, H. M., Diabate, A., Wynne, K., González-Jiménez, M., Baldini, F., Babayan, S. A., Okumu, F. (2023) Key considerations, target product profiles, and research gaps in the application of infrared spectroscopy and artificial intelligence for malaria surveillance and diagnosis. Malaria Journal, 22, (doi: 10.1186/s12936-023-04780-3)

Sare, I., Baldini, F., Viana, M., Badolo, A., Djigma, F., Diabate, A., Bilgo, E. (2023) Adhesion and virulence properties of native Metarhizium fungal strains from Burkina Faso for the control of malaria vectors. Parasites and Vectors, 16, (doi: 10.1186/s13071-023-05831-z)

Sinton, M. C., Chandrasegaran, P. R.G., Capewell, P., Cooper, A., Girard, A., Ogunsola, J., Perona-Wright, G., Ngoyi, D. M., Kuispond, N., Bucheton, B., Camara, M., Kajimura, S., Bénézech, C., Mabbott, N. A., MacLeod, A., Quintana, J. F. (2023) IL-17 signalling is critical for controlling subcutaneous adipose tissue dynamics and parasite burden during chronic murine Trypanosoma brucei infection. Nature Communications, 14, (doi: 10.1038/s41467-023-42918-8)

Linardopoulou, K., Viora, L., Le Kernec, J., Jonsson, N. (2023) Addressing Purpose and Subjective Data Labelling Challenges in Automated Lameness Detection for Cattle with Machine Learning and Micro-Doppler Radar.

Womack, R. J., Capilla-Lasheras, P., McGlade, C. L. O., Dominoni, D. M., Helm, B. (2023) Reproductive fitness is associated with female chronotype in a songbird. Animal Behaviour, 205, pp. 65-78. (doi: 10.1016/j.anbehav.2023.08.018)

Pazmiño Betancourth, M., Ochoa-Gutiérrez, V., Ferguson, H. M., González-Jiménez, M., Wynne, K., Baldini, F., Childs, D. (2023) Evaluation of diffuse reflectance spectroscopy for predicting age, species, and cuticular resistance of Anopheles gambiae s.l under laboratory conditions. Scientific Reports, 13, (doi: 10.1038/s41598-023-45696-x)

Pichler, V., Sanou, A., Love, R. R., Caputo, B., Pombi, M., Toe, K. H., Guelbeogo, M. W., Sagnon, N.’F., Ferguson, H. M., Ranson, H., della Torre, A., Besansky, N. J. (2023) A novel tetra-primer ARMS-PCR approach for the molecular karyotyping of chromosomal inversion 2Ru in the main malaria vectors Anopheles gambiae and Anopheles coluzzii. Parasites and Vectors, 16, (doi: 10.1186/s13071-023-06014-6)

Campillo Poveda, M., Britton, C., Devaney, E., McNeilly, T. N., Gerbe, F., Jay, P., Maizels, R. M. (2023) Tuft cells: detectors, amplifiers, effectors and targets in parasite infection. Cells, 12, (doi: 10.3390/cells12202477)

Dornan, A. J., Halberg, K. V., Beuter, L.-K., Davies, S. A., Dow, J. A.T. (2023) Compromised junctional integrity phenocopies age-dependent renal dysfunction in Drosophila Snakeskin mutants. Journal of Cell Science, 136, (doi: 10.1242/jcs.261118)

Grémillet, D., Ponchon, A., Provost, P., Gamble, A., Abed-Zahar, M., Bernard, A., Courbin, N., Delavaud, G., Deniau, A., Fort, J., Hamer, K. C., Jeavons, R., Lane, J. V., Langley, L., Matthiopoulos, J., Poupart, T., Prudor, A., Stephens, N., Trevail, A., Wanless, S., Votier, S. C., Jeglinski, J. W. E. (2023) Strong breeding colony fidelity in northern gannets following high pathogenicity avian influenza virus (HPAIV) outbreak. Biological Conservation, 286, (doi: 10.1016/j.biocon.2023.110269)

McGlade, C. L.O., Capilla-Lasheras, P., Womack, R. J., Helm, B., Dominoni, D. (2023) Experimental light at night explains differences in activity onset between urban and forest great tits. Biology Letters, 19, (doi: 10.1098/rsbl.2023.0194)

Quintana, J. F., Sinton, M. C., Chandrasegaran, P., Lestari, A. N., Heslop, R., Cheaib, B., Ogunsola, J., Ngoyi, D. M., Swar, N.-R. K., Cooper, A., Mabbott, N. A., Coffelt, S. B., MacLeod, A. (2023) γδ T cells control murine skin inflammation and subcutaneous adipose wasting during chronic Trypanosoma brucei infection. Nature Communications, 14, (doi: 10.1038/s41467-023-40962-y)

Govella, N., Johnson, P. C.D., Killeen, G. F., Ferguson, H. M. (2023) Heritability of biting time behaviours in the major African malaria vector Anopheles arabiensis. Malaria Journal, 22, (doi: 10.1186/s12936-023-04671-7)

Huang, Y., Jonsson, N. N., McLaughlin, M., Burchmore, R., Johnson, P. C.D., Jones, R., McGill, S., Brady, N., Weidt, S., Eckersall, D. (2023) Quantitative TMT-based proteomics revealing host, dietary and microbial proteins in bovine faeces including barley serpin Z4, a prominent component in the head of beer. Journal of Proteomics, 285, (doi: 10.1016/j.jprot.2023.104941)

Odero, J. O., Nambunga, I. H., Wangrawa, D. W., Badolo, A., Weetman, D., Koekemoer, L. L., Ferguson, H. M., Okumu, F. O., Baldini, F. (2023) Advances in the genetic characterization of the malaria vector, Anopheles funestus, and implications for improved surveillance and control. Malaria Journal, 22, (doi: 10.1186/s12936-023-04662-8)

Jones, S., Tyson, G. B., Orton, R. J., Smollett, K., Manna, F., Kwok, K., Suarez, N. M., Logan, N., McDonald, M., Bowie, A., Da Silva Filipe, A., Willett, B. J., Weir, W., Hosie, M. J. (2023) SARS-CoV-2 in domestic UK cats from Alpha to Omicron: Swab surveillance and case reports. Viruses, 15, (doi: 10.3390/v15081769)

Tyson, G. B., Jones, S., Montreuil-Spencer, C., Logan, N., Scott, S., Sasvari, H., McDonald, M., Marshall, L., Murcia, P. R., Willett, B. J., Weir, W., Hosie, M. (2023) Increase in SARS-CoV-2 seroprevalence in UK domestic felids despite weak immunogenicity of post-Omicron variants. Viruses, 15, (doi: 10.3390/v15081661)

Rainey, S. M., Geoghegan, V., Lefteri, D. A., Ant, T. H., Martinez, J., McNamara, C. J., Kamel, W., de Laurent, Z. R., Castello, A., Sinkins, S. P. (2023) Differences in proteome perturbations caused by the Wolbachia strain wAu suggest multiple mechanisms of Wolbachia-mediated antiviral activity. Scientific Reports, 13, (doi: 10.1038/s41598-023-38127-4)

Johnson, E., Kumar Sharma, R. S., Cuenca, P. R., Byrne, I., Salgado-Lynn, M., Lin, L. C., Zulkifli, N., Mohd Saidi, N. D., Drakeley, C., Matthiopoulos, J., Nelli, L., Fornace, K. (2023) Landscape drives zoonotic malaria prevalence in non-human primates. eLife, (doi: 10.7554/eLife.88616)

Mewamba, E. M., Noyes, H., Tiofack, A. A. Z., Kamga, R. M. N., Kamdem, C. N., Mengoue, L. E. T., Ofon, E., Ngassam, R. I. K., Nyangiri, O., Bucheton, B., Njiokou, F., Womeni, M. H., Matovu, E., MacLeod, A., Simo, G. (2023) Association between polymorphisms of IL4, IL13, IL10, STAT6 and IFNG genes, cytokines and immunoglobulin E levels with high burden of Schistosoma mansoni in children from schistosomiasis endemic areas of Cameroon. Infection, Genetics and Evolution, 111, (doi: 10.1016/j.meegid.2023.105416)

Britton, C., Laing, R., McNeilly, T. N., Perez, M. G., Otto, T. D., Hildersley, K. A., Maizels, R. M., Devaney, E., Gillan, V. (2023) New technologies to study helminth development and host-parasite interactions. International Journal for Parasitology, 53, pp. 393-403. (doi: 10.1016/j.ijpara.2022.11.012)

Leggewie, M., Scherer, C., Altinli, M., Gestuveo, R. J., Sreenu, V. B., Fuss, J., Vazeille, M., Mousson, L., Badusche, M., Kohl, A., Failloux, A.-B., Schnettler, E. (2023) The Aedes aegypti RNA interference response against Zika virus in the context of co-infection with dengue and chikungunya viruses. PLoS Neglected Tropical Diseases, 17, (doi: 10.1371/journal.pntd.0011456)

Gamble, A., Suessmilch, M., Bonestroo, A., Merits, A., Graham, G. J., Cavanagh, J., Edgar, J. M., Pingen, M. (2023) Establishing mixed neuronal and glial cell cultures from embryonic mouse brains to study infection and innate immunity. Journal of Visualized Experiments, (doi: 10.3791/65331)

Sulaimon, T. A., Chaters, G. L., Nyasebwa, O. M., Swai, E. S., Cleaveland, S., Enright, J., Kao, R. R., Johnson, P. C.D. (2023) Modeling the effectiveness of targeting Rift Valley fever virus vaccination using imperfect network information. Frontiers in Veterinary Science, 10, (doi: 10.3389/fvets.2023.1049633)

Lushasi, K. et al. (2023) Integrating contact tracing and whole-genome sequencing to track the elimination of dog-mediated rabies: an observational and genomic study. eLife, 12, (doi: 10.7554/elife.85262)

Ribeiro da Silva, S. J., Kohl, A., Pena, L., Pardee, K. (2023) Clinical and laboratory diagnosis of monkeypox (mpox): current status and future directions. iScience, 26, (doi: 10.1016/j.isci.2023.106759)

Durrani, Z., Kinnaird, J., Cheng, C. W., Brühlmann, F., Capewell, P., Jackson, A., Larcombe, S., Olias, P., Weir, W., Shiels, B. (2023) A parasite DNA binding protein with potential to influence disease susceptibility acts as an analogue of mammalian HMGA transcription factors. PLoS ONE, 18, (doi: 10.1371/journal.pone.0286526)

Le Veve, A., Burghgraeve, N., Genete, M., Lepers-Blassiau, C., Takou, M., De Meaux, J., Mable, B. K., Durand, E., Vekemans, X., Castric, V. (2023) Long-term balancing selection and the genetic load linked to the self-incompatibility locus in Arabidopsis halleri and A. lyrata. Molecular Biology and Evolution, 40, (doi: 10.1093/molbev/msad120)

Tyson, G. B., Jones, S., Logan, N., McDonald, M., Marshall, L., Murcia, P. R., Willett, B. J., Weir, W., Hosie, M. J. (2023) SARS-CoV-2 seroprevalence and cross-variant antibody neutralization in cats, United Kingdom. Emerging Infectious Diseases, 29, pp. 1223-1227. (doi: 10.3201/eid2906.221755)

Wu, S. L., Henry, J. M., Citron, D. T., Mbabazi Ssebuliba, D., Nakakawa Nsumba, J., Sánchez C., H. M., Brady, O. J., Guerra, C. A., García, G. A., Carter, A. R., Ferguson, H. M., Afolabi, B. E., Hay, S. I., Reiner, R. C., Kiware, S., Smith, D. L. (2023) Spatial dynamics of malaria transmission. PLoS Computational Biology, 19, (doi: 10.1371/journal.pcbi.1010684)

Akhmetova, A., Guerrero, J., McAdam, P., Salvador, L. C.M., Crispell, J., Lavery, J., Presho, E., Kao, R. R., Biek, R., Menzies, F., Trimble, N., Harwood, R., Pepler, P. T., Oravcova, K., Graham, J., Skuce, R., du Plessis, L., Thompson, S., Wright, L., Byrne, A. W., Allen, A. R. (2023) Genomic epidemiology of Mycobacterium bovis infection in sympatric badger and cattle populations in Northern Ireland. Microbial Genomics, 9, (doi: 10.1099/mgen.0.001023)

Joyce, H., Oliver, J. A. C., Fricker, G., Weir, W., Fleming, L. (2023) Keratouveitis in juvenile dogs and its presumed association with canine adenovirus infection. Veterinary Ophthalmology, 26, pp. 262-267. (doi: 10.1111/vop.13085)

Jeglinski, J. W.E., Wanless, S., Murray, S., Barrett, R. T., Gardarsson, A., Harris, M. P., Dierschke, J., Strøm, H., Lorentsen, S.-H., Matthiopoulos, J. (2023) Metapopulation regulation acts at multiple spatial scales: insights from a century of seabird colony census data. Ecological Monographs, 93, (doi: 10.1002/ecm.1569)

Panarese, R., Moore, R., Page, A. P., McDonald, M., MacDonald, E., Weir, W. (2023) The long-distance relationship between Dirofilaria and the UK: case report and literature review. Frontiers in Veterinary Science, 10, (doi: 10.3389/fvets.2023.1128188)

Donald, C. (2023) Making Science Memorable.

Laureti, M., Lee, R.-L., Bennett, A., Wilson, L. A., Sy, V. E., Kohl, A., Dietrich, I. (2023) Rift Valley Fever Virus primes immune responses in Aedes aegypti cells. Pathogens, 12, (doi: 10.3390/pathogens12040563)

Mancini, M. V., Tandavanitj, R., Ant, T. H., Murdochy, S. M., Gingell, D. D., Setthapramote, C., Natsrita, P., Kohl, A., Sinkins, S. P., Patel, A. H., De Lorenzo, G. (2023) Evaluation of an engineered Zika virus-like particle vaccine candidate in a mosquito-mouse transmission model. mSphere, 8, (doi: 10.1128/msphere.00564-22)

Pondeville, E., Failloux, A.-B., Simard, F., Volf, P., Cristanti, A., Haghighat-Khah, R. E., Busquets, N., Abad, F. X., Wilson, A. J., Bellini, R., Marsh Arnaud, S., Kohl, A., Veronesi, E. (2023) Infravec2 guidelines for the design and operation of containment level 2 and 3 insectaries in Europe. Pathogens and Global Health, 117, pp. 293-307. (doi: 10.1080/20477724.2022.2108639)

Ant, T. H., Mancini, M. V., McNamara, C. J., Rainey, S. M., Sinkins, S. P. (2023) Wolbachia-virus interactions and arbovirus control through population replacement in mosquitoes. Pathogens and Global Health, 117, pp. 245-258. (doi: 10.1080/20477724.2022.2117939)

Pagnossin, D., Weir, W., Smith, A., Fuentes, M., Coelho, J., Oravcova, K. (2023) Streptococcus canis genomic epidemiology reveals the potential for zoonotic transfer. Microbial Genomics, 9, (doi: 10.1099/mgen.0.000974)

Donald, C., Veitch, N., Judge, A., Carman, C., Scott, P., Taylor, S., Marks, L., Edmond, A., Latkovskis, I., Kirkwood, N., McDonnell, N., Macpherson, F. (2023) The Impact of using Virtual Reality Lessons to Teach Microbiology Online.

McIntyre, K., Stapleton, G., Sherry, L., Donald, C., Milling, S., Nibbs, R., Douce, G., Latkovskis, I., McDonnell, N. (2023) ‘I felt as if I was there’ - Can Virtual Reality (VR) Enhance Students’ Learning Experience of Immunology Teaching?

Sabando, A. R., Lafuente, E. U., Galbete, A., Ciosi, M., Amigot, F. G., Solaesa, V. G., Martínez, V. Á., Martinez-Descals, A., Mila, M., Trujillo-Tiebas, M. J., López-Sendón, J. L., Fenollar-Cortés, M., Legarda, I., Noguera, S. B., Millán, J. M., Durán-Herrera, C., Monckton, D. G., Ramos-Arroyo, M. A. (2023) Spanish HTT gene study reveals haplotype and allelic diversity with possible implications for germline expansion dynamics in Huntington disease. Human Molecular Genetics, 32, pp. 897-906. (doi: 10.1093/hmg/ddac224)

Viana, M., Benavides, J. A., Broos, A., Ibañez z Loayza, D., Niño, R., Bone, J., Da Silva Filipe, A., Orton, R., Valderrama Bazan, W., Matthiopoulos, J., Streicker, D. G. (2023) Effects of culling vampire bats on the spatial spread and spillover of rabies virus. Science Advances, 9, (doi: 10.1126/sciadv.add7437)

Alexander, A. J.T., Salvemini, M., Sreenu, V. B., Hughes, J., Telleria, E. L., Ratinier, M., Arnaud, F., Volf, P., Brennan, B., Varjak, M., Kohl, A. (2023) Characterisation of the antiviral RNA interference response to Toscana virus in sand fly cells. PLoS Pathogens, 19, (doi: 10.1371/journal.ppat.1011283)

Ribeiro, R., Eze, J. I., Gilbert, L., Macrae, A., Duncan, A., Baughan, J., Gunn, G., Auty, H. (2023) Linking human tick bite risk with tick abundance in the environment: a novel approach to quantify tick bite risk using orienteers in Scotland. Ticks and Tick-borne Diseases, 14, (doi: 10.1016/j.ttbdis.2022.102109)

Perez, M., Gillan, V., Devaney, E., Britton, C. (2023) Parasitic Nematode miRNAs and EVs - Transfection into Organoid Epithelial Cells [Poster]

Morales, F., Corrales, E., Vásquez, M., Zhang, B., Fernández, H., Alvarado, F., Cortés, S., Santamaría-Ulloa, C., Cooper, A., McIlwaine, E., Cumming, S. A., Adam, B., Krahe, R., Puymirat, J., Schoser, B., Timchenko, L., Ashizawa, T., Thornton, C., Monckton, D. G., Krahe, R., Monckton, D. G. (2023) Individual-specific levels of CTG•CAG somatic instability are shared across multiple tissues in myotonic dystrophy type 1. Human Molecular Genetics, 32, pp. 621-631. (doi: 10.1093/hmg/ddac231)

Villa, S., Carugati, M., Rubach, M. P., Cleaveland, S., Mpagama, S. G., Khan, S. S., Mfinanga, S., Mmbaga, B. T., Crump, J. A., Raviglione, M. C. (2023) ‘One Health´ approach to end zoonotic TB. International Journal of Tuberculosis and Lung Disease, 27, pp. 101-105. (doi: 10.5588/ijtld.22.0393)

Capuzzello, G., Viora, L., Borelli, E., Jonsson, N. N. (2023) Evaluation of an indwelling bolus equipped with a triaxial accelerometer for the characterisation of the diurnal pattern of bovine reticuloruminal contractions. Journal of Dairy Research, 90, pp. 9-15. (doi: 10.1017/S0022029923000134)

Raza, A., Schulz, B. L., Nouwens, A., Naseem, M. N., Kamran, M., Mantilla Valdivieso, E. F., Kerr, E. D., Constantinoiu, C., Jonsson, N. N., James, P., Tabor, A. E. (2023) Application of quantitative proteomics to discover biomarkers for tick resistance in cattle. Frontiers in Immunology, 14, (doi: 10.3389/fimmu.2023.1091066)

Mwanga, E. P., Siria, D. J., Mitton, J., Mshani, I. H., González-Jiménez, M., Selvarajah, P., Wynne, K., Baldini, F., Okumu, F. O., Babayan, S. A. (2023) Using transfer learning and dimensionality reduction techniques to improve generalisability of machine-learning predictions of mosquito ages from mid-infrared spectra. BMC Bioinformatics, 24, (doi: 10.1186/s12859-022-05128-5)

Hacılarlıoglu, S., Bilgic, H. B., Bakırcı, S., Tait, A., Weir, W., Shiels, B., Karagenc, T. (2023) Selection of genotypes harbouring mutations in the cytochrome b gene of Theileria annulata is associated with resistance to buparvaquone. PLoS ONE, 18, (doi: 10.1371/journal.pone.0279925)

Manali, M., Bissett, L. A., Amat, J. A.R., Logan, N., Scott, S., Hughes, E. C., Harvey, W. T., Orton, R., Thomson, E. C., Gunson, R. N., Viana, M., Willett, B., Murcia, P. R. (2023) SARS-CoV-2 evolution and patient immunological history shape the breadth and potency of antibody-mediated immunity. Journal of Infectious Diseases, 227, pp. 40-49. (doi: 10.1093/infdis/jiac332)

Ayers, V. B., Huang, Y.-J. S., Kohl, A., Dunlop, J. I., Hettenbach, S. M., Park, S. L., Higgs, S., Vanlandingham, D. L. (2023) Comparison of immunogenicity between a candidate live attenuated vaccine and an inactivated vaccine for Cache Valley virus. Viral Immunology, 36, pp. 41-47. (doi: 10.1089/vim.2022.0103)

Benoit, J. B., McCluney, K. E., DeGennaro, M. J., Dow, J. A.T. (2023) Dehydration dynamics in terrestrial arthropods: from water sensing to trophic interactions. Annual Review of Entomology, 68, pp. 129-149. (doi: 10.1146/annurev-ento-120120-091609)

Baldini, F., Viana, M. (2023) Dried out but alive: how mosquitoes survive 8 months. Trends in Parasitology, 39, pp. 1-3. (doi: 10.1016/j.pt.2022.11.006)

Ayers, V. B., Huang, Y.-J. S., Dunlop, J. I., Kohl, A., Brennan, B., Higgs, S., Vanlandingham, D. L. (2023) Immunogenicity of a candidate live attenuated vaccine for Rift Valley fever virus with a two-segmented genome. Viral Immunology, 36, pp. 33-40. (doi: 10.1089/vim.2022.0104)

Ribeiro da Silva, S. J., Kohl, A., Pena, L., Pardee, K. (2023) Recent insights into SARS‐CoV‐2 omicron variant. Reviews in Medical Virology, 33, (doi: 10.1002/rmv.2373)

White, R. et al. (2023) Special considerations for studies of extracellular vesicles from parasitic helminths: a community‐led roadmap to increase rigour and reproducibility. Journal of Extracellular Vesicles, 12, (doi: 10.1002/jev2.12298)

Valdivieso, E. M., Nguyen, L., Ross, E., Raza, A., James, P., Hayes, B., Jonsson, N., Tabor, A. (2023) 557. Identification of differentially expressed transcription factors in Brangus skin infested with Rhipicephalus australis. (doi: 10.3920/978-90-8686-940-4_557)

Bartley, P. M., Thomson, S., Jonsson, N. N., Taroda, A., Elisabeth, A. I., Katzer, F. (2023) Differences in virulence and oocyst shedding profiles in lambs experimentally infected with different isolates of Cryptosporidium parvum. Current Research in Parasitology and Vector-Borne Diseases, 4, (doi: 10.1016/j.crpvbd.2023.100127)

Nati, J. J.H., Halsey, L. G., Johnson, P. C.D., Lindström, J., Killen, S. S. (2023) Does aerobic scope influence geographical distribution of teleost fishes? Conservation Physiology, 11, (doi: 10.1093/conphys/coad012)

Mellya, R. V. K., Hopcraft, J. G. C., Eblate, E. M., Kariuki, L., Otiende, M., Chuma, I. S., Macha, E. S., Wambura, D., Kilbride, E., Mable, B. K. (2023) Mitochondrial DNA diversity of the eastern black rhinoceros (Diceros bicornis michaeli) in Tanzania: implications for future conservation. Conservation Genetics, 24, pp. 905-919. (doi: 10.1007/s10592-023-01545-y)

Finney, G. E., Hargrave, K. E., Pingen, M., Purnell, T., Todd, D., MacDonald, F., Worrell, J. C., Macleod, M. K.L. (2023) Triphasic production of IFNγ by innate and adaptive lymphocytes following influenza A virus infection. Discovery Immunology, 2, (doi: 10.1093/discim/kyad014)

Ouédraogo, W. M., Toé, K. H., Sombié, A., Viana, M., Bougouma, C., Sanon, A., Weetman, D., McCall, P. J., Kanuka, H., Badolo, A. (2022) Impact of physicochemical parameters of Aedes aegypti breeding habitats on mosquito productivity and the size of emerged adult mosquitoes in Ouagadougou City, Burkina Faso. Parasites and Vectors, 15, (doi: 10.1186/s13071-022-05558-3)

Johnson, P. C. D., Hägglund, S., Näslund, K., Meyer, G., Taylor, G., Orton, R. J., Zohari, S., Haydon, D. T., Valarcher, J. F. (2022) Evaluating the potential of whole-genome sequencing for tracing transmission routes in experimental infections and natural outbreaks of bovine respiratory syncytial virus. Veterinary Research, 53, (doi: 10.1186/s13567-022-01127-9)

Krumrie, S., Capewell, P., McDonald, M., Dunbar, D., Panarese, R., Katzer, F., El Sakka, N., Mellor, D., Alexander, C. L., Weir, W. (2022) Molecular characterisation of Giardia duodenalis from human and companion animal sources in the United Kingdom using an improved triosephosphate isomerase molecular marker. Current Research in Parasitology and Vector-Borne Diseases, 2, (doi: 10.1016/j.crpvbd.2022.100105)

Antonopoulos, A., Doyle, S. R., Bartley, D. J., Morrison, A. A., Kaplan, R., Howell, S., Neveu, C., Busin, V., Devaney, E., Laing, R. (2022) Allele specific PCR for a major marker of levamisole resistance in Haemonchus contortus. International Journal for Parasitology: Drugs and Drug Resistance, 20, pp. 17-26. (doi: 10.1016/j.ijpddr.2022.08.001)

Borelli, E., Jonsson, N. N., Denholm, K. S. (2022) Associations between putative risk factors and poor colostrum yield in Holstein Friesian cattle. Research in Veterinary Science, 149, pp. 74-81. (doi: 10.1016/j.rvsc.2022.06.008)

Johnston, P. E.J., Gray, A., Weir, W., Wigham, E., Mercer, A., McGuigan, M., Anderson, J. (2022) Livestreaming can augment the observation of veterinary post-mortem examinations. Springer

Taylor, A. S., Barros, D., Gobet, N., Schuepbach, T., McAllister, B., Aeschbach, L., Randall, E. L., Trofimenko, E., Heuchan, E. R., Barszcz, P., Ciosi, M., Morgan, J., Hafford-Tear, N. J., Davidson, A. E., Massey, T. H., Monckton, D. G., Jones, L., network, R. I. o. t. E. H.’s. d., Xenarios, I., Dion, V. (2022) Repeat Detector: versatile sizing of expanded tandem repeats and identification of interrupted alleles from targeted DNA sequencing. NAR Genomics and Bioinformatics, 4, (doi: 10.1093/nargab/lqac089)

Atim, S. A., Ashraf, S., Belij-Rammerstorfer, S., Ademun, A. R., Vudriko, P., Nakayiki, T., Niebel, M., Shepherd, J., Balinandi, S., Nakanjako, G., Abaasa, A., Johnson, P. C.D., Odongo, S., Esau, M., Bahati, M., Kaleebu, P., Lutwama, J. J., Masembe, C., Lambe, T., Thomson, E. C., Tweyongyere, R. (2022) Risk factors for Crimean-Congo Haemorrhagic Fever (CCHF) virus exposure in farming communities in Uganda. Journal of Infection, 85, pp. 693-701. (doi: 10.1016/j.jinf.2022.09.007)

Mollentze, N., Keen, D., Munkhbayar, U., Biek, R., Streicker, D. G. (2022) Variation in the ACE2 receptor has limited utility for SARS-CoV-2 host prediction. eLife, 11, (doi: 10.7554/eLife.80329)

Githu, V., Baravuga, M. E., Mbarawa, A., Msuya, H. M., Mlacha, Y. P., Chaki, P. P., Kiware, S., Mirzai, N., Ferguson, H., Govella, N. J. (2022) Comparative evaluation of different versions of exposure-free Mosquito electrocuting traps and Barrier screen trap for monitoring outdoor densities and biting time phenotypes by malaria and filariasis vectors in Tanzania. Parasites and Vectors, 15, (doi: 10.1186/s13071-022-05549-4)

De Glanville, W. A., Allan, K., Nyarobi, J. M., Thomas, K. M., Lankester, F., Kibona, T. J., Claxton, J. R., Brennan, B., Carter, R., Crump, J. A., Halliday, J. E.B., Ladbury, G., MMBAGA, B. T., Mramba, F., Nyasebwa, O. M., Rubach, M. P., Rostal, M. K., Sanka, P., Swai, E. S., Szemiel, A. M., Willett, B. J., Cleaveland, S. (2022) An outbreak of Rift Valley fever among peri-urban dairy cattle in northern Tanzania. Transactions of the Royal Society of Tropical Medicine and Hygiene, 116, pp. 1082-1090. (doi: 10.1093/trstmh/trac076)

Matthiopoulos, J. (2022) Defining, estimating, and understanding the fundamental niches of complex animals in heterogeneous environments. Ecological Monographs, 92, (doi: 10.1002/ecm.1545)

Jacquot, M., Wallace, M. A., Streicker, D. G., Biek, R. (2022) Geographic range overlap rather than phylogenetic distance explains rabies virus transmission among closely related bat species. Viruses, 14, (doi: 10.3390/v14112399)

Ayers, V. B., Huang, Y.-J. S., Dunlop, J. I., Kohl, A., Brennan, B., Higgs, S., Vanlandingham, D. L. (2022) Replication kinetics of a candidate live-attenuated vaccine for Cache Valley virus in Aedes albopictus. Vector-Borne and Zoonotic Diseases, 22, pp. 553-558. (doi: 10.1089/vbz.2022.0053)

Aldossari, S., Husmeier, D., Matthiopoulos, J. (2022) Transferable species distribution modelling: comparative performance of Generalised Functional Response models. Ecological Informatics, 71, (doi: 10.1016/j.ecoinf.2022.101803)

Coultous, R., Gotić, J., McCann, M., Sutton, D., Beck, R., Shiels, B. (2022) Novel equi merozoite antigen (ema-1) gene heterogeneity in a geographically isolated Theileria equi population in Croatia. Parasites and Vectors, 15, (doi: 10.1186/s13071-022-05484-4)

Tamarozzi, F., Kibona, T., de Glanville, W. A., Mappi, T., Adonikamu, E., Salewi, A., Misso, K., Maro, V., Casulli, A., Santoro, A., Santolamazza, F., Mmbaga, B. T., Cleaveland, S. (2022) Cystic echinococcosis in northern Tanzania: a pilot study in Maasai livestock-keeping communities. Parasites and Vectors, 15, (doi: 10.1186/s13071-022-05518-x)

Doyle, S. R., Laing, R., Bartley, D., Morrison, A., Holroyd, N., Maitland, K., Antonopoulos, A., Chaudhry, U., Flis, I., Howell, S., McIntyre, J., Gilleard, J. S., Tait, A., Mable, B., Kaplan, R., Sargison, N., Britton, C., Berriman, M., Devaney, E., Cotton, J. A. (2022) Genomic landscape of drug response reveals mediators of anthelmintic resistance. Cell Reports, 41, (doi: 10.1016/j.celrep.2022.111522)

Jagannath, D. K., Valiyaparambil, A., Viswanath, V. K., Hurakadli, M. A., Kamariah, N., Jafer, A. C., Patole, C., Pradhan, S., Kumar, N., Lakshminarasimhan, A. (2022) Refolding and characterization of a diabody against Pfs25, a vaccine candidate of Plasmodium falciparum. Analytical Biochemistry, 655, (doi: 10.1016/j.ab.2022.114830)

Dawson, J., Baine-Savanhu, F. K., Ciosi, M., Maxwell, A., Monckton, D. G., Krause, A. (2022) A probable cis-acting genetic modifier of Huntington disease frequent in individuals with African ancestry. Human Genetics and Genomics Advances, 3, (doi: 10.1016/j.xhgg.2022.100130)

Duamor, C. T., Lankester, F. F., Mpolya, E. A., Ferguson, E. A., Johnson, P. C., Wyke, S., Cleaveland, S., Hampson, K., Kreppel, K. A. (2022) Participation in mass dog vaccination campaigns in Tanzania: Benefits of community and public engagement. Frontiers in Public Health, 10, (doi: 10.3389/fpubh.2022.971967)

Jarrett, C., Haydon, D. T., Morales, J. M., Ferreira, D. F., Forzi, F. A., Welch, A. J., Powell, L. L., Matthiopoulos, J. (2022) Integration of mark–recapture and acoustic detections for unbiased population estimation in animal communities. Ecology, 103, (doi: 10.1002/ecy.3769)

de Glanville, W. A., Nyarobi, J. M., Kibona, T., Halliday, J. E.B., Thomas, K. M., Allan, K. J., Johnson, P. C.D., Davis, A., Lankester, F., Claxton, J. R., Rostal, M. K., Carter, R. W., de Jong, R. M.F., Rubach, M. P., Crump, J. A., Mmbaga, B. T., Nyasebwa, O. M., Swai, E. S., Willett, B., Cleaveland, S. (2022) Inter-epidemic Rift Valley fever virus infection incidence and risks for zoonotic spillover in northern Tanzania. PLoS Neglected Tropical Diseases, 16, (doi: 10.1371/journal.pntd.0010871)

Chechet, G. D., Kwaga, J. K.P., Yahaya, J., Noyes, H., MacLeod, A., Adamson, W. E. (2022) SARS-CoV-2 seroprevalence at urban and rural sites in Kaduna State, Nigeria, during October/November 2021, immediately prior to detection of the Omicron variant. International Journal of Epidemiology, 51, pp. 1361-1370. (doi: 10.1093/ije/dyac141)

Pagnossin, D., Smith, A., Oravcova, K., Weir, W. (2022) Streptococcus canis, the underdog of the genus. Veterinary Microbiology, 273, (doi: 10.1016/j.vetmic.2022.109524)

Quintana, J. F., Chandrasegaran, P., Sinton, M. C., Briggs, E. M., Otto, T. D., Heslop, R., Bentley-Abbot, C., Loney, C., de Lecea, L., Mabbott, N. A., MacLeod, A. (2022) Single cell and spatial transcriptomic analyses reveal microglia-plasma cell crosstalk in the brain during Trypanosoma brucei infection. Nature Communications, 13, (doi: 10.1038/s41467-022-33542-z)

Akorli, E. A., Ubiaru, P. C., Pradhan, S., Akorli, J., Ranford-Cartwright, L. (2022) Bio-products from Serratia marcescens isolated from Ghanaian Anopheles gambiae reduce Plasmodium falciparum burden in vector mosquitoes. Frontiers in Tropical Diseases, 3, (doi: 10.3389/fitd.2022.979615)

Meza, D. K., Mollentze, N., Broos, A., Tello, C., Valderrama, W., Recuenco, S., Carrera, J. E., Shiva, C., Falcon, N., Viana, M., Streicker, D. G. (2022) Ecological determinants of rabies virus dynamics in vampire bats and spillover to livestock. Proceedings of the Royal Society of London Series B: Biological Sciences, 289, (doi: 10.1098/rspb.2022.0860)

Ciosi, M., Young, R., Kwak, S., Monckton, D. G. (2022) Longitudinal Analysis of Somatic Expansion of the HTT Repeat in Blood as a Potential Biomarker of Somatic Instability in Huntingon Disease. (doi: 10.1136/jnnp-2022-ehdn.57)

Ruiz de Sabando, A., Ciosi, M., Galbete, A., Monckton, D. G., Ramos-Arroyo, M. A. (2022) Somatic Mosaicism of the HTT Cag Repeat in Intermediate Allele Carriers with Neurocognitive Symptoms Compatible with Huntington Disease. (doi: 10.1136/jnnp-2022-ehdn.1)

da Silva, S. J. R., Frutuoso do Nascimento, J. C., Mendes, R. P. G., Guarines, K. M., da Silva, C. T. A., da Silva, P. G., de Magalhães, J. J. F., Vigaar, J. R.J., Silva-Júnior, A., Kohl, A., Pardee, K., Pena, L. (2022) Two years into the COVID-19 pandemic: lessons learned. ACS Infectious Diseases, 8, pp. 1758-1814. (doi: 10.1021/acsinfecdis.2c00204)

Capuzzello, G., Jacinto, J. G. P., Häfliger, I. M., Chapman, G. E., Soto Martin, S., Viora, L., Jonsson, N. N., Drögemüller, C. (2022) A large deletion encompassing exon 2 of the ectodysplasin A (EDA) gene in a British blue crossbred calf with hypohidrotic ectodermal dysplasia. Acta Veterinaria Scandinavica, 64, (doi: 10.1186/s13028-022-00641-2)

Duamor, C. T., Hampson, K., Lankester, F., Lugelo, A., Mpolya, E., Kreppel, K., Cleaveland, S., Wyke, S. (2022) Development, feasibility and potential effectiveness of community-based continuous mass dog vaccination delivery strategies: Lessons for optimization and replication. PLoS Neglected Tropical Diseases, 16, (doi: 10.1371/journal.pntd.0010318)

Capuzzello, G., Viora, L., Borelli, E., Jonsson, N. (2022) Characterisation of reticuloruminal contractions using a reticuloruminal accelerometer bolus, neck collar accelerometer and clinical examination (ultrasound and auscultation)

Strauß, A. F.T., McCafferty, D. J., Nord, A., Lehmann, M., Helm, B. (2022) Using skin temperature and activity profiles to assign chronotype in birds. Animal Biotelemetry, 10, (doi: 10.1186/s40317-022-00296-w)

Toé, H. K., Zongo, S., Guelbeogo, M. W., Kamgang, B., Viana, M., Tapsoba, M., Sanou, A., Traoré, A., McCall, P. J., Sagnon, N.'F. (2022) Multiple insecticide resistance and first evidence of V410L kdr mutation in Aedes (Stegomyia) aegypti (Linnaeus) from Burkina Faso. Medical and Veterinary Entomology, 36, pp. 309-319. (doi: 10.1111/mve.12602)

Gandy, S., Kilbride, E., Biek, R., Millins, C., Gilbert, L. (2022) No net effect of host density on tick-borne disease hazard due to opposing roles of vector amplification and pathogen dilution. Ecology and Evolution, 12, (doi: 10.1002/ece3.9253)

Kibona, T., Buza, J., Shirima, G., Lankester, F., Nzalawahe, J., Lukambagire, A.-H., Kreppel, K., Hughes, E., Allan, K. J., Cleaveland, S. (2022) Taenia multiceps in northern Tanzania: an important but preventable disease problem in pastoral and agropastoral farming systems. Parasitologia, 2, pp. 237-248. (doi: 10.3390/parasitologia2030020)

McManus, R., Boden, L., Weir, W., Viora, L., Barker, R., Kim, Y., McBride, P., Yang, S. (2022) Thermography for Disease Detection in Livestock.

Ngowo, H., Limwagu, A. J., Ferguson, H. M., Matthiopoulos, J., Okumu, F. O., Nelli, L. (2022) A statistical calibration tool for methods used to sample outdoor-biting mosquitoes. Parasites and Vectors, 15, (doi: 10.1186/s13071-022-05403-7)

Attractive Targeted Sugar Bait Phase III Trial Group, et al. (2022) Attractive targeted sugar bait phase III trials in Kenya, Mali, and Zambia. Trials, 23, (doi: 10.1186/s13063-022-06555-8)

McManus, R., Boden, L., Weir, W., Viora, L., Barker, R., Kim, Y., McBride, P., Yang, S. (2022) Thermography for disease detection in livestock: a scoping review. Frontiers in Veterinary Science, 9, (doi: 10.3389/fvets.2022.965622)

Nambala, P., Mulindwa, J., Chammudzi, P., Senga, E., Lemelani, M., Zgambo, D., Matovu, E., MacLeod, A., Musaya, J. (2022) Persistently high incidences of Trypanosoma brucei rhodesiense sleeping sickness with contrasting focus-dependent clinical phenotypes in Malawi. Frontiers in Tropical Diseases, 3, (doi: 10.3389/fitd.2022.824484)

Bamford, C. G.C., Aranday-Cortes, E., Sanchez-Velazquez, R., Mullan, C., Kohl, A., Patel, A. H., Wilson, S. J., McLauchlan, J. (2022) A human and rhesus macaque interferon-stimulated gene screen shows that over-expression of ARHGEF3/XPLN inhibits replication of hepatitis C virus and other flavivirids. Viruses, 14, (doi: 10.3390/v14081655)

Huang, Y., Jones, R., Compiani, R., Grossi, S., Johnson, P.C.D., Eckersall, P.D., Sgoifo Rossi, C.A., Jonsson, N.N. (2022) Effects of ammonia-treated maize on growth performance of beef cattle. Animal Feed Science and Technology, 290, (doi: 10.1016/j.anifeedsci.2022.115350)

Perez, M. G., Gillan, V., Maitland, K., Devaney, E., Britton, C. (2022) microRNAs in Gastrointestinal Nematode-host Interactions [Poster]

Tajeri, S., Momeux, L., Saintpierre, B., Mfarrej, S., Chapple, A., Mourier, T., Shiels, B., Ariey, F., Pain, A., Langsley, G. (2022) Theileria annulata histone deacetylase 1 (TaHDAC1) initiates schizont to merozoite stage conversion. Scientific Reports, 12, (doi: 10.1038/s41598-022-15518-7)

Thomas, K. M. et al. (2022) Prospective cohort study reveals unexpected aetiologies of livestock abortion in Northern Tanzania. Scientific Reports, 12, (doi: 10.1038/s41598-022-15517-8)

Liu, W., McNeilly, T. M., Mitchell, M., Burgess, S. T.G., Nisbet, A. J., Matthews, J. B., Babayan, S. A. (2022) Vaccine-induced time- and age-dependent mucosal immunity to gastrointestinal parasite infection. npj Vaccines, 7, (doi: 10.1038/s41541-022-00501-0)

Nadal, D., Abela-Ridder, B., Beeching, S., Cleaveland, S., Cronin, K., Steenson, R., Hampson, K. (2022) The impact of the first year of the COVID-19 pandemic on canine rabies control efforts: a mixed-methods study of observations about the present and lessons for the future. Frontiers in Tropical Diseases, 3, (doi: 10.3389/fitd.2022.866811)

Dow, J. A.T., Simons, M., Romero, M. F. (2022) Drosophila melanogaster: a simple genetic model of kidney structure, function and disease. Nature Reviews Nephrology, 18, pp. 417-434. (doi: 10.1038/s41581-022-00561-4)

Badolo, A., Sombié, A., Yaméogo, F., Wangrawa, D. W., Sanon, A., Pignatelli, P. M., Sanon, A., Viana, M., Kanuka, H., Weetman, D., McCall, P. J. (2022) First comprehensive analysis of Aedes aegypti bionomics during an arbovirus outbreak in west Africa: dengue in Ouagadougou, Burkina Faso, 2016-2017. PLoS Neglected Tropical Diseases, 16, (doi: 10.1371/journal.pntd.0010059)

Aminu, O. R., Forde, T. L., Ekwem, D., Johnson, P., Nelli, L., Mmbaga, B. T., Mshanga, D., Shand, M., Shirima, G., Walsh, M., Zadoks, R. N., Biek, R., Lembo, T. (2022) Participatory mapping identifies risk areas and environmental predictors of endemic anthrax in rural Africa. Scientific Reports, 12, (doi: 10.1038/s41598-022-14081-5)

Xu, J., Liu, Y., Lib, H., Tarashansky, A. J., Kalicki, C. H., Hung, R.-J., Hua, Y., Comjean, A., Kolluru, S. S., Wang, B., Quake, S. R., Luo, L., McMahon, A. P., Dow, J. A.T., Perrimon, N. (2022) Transcriptional and functional motifs defining renal function revealed by single-nucleus RNA sequencing. Proceedings of the National Academy of Sciences of the United States of America, 119, (doi: 10.1073/pnas.2203179119)

Carter, M. I. D., Boehme, L., Cronin, M. A., Duck, C. D., Grecian, W. J., Hastie, G. D., Jessopp, M., Matthiopoulos, J., McConnell, B. J., Miller, D. L., Morris, C. D., Moss, S. E. W., Thompson, D., Thompson, P. M., Russell, D. J. F. (2022) Sympatric seals, satellite tracking and protected areas: habitat-based distribution estimates for conservation and management. Frontiers in Marine Science, 9, (doi: 10.3389/fmars.2022.875869)

Mantilla Valdivieso, E. F., Ross, E. M., Raza, A., Naseem, M. N., Kamran, M., Hayes, B. J., Jonsson, N. N., James, P., Tabor, A. E. (2022) Transcriptional changes in the peripheral blood leukocytes from Brangus cattle before and after tick challenge with Rhipicephalus australis. BMC Genomics, 23, (doi: 10.1186/s12864-022-08686-3)

Huang, Y., Burchmore, R., Jonsson, N. N., Johnson, P. C.D., Eckersall, P. D. (2022) Technical report: In-gel sample preparation prior to proteomic analysis of bovine faeces increases protein identifications by removal of high molecular weight glycoproteins. Journal of Proteomics, 261, (doi: 10.1016/j.jprot.2022.104573)

Nadal, D., Hampson, K., Lembo, T., Rodrigues, R., Vanak, A. T., Cleaveland, S. (2022) Where rabies is not a disease. Bridging healthworlds to improve mutual understanding and prevention of rabies. Frontiers in Veterinary Science, 9, (doi: 10.3389/fvets.2022.867266)

Lefteri, D. A., Bryden, S. R., Pingen, M., Terry, S., McCafferty, A., Beswick, E. F., Georgiev, G., Van der Laan, M., Mastrullo, V., Campagnolo, P., Waterhouse, R. M., Varjak, M., Merits, A., Fragkoudis, R., Griffin, S., Shams, K., Pondeville, E., McKimmie, C. S. (2022) Mosquito saliva enhances virus infection through sialokinin-dependent vascular leakage. Proceedings of the National Academy of Sciences of the United States of America, 119, (doi: 10.1073/pnas.2114309119)

Ngowo, H. S., Okumu, F. O., Hape, E. E., Mshani, I. H., Ferguson, H. M., Matthiopoulos, J. (2022) Using Bayesian state-space models to understand the population dynamics of the dominant malaria vector, Anopheles funestus in rural Tanzania. Malaria Journal, 21, (doi: 10.1186/s12936-022-04189-4)

Kahamba, N. F., Finda, M., Ngowo, H., Msugupakulya, B. J., Baldini, F., Koekemoer, L. L., Ferguson, H. M., Okumu, F. O. (2022) Using ecological observations to improve malaria control in areas where Anopheles funestus is the dominant vector. Malaria Journal, 21, (doi: 10.1186/s12936-022-04198-3)

Brown, R., Salgado-Lynn, M., Jumail, A., Jalius, C., Chua, T.-H., Vythilingam, I., Ferguson, H. M. (2022) Exposure of primate reservoir hosts to mosquito vectors in Malaysian Borneo. EcoHealth, 19, pp. 233-245. (doi: 10.1007/s10393-022-01586-8)

Kibona, T., Buza, J., Shirima, G., Lankester, F., Ngongolo, K., Hughes, E., Cleaveland, S., Allan, K. J. (2022) The prevalence and determinants of Taenia multiceps infection (cerebral coenurosis) in small ruminants in Africa: a systematic review. Parasitologia, 2, pp. 137-146. (doi: 10.3390/parasitologia2020013)

Laing, R., Doyle, S. R., McIntyre, J., Maitland, K., Morrison, A., Bartley, D. J., Kaplan, R., Chaudhry, U., Sargison, N., Tait, A., Cotton, J. A., Britton, C., Devaney, E. (2022) Transcriptomic analyses implicate neuronal plasticity and chloride homeostasis in ivermectin resistance and response to treatment in a parasitic nematode. PLoS Pathogens, 18, (doi: 10.1371/journal.ppat.1010545)

Chadwick, F. J., Clark, J., Chowdhury, S., Chowdhury, T., Pascall, D. J., Haddou, Y., Andrecka, J., Kundegorski, M., Wilkie, C., Brum, E., Shirin, T., Alamgir, A.S.M., Rahman, M., Alam, A. N., Khan, F., Swallow, B., Mair, F. S., Illian, J., Trottter, C. L., Hill, D. L., Husmeier, D., Matthiopoulos, J., Hampson, K., Sania, A. (2022) Combining rapid antigen testing and syndromic surveillance improves community-based COVID-19 detection in a low-income country. Nature Communications, 13, (doi: 10.1038/s41467-022-30640-w)

Justen, H., Hasselmann, T., Illera, J. C., Delmore, K. E., Serrano, D., Flinks, H., Senzaki, M., Kawamura, K., Helm, B., Liedvogel, M. (2022) Population-specific association of Clock gene polymorphism with annual cycle timing in stonechats. Scientific Reports, 12, (doi: 10.1038/s41598-022-11158-z)

Lee, J.-M. et al. (2022) Genetic modifiers of Huntington disease differentially influence motor and cognitive domains. American Journal of Human Genetics, 109, pp. 885-899. (doi: 10.1016/j.ajhg.2022.03.004)

Dunn, R. E., Green, J. A., Wanless, S., Harris, M. P., Newell, M. A., Bogdanova, M. I., Horswill, C., Daunt, F., Matthiopoulos, J. (2022) Modelling and mapping how common guillemots balance their energy budgets over a full annual cycle. Functional Ecology, (doi: 10.1111/1365-2435.14059)

Zadoks, R. N., Barker, G. C., Benschop, J., Allan, K. J., Chaters, G., Cleaveland, S., Crump, J. A., Davis, M. A., Mmbaga, B. T., Prinsen, G., Thomas, K. T., Waldman, L., French, N. P. (2022) Spread of nontyphoidal Salmonella in the beef supply chain in northern Tanzania: Sensitivity in a probabilistic model integrating microbiological data and data from stakeholder interviews. Risk Analysis, 42, pp. 989-1006. (doi: 10.1111/risa.13826)

Dennis, T. P.W., Mable, B. K., Brunelle, B., Devault, A., Carter, R. W., Ling, C. L., Mmbaga, B. T., Halliday, J. E.B., Oravcova, K., Forde, T. L. (2022) Target-enrichment sequencing yields valuable genomic data for challenging-to-culture bacteria of public health importance. Microbial Genomics, 8, (doi: 10.1099/mgen.0.000836)

Voss, S. J., McGuinness, D. H., Weir, W., Sutton, D. G.M. (2022) A study comparing the healthy and diseased equine glandular gastric microbiota sampled with sheathed transendoscopic cytology brushes. Journal of Equine Veterinary Science, (doi: 10.1016/j.jevs.2022.104002)

Mancy, R., Rajeev, M., Lugelo, A., Brunker, K., Cleaveland, S., Ferguson, E. A., Hotopp, K., Kazwala, R., Magoto, M., Rysava, K., Haydon, D. T., Hampson, K. (2022) Rabies shows how scale of transmission can enable acute infections to persist at low prevalence. Science, 376, pp. 512-516. (doi: 10.1126/science.abn0713)

Fujiwara, M., Auty, H., Brown, I., Boden, L. (2022) Assessing the likelihood of high pathogenicity avian influenza incursion into the gamebird sector in Great Britain via designated hatcheries. Frontiers in Veterinary Science, 9, (doi: 10.3389/fvets.2022.877197)

Wragg, D. et al. (2022) A locus conferring tolerance to Theileria infection in African cattle. PLoS Genetics, 18, (doi: 10.1371/journal.pgen.1010099)

Selim, A., Weir, W., Khater, H. (2022) Prevalence and risk factors associated with tropical theileriosis in Egyptian dairy cattle. Veterinary World, 15, pp. 919-924. (doi: 10.14202/vetworld.2022.919-924)

Crawford, C. L., Antoniou, C., Komarek, L., Schultz, V., Donald, C. L., Montague, P., Barnett, S. C., Linington, C., Willison, H. J., Kohl, A., Coleman, M. P., Edgar, J. M. (2022) SARM1 depletion slows axon degeneration in a CNS model of neurotropic viral infection. Frontiers in Molecular Neuroscience, 15, (doi: 10.3389/fnmol.2022.860410)

McAllister, B. et al. (2022) Exome sequencing of individuals with Huntington’s disease implicates FAN1 nuclease activity in slowing CAG expansion and disease onset. Nature Neuroscience, 25, pp. 446-457. (doi: 10.1038/s41593-022-01033-5)

Lugelo, A., Hampson, K., Ferguson, E. A., Czupryna, A., Bigambo, M., Duamor, C. T., Kazwala, R., Johnson, P. C.D., Lankester, F. (2022) Development of dog vaccination strategies to maintain herd immunity against rabies. Viruses, 14, (doi: 10.3390/v14040830)

Matthiopoulos, J., Wakefield, E., Jeglinski, J. W.E., Furness, R. W., Trinder, M., Tyler, G., McCluskie, A., Allen, S., Braithwaite, J., Evans, T. (2022) Integrated modelling of seabird-habitat associations from multi-platform data: a review. Journal of Applied Ecology, 59, pp. 909-920. (doi: 10.1111/1365-2664.14114)

Ahmed, H., Yoder, J., De Glanville, W., Davis, A., Kibona, T. J., Cleaveland, S. (2022) Relationships between vaccinations, herd introductions, and livestock losses in Northern Tanzania. Agricultural and Resource Economics Review, 51, pp. 1-19. (doi: 10.1017/age.2021.11)

Nikbin, S., Almasi, F., Alenizi, D., Jenvey, C., Sloan, S., Preston, S., Piedrafita, D., Jonsson, N., Stear, M. (2022) The heritability of Nematodirus battus fecal egg counts. Parasitology, 149, pp. 555-561. (doi: 10.1017/S0031182022000014)

Davis, A., Virhia, J., Bunga, C., Alkara, S., Cleaveland, S., Yoder, J., Kinung’hi, S., Lankester, F. (2022) “Using the same hand”: the complex local perceptions of integrated one health based interventions in East Africa. PLoS Neglected Tropical Diseases, 16, (doi: 10.1371/journal.pntd.0010298)

Siria, D. J., Sanou, R., Mitton, J., Mwanga, E. P., Niang, A., Sare, I., Johnson, P. C.D., Foster, G. M., Belem, A. M.G., Wynne, K., Murray-Smith, R., Ferguson, H. M., González-Jiménez, M., Babayan, S. A., Diabaté, A., Okumu, F. O., Baldini, F. (2022) Rapid age-grading and species identification of natural mosquitoes for malaria surveillance. Nature Communications, 13, (doi: 10.1038/s41467-022-28980-8)

Krumrie, S., Capewell, P., Smith-Palmer, A., Mellor, D., Weir, W., Alexander, C. L. (2022) A scoping review of risk factors and transmission routes associated with human giardiasis outbreaks in high-income settings. Current Research in Parasitology and Vector-Borne Diseases, 2, (doi: 10.1016/j.crpvbd.2022.100084)

Li, H. et al. (2022) Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly. Science, 375, (doi: 10.1126/science.abk2432)

Bryden, S. R., Dunlop, J. I., Clarke, A. T., Fares, M., Pingen, M., Wu, Y., Willett, B. J., Patel, A. H., Gao, G. F., Kohl, A., Brennan, B. (2022) Exploration of immunological responses underpinning severe fever with thrombocytopenia syndrome virus infection reveals IL-6 as a therapeutic target in an immunocompromised mouse model. PNAS Nexus, 1, (doi: 10.1093/pnasnexus/pgac024)

Ferguson, H.J., Koh-Tan, H.H.C., Johnston, P.J., Wallace, R.J., Andonovic, I., Michie, C., McCartney, C.A., Strachan, E.M., Snelling, T.J., Harvey, C.D., Thomson, W., Jonsson, N. N. (2022) Light microscopic observations of the ruminal papillae of cattle on diets with divergent forage to cereal ratios. Animal, 16, (doi: 10.1016/j.animal.2022.100462)

Jonsson, N.N., MacLeod, M., Hayward, A., McNeilly, T., Ferguson, K.D., Skuce, P.J. (2022) Liver fluke in beef cattle – impact on production efficiency and associated greenhouse gas emissions estimated using causal inference methods. Preventive Veterinary Medicine, 200, (doi: 10.1016/j.prevetmed.2022.105579)

Nadal, D., Beeching, S., Cleaveland, S., Cronin, K., Hampson, K., Steenson, R., Abela-Ridder, B. (2022) Rabies and the pandemic: lessons for One Health. Transactions of the Royal Society of Tropical Medicine and Hygiene, 116, pp. 197-200. (doi: 10.1093/trstmh/trab123)

Howick, V. M., Peacock, L., Kay, C., Collett, C., Gibson, W., Lawniczak, M. K.N. (2022) Single-cell transcriptomics reveals expression profiles of Trypanosoma brucei sexual stages. PLoS Pathogens, 18, (doi: 10.1371/journal.ppat.1010346)

Haddou, Y., Mancy, R., Matthiopoulos, J., Spatharis, S., Dominoni, D. M. (2022) Widespread extinction debts and colonization credits in United States breeding bird communities. Nature Ecology and Evolution, 6, pp. 324-331. (doi: 10.1038/s41559-021-01653-3)

Fornace, K., Manin, B. O., Matthiopoulos, J., Ferguson, H. M., Drakeley, C., Ahmed, K., Khoon, K. T., Ewers, R. M., Daim, S., Chua, T. H. (2022) A protocol for a longitudinal, observational cohort study of infection and exposure to zoonotic and vector-borne diseases across a land-use gradient in Sabah, Malaysian Borneo: a socio-ecological systems approach. Wellcome Open Research, 7, (doi: 10.12688/wellcomeopenres.17678.1)

Forde, T. L., Dennis, T. P.W., Aminu, O. R., Harvey, W. T., Hassim, A., Kiwelu, I., Medvecky, M., Mshanga, D., Van Heerden, H., Vogel, A., Zadoks, R. N., Mmbaga, B. T., Lembo, T., Biek, R. (2022) Population genomics of Bacillus anthracis from an anthrax hyperendemic area reveals transmission processes across spatial scales and unexpected within-host diversity. Microbial Genomics, 8, (doi: 10.1099/mgen.0.000759)

Sambo, M., Ferguson, E. A., Abela-Ridder, B., Changalucha, J., Cleaveland, S., Lushasi, K., Mchau, G. J., Nanai, A., Nonga, H., Steenson, R., Johnson, P. C.D., Hampson, K. (2022) Scaling-up the delivery of dog vaccination campaigns against rabies in Tanzania. PLoS Neglected Tropical Diseases, 16, (doi: 10.1371/journal.pntd.0010124)

Holdsworth, P., Rehbein, S., Jonsson, N. N., Peter, R., Vercruysse, J., Fourie, J. (2022) World Association for the Advancement of Veterinary Parasitology (WAAVP) second edition: guideline for evaluating the efficacy of parasiticides against ectoparasites of ruminants. Veterinary Parasitology, 302, (doi: 10.1016/j.vetpar.2021.109613)

da Silva, S. J. R., de Lima, S. C., da Silva, R. C., Kohl, A., Pena, L. (2022) Viral load in COVID-19 patients: implications for prognosis and vaccine efficacy in the context of emerging SARS-CoV-2 variants. Frontiers in Medicine, 8, (doi: 10.3389/fmed.2021.836826)

Dominoni, D. M., de Jong, M., van Oers, K., O’Shaughnessy, P., Blackburn, G., Atema, E., Mateman, A. C., D’Amelio, P. B., Trost, L., Bellingham, M., Clark, J., Visser, M. E., Helm, B. (2022) Integrated molecular and behavioural data reveal deep circadian disruption in response to artificial light at night in male Great tits (Parus major) Scientific Reports, 12, (doi: 10.1038/s41598-022-05059-4)

Larcombe, S. D., Capewell, P., Jensen, K., Weir, W., Kinnaird, J., Glass, E. J., Shiels, B. R. (2022) Susceptibility to disease (tropical theileriosis) is associated with differential expression of host genes that possess motifs recognised by a pathogen DNA binding protein. PLoS ONE, 17, (doi: 10.1371/journal.pone.0262051)

Krause, S. A., Overend, G., Dow, J. A.T., Leader, D. P. (2022) FlyAtlas 2 in 2022: enhancements to the Drosophila melanogaster expression atlas. Nucleic Acids Research, 50, pp. D1010-D1015. (doi: 10.1093/nar/gkab971)

Gestuveo, R., Parry, R., Dickson, L. B., Lequime, S., Sreenu, V. B., Arnold, M. J., Khromykh, A. A., Schnettler, E., Lambrechts, L., Varjak, M., Kohl, A. (2022) Mutational analysis of Aedes aegypti Dicer 2 provides insights into the biogenesis of antiviral exogenous small interfering RNAs. PLoS Pathogens, 18, (doi: 10.1371/journal.ppat.1010202)

Grass, V., Hardy, E., Kobert, K., Talemi, S. R., Décembre, E., Guy, C., Markov, P. V., Kohl, A., Paris, M., Böckmann, A., Muñoz-González, S., Sherry, L., Höfer, T., Boussau, B., Dreux, M. (2022) Adaptation to host cell environment during experimental evolution of Zika virus. Communications Biology, 5, (doi: 10.1038/s42003-022-03902-y)

Pisharody, S., Rubach, M. P., Carugati, M., Nicholson, W. L., Perniciaro, J. L., Biggs, H. M., Maze, M. J., Hertz, J. T., Halliday, J. E. B., Allan, K. J., Mmbaga, B. T., Saganda, W., Lwezaula, B. F., Kazwala, R. R., Cleaveland, S., Maro, V. P., Crump, J. A. (2022) Incidence estimates of acute Q fever and spotted fever group rickettsioses, Kilimanjaro, Tanzania, from 2007 to 2008 and from 2012 to 2014. American Journal of Tropical Medicine and Hygiene, 106, pp. 494-503. (doi: 10.4269/ajtmh.20-1036)

McManus, R., Weir, W., Viora, L., Barker, R., Kim, Y., McBride, P., Yang, S., Boden, L. (2022) Investigating Gaps For Novel Animal Health Surveillance Data Within Scotland.

Veitch, N., Donald, C. (2021) Improving student engagement in the virtual world of disease diagnostics. The Creativity for Learning in Higher Education community

Francoeur, R., Atuhaire, A., Arinaitwe, M., Adriko, M., Ajambo, D., Nankasi, A., Babayan, S. A., Lamberton, P. H.L. (2021) ABO blood groups do not predict Schistosoma mansoni infection profiles in highly endemic villages of Uganda. Microorganisms, 9, (doi: 10.3390/microorganisms9122448)

Petrovan, S. O. et al. (2021) Post COVID‐19: a solution scan of options for preventing future zoonotic epidemics. Biological Reviews, 96, pp. 2694-2715. (doi: 10.1111/brv.12774)

Decker, C., Hanley, N., Czajkowski, M., Morrison, T., Munishi, L., Keyyu, J., Lankester, F., Cleaveland, S. (2021) Predicting uptake of a malignant catarrhal fever vaccine by pastoralists in northern Tanzania: opportunities for improving livelihoods and ecosystem health. Ecological Economics, 190, (doi: 10.1016/j.ecolecon.2021.107189)

Silva, S. J. R., Nascimento, J. C. F., Santos Reis, W. P. M., Silva, C. T. A., Silva, P. G., Mendes, R. P. G., Mendonça, A. A., Santos, B. N. R., Magalhães, J. J. F., Kohl, A., Pena, L. (2021) Widespread contamination of SARS‐CoV-2 on highly touched surfaces in Brazil during the second wave of the COVID ‐19 pandemic. Environmental Microbiology, 23, pp. 7382-7395. (doi: 10.1111/1462-2920.15855)

Veitch, N., Donald, C. (2021) Enhancing the student experience with a virtual reality disease diagnostics lab.

Hildersley, K. A., Mcneilly, T. N., Gillan, V., Otto, T. D., Löser, S., Gerbe, F., Jay, P., Maizels, R. M., Devaney, E., Britton, C. (2021) Tuft cells increase following ovine intestinal parasite infections and define evolutionarily conserved and divergent responses. Frontiers in Immunology, 12, (doi: 10.3389/fimmu.2021.781108)

Davis, A., Virhia, J., Buza, J., Crump, J. A., de Glanville, W. A., Halliday, J. E.B., Lankester, F., Mappi, T., Mnzava, K., Swai, E. S., Thomas, K. M., Toima, M., Cleaveland, S., Mmbaga, B., Sharp, J. (2021) "He who relies on his brother’s property dies poor": the complex narratives of livestock care in northern Tanzania. Frontiers in Veterinary Science, 8, (doi: 10.3389/fvets.2021.749561)

Allan, F. K., Sindoya, E., Adam, K. E., Byamungu, M., Lea, R. S., Lord, J. S., Mbata, G., Paxton, E., Mramba, F., Torr, S. J., Morrison, W. I., Handel, I., Morrison, L. J., Auty, H. K. (2021) A cross-sectional survey to establish Theileria parva prevalence and vector control at the wildlife-livestock interface, Northern Tanzania. Preventive Veterinary Medicine, 196, (doi: 10.1016/j.prevetmed.2021.105491)

Njau, E. P., Machuka, E. M., Cleaveland, S., Shirima, G. M., Kusiluka, L. J., Okoth, E. A., Pelle, R. (2021) African swine fever virus (ASFV): biology, genomics and genotypes circulating in sub-Saharan Africa. Viruses, 13, (doi: 10.3390/v13112285)

Girard, A., Cooper, A., Mabbott, S., Bradley, B., Asiala, S., Jamieson, L., Clucas, C., Capewell, P., Marchesi, F., Gibbins, M. P., Hentzschel, F., Marti, M., Quintana, J. F., Garside, P., Faulds, K., MacLeod, A., Graham, D. (2021) Raman spectroscopic analysis of skin as a diagnostic tool for Human African Trypanosomiasis. PLoS Pathogens, 17, (doi: 10.1371/journal.ppat.1010060)

Lushasi, K., Haynes, S., Ferguson, E. A., Changalucha, J., Cleaveland, S., Govella, N. J., Haydon, D. T., Sambo, M., Mchau, G. J., Mpoyla, E. A., Mtema, Z., Nonga, H. E., Steenson, R., Nouvellet, P., Donnelly, C. A., Hampson, K. (2021) Reservoir dynamics of rabies in south-east Tanzania and the roles of cross-species transmission and domestic dog vaccination. Journal of Applied Ecology, 58, pp. 2673-2685. (doi: 10.1111/1365-2664.13983)

Wakefield, E. D., Miller, D. L., Bond, S. L., le Bouard, F., Carvalho, P. C., Catry, P., Dilley, B. J., Fifield, D. A., Gjerdrum, C., González-Solís, J., Hogan, H., Laptikhovsky, V., Merkel, B., Miller, J. A.O., Miller, P. I., Pinder, S. J., Pipa, T., Ryan, P. M., Thompson, L. A., Thompson, P. M., Matthiopoulos, J. (2021) The summer distribution, habitat associations and abundance of seabirds in the sub-polar frontal zone of the Northwest Atlantic. Progress in Oceanography, 198, (doi: 10.1016/j.pocean.2021.102657)

Steketee, P. C., Giordani, F., Vincent, I. M., Crouch, K., Achcar, F., Dickens, N. J., Morrison, L. J., MacLeod, A., Barrett, M. P. (2021) Transcriptional differentiation of Trypanosoma brucei during in vitro acquisition of resistance to acoziborole. PLoS Neglected Tropical Diseases, 15, (doi: 10.1371/journal.pntd.0009939)

Nambunga, I. H., Msugupakulya, B. J., Hape, E. E., Mshani, I. H., Kahamba, N., Mkandawile, G., Mabula, D. M., Njalambaha, R. M., Kaindoa, E. W., Muyaga, L. L., Hermy, M. R.G., Tripet, F., Ferguson, H. M., Ngowo, H., Okumu, F. O. (2021) Wild populations of malaria vectors can mate both inside and outside of human buildings. Parasites and Vectors, 14, (doi: 10.1186/s13071-021-04989-8)

Crump, J. A., Thomas, K. M., Benschop, J., Knox, M. A., Wilkinson, D. A., Midwinter, A. C., Munyua, P., Ochieng, J. B., Bigogo, G. M., Verani, J. R., Widdowson, M.-A., Prinsen, G., Cleaveland, S., Karimuribo, E. D., Kazwala, R. R., Mmbaga, B. T., Swai, E. S., French, N. P., Zadoks, R. N. (2021) Investigating the meat pathway as a source of human nontyphoidal Salmonella bloodstream infections and diarrhea in East Africa. Clinical Infectious Diseases, 73, pp. e1570-e1578. (doi: 10.1093/cid/ciaa1153)

Belanche, A., Martín-García, A. I., Jiménez, E., Jonsson, N. N., Yañez-Ruiz, D. R. (2021) A novel ammoniation treatment of barley as a strategy to optimize rumen pH, feed degradability and microbial protein synthesis in sheep. Journal of the Science of Food and Agriculture, 101, pp. 5541-5549. (doi: 10.1002/jsfa.11205)

Persson, B. D., Nord, S., Lindqvist, R., Danskog, K., Överby, A. K., Kohl, A., Willison, H. J., Lenman, A., Arnberg, N. (2021) BAF45b Is required for efficient Zika virus infection of HAP1 cells. Viruses, 13, (doi: 10.3390/v13102007)

Rowland, H., Holding, E., Falces, P. M., Wissink-Argilaga, N., Stidworthy, M. F., Denk, D., Weir, W., Krumrie, S., Dunbar, D., Hopper, J. S. (2021) Canine coronavirus subtype 2a associated with outbreaks of fatal diarrhoea in bush dog (Speothos venaticus) groups. Schweizer Archiv fur Tierheilkunde, 164, pp. 661-671. (doi: 10.17236/sat00320)

Dow, J. A.T., Krause, S. A., Herzyk, P. (2021) Updates on ion and water transport by the Malpighian tubule. Current Opinion in Insect Science, 47, pp. 31-37. (doi: 10.1016/j.cois.2021.02.018)

Gandy, S., Kilbride, E., Biek, R., Millins, C., Gilbert, L. (2021) Experimental evidence for opposing effects of high deer density on tick-borne disease pathogen prevalence and hazard. Parasites and Vectors, 14, (doi: 10.1186/s13071-021-05000-0)

Shaw, A. E., Rihn, S. J., Mollentze, N., Wickenhagen, A., Stewart, D. G., Orton, R. J., Kuchi, S., Bakshi, S., Rodriguez Collados, M., Turnbull, M. L., Busby, J., Gu, Q., Smollett, K., Bamford, C. G.G., Sugrue, E., Johnson, P. C.D., Filipe da Silva, A., Castello, A., Streicker, D. G., Robertson, D. L., Palmarini, M., Wilson, S. J. (2021) The antiviral state has shaped the CpG composition of the vertebrate interferome to avoid self-targeting. PLoS Biology, 19, (doi: 10.1371/journal.pbio.3001352)

Sanou, A., Nelli, L., Guelbéogo, W. M., Cissé, F., Tapsoba, M., Ouédraogo, P., Sagnon, N.’f., Ranson, H., Matthiopoulos, J., Ferguson, H. M. (2021) Insecticide resistance and behavioural adaptation as a response to long-lasting insecticidal net deployment in malaria vectors in the Cascades region of Burkina Faso. Scientific Reports, 11, (doi: 10.1038/s41598-021-96759-w)

Mollentze, N., Babayan, S. A., Streicker, D. G. (2021) Identifying and prioritizing potential human-infecting viruses from their genome sequences. PLoS Biology, 19, (doi: 10.1371/journal.pbio.3001390)

Szemiel, A. M., Merits, A., Orton, R. J., MacLean, O. A., Pinto, R. M., Wickenhagen, A., Lieber, G., Turnbull, M. L., Wang, S., Furnon, W., Suarez, N. M., Mair, D., da Silva Filipe, A., Willett, B. J., Wilson, S. J., Patel, A. H., Thomson, E. C., Palmarini, M., Kohl, A., Stewart, M. E. (2021) In vitro selection of Remdesivir resistance suggests evolutionary predictability of SARS-CoV-2. PLoS Pathogens, 17, (doi: 10.1371/journal.ppat.1009929)

Baksmeier, C., Blundell, P., Steckel, J., Schultz, V., Gu, Q., Da Silva Filipe, A., Kohl, A., Linnington, C., Lu, D., Dell, A., Haslam, S., Wang, J., Czajkowsky, D., Goebels, N., Pleass, R. J. (2021) Modified recombinant human IgG1-Fc is superior to natural intravenous immunoglobulin at inhibiting immune-mediated demyelination. Immunology, 164, pp. 90-105. (doi: 10.1111/imm.13341)

Richards, S., Morrison, L. J., Torr, S. J., Barrett, M. P., Manangwa, O., Mramba, F., Auty, H. (2021) Pharma to farmer: field challenges of optimizing trypanocide use in African animal trypanosomiasis. Trends in Parasitology, 37, pp. 831-843. (doi: 10.1016/j.pt.2021.04.007)

Almire, F., Terhzaz, S., Terry, S., McFarlane, M., Gestuveo, R. J., Szemiel, A. M., Varjak, M., McDonald, A., Kohl, A., Pondeville, E. (2021) Sugar feeding protects against arboviral infection by enhancing gut immunity in the mosquito vector Aedes aegypti. PLoS Pathogens, 17, (doi: 10.1371/journal.ppat.1009870)

Vythilingam, I., Chua, T. H., Liew, J. W. K., O’Mannin, B., Ferguson, H. (2021) The vectors of Plasmodium knowlesi and other simian malarias Southeast Asia: challenges in malaria elimination. Elsevier

Koyama, T., Terhzaz, S., Naseem, M. T., Nagy, S., Rewitz, K., Dow, J. A.T., Davies, S. A., Halberg, K. V. (2021) A nutrient-responsive hormonal circuit mediates an inter-tissue program regulating metabolic homeostasis in adult Drosophila. Nature Communications, 12, (doi: 10.1038/s41467-021-25445-2)

Channumsin, M., Ciosi, M., Masiga, D., Auty, H., Turner, C. M., Kilbride, E., Mable, B. K. (2021) Blood meal analysis of tsetse flies (Glossina pallidipes: Glossinidae) reveals higher host fidelity on wild compared with domestic hosts. Wellcome Open Research, 6, (doi: 10.12688/wellcomeopenres.16978.1)

Asina, O. F., Noyes, H., Bucheton, B., MacLeod, A., Ngoyi, D. M., TrypanoGEN Group, (2021) SNPs in IL4 and IFNG show no protective associations with human African trypanosomiasis in the Democratic Republic of the Congo: a case-control study. AAS Open Research, 3, (doi: 10.12688/aasopenres.12999.1)

Auty, H., Swai, E.S., Virhia, J., Davis, A., de Glanville, W.A., Kibona, T., Lankester, F., Shirima, G., Cleaveland, S. (2021) How can we realise the full potential of animal health systems for delivering development and health outcomes? Revue scientifique et technique (International Office of Epizootics), 40, pp. 483-495. (doi: 10.20506/rst.40.2.3239)

Aarts, G., Mul, E., Fieberg, J., Brasseur, S., van Gils, J. A., Matthiopoulos, J., Riotte-Lambert, L. (2021) Individual-level memory is sufficient to create spatial segregation among neighboring colonies of central place foragers. American Naturalist, 198, pp. E37-E52. (doi: 10.1086/715014)

Bodenham, R. F., Mazeri, S., Cleaveland, S., Crump, J. A., Fasina, F. O., de Glanville, W. A., Haydon, D. T., Kazwala, R. R., Kibona, T. J., Maro, V. P., Maze, M. J., Mmbagna, B. T., Mtui-Malamsha, N. J., Shirima, G. M., Swai, E. S., Thomas, K. M., Bronsvoort, B. M. d., Halliday, J. E.B. (2021) Latent class evaluation of the performance of serological tests for exposure to Brucella spp. in cattle, sheep, and goats in Tanzania. PLoS Neglected Tropical Diseases, 15, (doi: 10.1371/journal.pntd.0009630)

Schultz, V., Barrie, J. A., Donald, C. L., Crawford, C. L., Mullin, M., Anderson, T. J., Solomon, T., Barnett, S. C., Linington, C., Kohl, A., Willison, H. J., Edgar, J. M. (2021) Oligodendrocytes are susceptible to Zika virus infection in a mouse model of perinatal exposure: implications for CNS complications. Glia, 69, pp. 2023-2036. (doi: 10.1002/glia.24010)

Sarker, S. K., Reeve, R., Matthiopoulos, J. (2021) Solving the fourth-corner problem: forecasting ecosystem primary production from spatial multispecies trait-based models. Ecological Monographs, 91, (doi: 10.1002/ecm.1454)

Duamor, C. T., Hampson, K., Lankester, F., Sambo, M., Kreppel, K., Wyke, S., Cleaveland, S. (2021) Use of lay vaccinators in animal vaccination programmes: a scoping review. PLoS Neglected Tropical Diseases, 15, (doi: 10.1371/journal.pntd.0009691)

Allan, F. K., Jayaraman, S., Paxton, E., Sindoya, E., Kibona, T., Fyumagwa, R., Mramba, F., Torr, S. J., Hemmink, J. D., Toye, P., Lembo, T., Handel, I., Auty, H. K., Morrison, W. I., Morrison, L. J. (2021) Antigenic diversity in Theileria parva populations from sympatric cattle and African buffalo analyzed using long read sequencing. Frontiers in Genetics, 12, (doi: 10.3389/fgene.2021.684127)

Jonsson, N. N., Cox, D. K., Piper, E. K., Mantilla Valdivieso, E. F., Constantinoiu, C., Jackson, L. A., Stear, M. J., Ross, E. M., Tabor, A. E. (2021) Allelic variation in protein tyrosine phosphatase receptor type-C in cattle influences erythrocyte, leukocyte and humoral responses to infestation with the cattle tick Rhipicephalus australis. Frontiers in Immunology, 12, (doi: 10.3389/fimmu.2021.675979)

Malijan, R. P. B., Mechan, F., Braganza Jr, J. C., Valle, K. M. R., Salazar, F. V., Torno, M. M., Aure, W. E., Backay, B. A., Espino, F. E., Torr, S. J., Fornace, K. M., Drakeley, C., Ferguson, H. M. (2021) The seasonal dynamics and biting behavior of potential Anopheles vectors of Plasmodium knowlesi in Palawan, Philippines. Parasites and Vectors, 14, (doi: 10.1186/s13071-021-04853-9)

Camara, M., Soumah, A. M.’m., Ilboudo, H., Travaillé, C., Clucas, C., Cooper, A., Kuispond Swar, N.-R., Camara, O., Sadissou, I., Calvo Alvarez, E., Crouzols, A., Bart, J.-M., Jamonneau, V., Camara, M., MacLeod, A., Bucheton, B., Rotureau, B. (2021) Extravascular dermal trypanosomes in suspected and confirmed cases of gambiense human African trypanosomiasis. Clinical Infectious Diseases, 73, pp. 12-20. (doi: 10.1093/cid/ciaa897)

Aldossari, S., Husmeier, D., Matthiopoulos, J. (2021) Generalized functional responses in habitat selection fitted by decision trees and random forests. Avestia Publishing

Jarrett, C., Powell, L. L., Claire, T. T. R., Tchoumbou, M., Helm, B. (2021) Moult of overwintering Wood Warblers Phylloscopus sibilatrix in an annual-cycle perspective. Journal of Ornithology, 162, pp. 645-653. (doi: 10.1007/s10336-021-01859-z)

Davison, C., Bowen, J.M., Michie, C., Rooke, J.A., Jonsson, N., Andonovic, I., Tachtatzis, C., Gilroy, M., Duthie, C.-A. (2021) Predicting feed intake using modelling based on feeding behaviour in finishing beef steers. Animal, 15, (doi: 10.1016/j.animal.2021.100231)

Njau, E. P., Domelevo Entfellner, J.-B., Machuka, E. M., Bochere, E. N., Cleaveland, S., Shirima, G. M., Kusiluka, L. J., Upton, C., Bishop, R. P., Pelle, R., Okoth, E. A. (2021) The first genotype II African swine fever virus isolated in Africa provides insight into the current Eurasian pandemic. Scientific Reports, 11, (doi: 10.1038/s41598-021-92593-2)

Raza, A., Schulz, B. L., Nouwens, A., Jackson, L. A., Piper, E. K., James, P., Jonsson, N. N., Tabor, A. E. (2021) Serum proteomes of Santa Gertrudis cattle before and after infestation with Rhipicephalus australis ticks. Parasite Immunology, 43, (doi: 10.1111/pim.12836)

Scherer, C., Knowles, J., Sreenu, V. B., Fredericks, A. C., Fuss, J., Maringer, K., Fernandez-Sesma, A., Merits, A., Varjak, M., Kohl, A., Schnettler, E. (2021) An Aedes aegypti-derived Ago2 knockout cell line to investigate arbovirus infections. Viruses, 13, (doi: 10.3390/v13061066)

Byrne, I., Aure, W., Manin, B. O., Vythilingam, I., Ferguson, H. M., Drakeley, C. J., Chua, T. H., Fornace, K. M. (2021) Environmental and spatial risk factors for the larval habitats of Plasmodium knowlesi vectors in Sabah, Malaysian Borneo. Scientific Reports, 11, (doi: 10.1038/s41598-021-90893-1)

Horswill, C., Manica, A., Daunt, F., Newell, M., Wanless, S., Wood, M., Matthiopoulos, J. (2021) Improving assessments of data-limited populations using life-history theory. Journal of Applied Ecology, 58, pp. 1225-1236. (doi: 10.1111/1365-2664.13863)

McFarlane, M., Laureti, M., Levée, T., Terry, S., Kohl, A., Pondeville, E. (2021) Improved transient silencing of gene expression in the mosquito female Aedes aegypti. Insect Molecular Biology, 30, pp. 355-365. (doi: 10.1111/imb.12700)

Mayanja, M. N., Mwiine, F., Lutwama, J. J., Sssekagiri, A., Egesa, M., Thomson, E. C., Kohl, A. (2021) Mosquito-borne arboviruses in Uganda: history, transmission and burden. Journal of General Virology, 102, (doi: 10.1099/jgv.0.001615)

Donald, C., Veitch, N., Edmond, A., Marks, L., Kirkwood, N., Carman, C., McDonnell, N., Macpherson, F. (2021) The Impact of Using Virtual Reality Lessons to Teach Online.

Real, E., Howick, V. M., Dahalan, F. A., Witmer, K., Cudini, J., Andradi-Brown, C., Blight, J., Davidson, M. S., Dogga, S. K., Reid, A. J., Baum, J., Lawniczak, M. K. N. (2021) A single-cell atlas of Plasmodium falciparum transmission through the mosquito. Nature Communications, 12, (doi: 10.1038/s41467-021-23434-z)

Meza, D. K., Broos, A., Becker, D. J., Behdenna, A., Willett, B. J., Viana, M., Streicker, D. G. (2021) Predicting the presence and titre of rabies virus‐neutralizing antibodies from low‐volume serum samples in low‐containment facilities. Transboundary and Emerging Diseases, 68, pp. 1564-1576. (doi: 10.1111/tbed.13826)

Salmón, P., Jacobs, A., Ahrén, D., Biard, C., Dingemanse, N. J., Dominoni, D. M., Helm, B., Lundberg, M., Senar, J. C., Sprau, P., Visser, M. E., Isaksson, C. (2021) Continent-wide genomic signatures of adaptation to urbanisation in a songbird across Europe. Nature Communications, 12, (doi: 10.1038/s41467-021-23027-w)

Gestuveo, R. J., Royle, J., Donald, C. L., Lamont, D. J., Hutchinson, E. C., Merits, A., Kohl, A., Varjak, M. (2021) Analysis of Zika virus capsid-Aedes aegypti mosquito interactome reveals pro-viral host factors critical for establishing infection. Nature Communications, 12, (doi: 10.1038/s41467-021-22966-8)

Hosie, M. J., Epifano, I., Herder, V., Orton, R. J., Stevenson, A., Johnson, N., MacDonald, E., Dunbar, D., McDonald, M., Howie, F., Tennant, B., Herrity, D., Da Silva Filipe, A., Streicker, D. G., COVID-19 Genomics UK (COG-UK) consortium, ., Willett, B. J., Murcia, P. R., Jarrett, R. F., Robertson, D. L., Weir, W. (2021) Detection of SARS-CoV-2 in respiratory samples from cats in the UK associated with human-to-cat transmission. Veterinary Record, 188, (doi: 10.1002/vetr.247)

Stokes, A. W., Catry, P., Matthiopoulos, J., Boldenow, M., Clark, T.J., Guest, A., Marengo, I., Wakefield, E. D. (2021) Combining survey and remotely sensed environmental data to estimate the habitat associations, abundance and distribution of breeding thin-billed prions Pachyptila belcheri and Wilson’s storm-petrels Oceanites oceanicus on a South Atlantic tussac island. Polar Biology, 44, pp. 809-821. (doi: 10.1007/s00300-021-02842-3)

Pagnossin, D., Smith, A., Weir, W., Crestani, C., Lindsay, D., Ure, R., Oravcova, K. (2021) Complete genome sequences of three invasive strains of Streptococcus pyogenes subtype emm5.23 isolated in Scotland. Microbiology Resource Announcements, 10, (doi: 10.1128/MRA.00101-21)

Burgon, J. D., Vences, M., Steinfartz, S., Bogaerts, S., Bonato, L., Donaire-Barroso, D., Martínez-Solano, I., Velo-Anton, G., Vieites, D. R., Mable, B. K., Elmer, K. R. (2021) Phylogenomic inference of species and subspecies diversity in the Palearctic salamander genus Salamandra. Molecular Phylogenetics and Evolution, 157, (doi: 10.1016/j.ympev.2020.107063)

Mwesigwa, S. et al. (2021) Unmapped exome reads implicate a role for Anelloviridae in childhood HIV-1 long-term non-progression. npj Genomic Medicine, 6, (doi: 10.1038/s41525-021-00185-w)

Gray, A., Capewell, P., Zadoks, R., Taggart, M. A., French, A. S., Katzer, F., Shiels, B. R., Weir, W. (2021) Wild deer in the United Kingdom are a potential reservoir for the livestock parasite. Current Research in Parasitology and Vector-Borne Diseases, 1, (doi: 10.1016/j.crpvbd.2021.100019)

Hughes, E. C., Amat, J. A.R., Haney, J., Parr, Y. A., Logan, N., Palmateer, N., Nickbakhsh, S., Ho, A., Cherepanov, P., Rosa, A., McAuley, A., Broos, A., Herbert, I., Arthur, U., Szemiel, A. M., Roustan, C., Dickson, E., Gunson, R. N., Viana, M., Willett, B. J., Murcia, P. R. (2021) Severe Acute Respiratory Syndrome Coronavirus 2 serosurveillance in a patient population reveals differences in virus exposure and antibody-mediated immunity according to host demography and healthcare setting. Journal of Infectious Diseases, 223, pp. 971-980. (doi: 10.1093/infdis/jiaa788)

Ngowo, H. S., Hape, E. E., Matthiopoulos, J., Ferguson, H. M., Okumu, F. O. (2021) Fitness characteristics of the malaria vector Anopheles funestus during an attempted laboratory colonization. Malaria Journal, 20, (doi: 10.1186/s12936-021-03677-3)

Hanlon, P., Chadwick, F., Shah, A., Wood, R., Minton, J., McCartney, G., Fischbacher, C., Mair, F. S., Husmeier, D., Matthiopoulos, J., McAllister, D. A. (2021) COVID-19 – exploring the implications of long-term condition type and extent of multimorbidity on years of life lost: a modelling study. Wellcome Open Research, 5, (doi: 10.12688/wellcomeopenres.15849.3)

Witmer, K., Dahalan, F. A., Metcalf, T., Talman, A. M., Howick, V. M., Lawniczak, M. K. N. (2021) Using scRNA-seq to identify transcriptional variation in the malaria parasite ookinete stage. Frontiers in Cellular and Infection Microbiology, 11, (doi: 10.3389/fcimb.2021.604129)

Ciosi, M., Cumming, S. A., Chatzi, A., Larson, E., Tottey, W., Lomeikaite, V., Hamilton, G., Wheeler, V. C., Pinto, R. M., Kwak, S., Morton, A. J., Monckton, D. G. (2021) Approaches to sequence the HTT CAG repeat expansion and quantify repeat length variation. Journal of Huntington's Disease, 10, pp. 53-74. (doi: 10.3233/jhd-200433)

Kronfeld-Schor, N., Stevenson, T., Nickbakhsh, S., Schernhammer, E., Dopico, X., Dayan, T., Martinez, M., Helm, B. (2021) Drivers of infectious disease seasonality: potential implications for COVID-19. Journal of Biological Rhythms, 36, pp. 35-54. (doi: 10.1177/0748730420987322)

Rihn, S. J. et al. (2021) A plasmid DNA-launched SARS-CoV-2 reverse genetics system and coronavirus toolkit for COVID-19 research. PLoS Biology, 19, (doi: 10.1371/journal.pbio.3001091)

Bergner, L. M., Mollentze, N., Orton, R. J., Tello, C., Broos, A., Biek, R., Streicker, D. G. (2021) Characterizing and evaluating the zoonotic potential of novel viruses discovered in vampire bats. Viruses, 13, (doi: 10.3390/v13020252)

Millins, C., Leo, W., MacInnes, I., Ferguson, J., Charlesworth, G., Nayar, D., Davison, R., Yardley, J., Kilbride, E., Huntley, S., Gilbert, L., Viana, M., Johnson, P., Biek, R. (2021) Emergence of Lyme disease on treeless islands in Scotland, UK. Emerging Infectious Diseases, 27, pp. 538-546. (doi: 10.3201/eid2702.203862)

Capewell, P., Krumrie, S., Katzer, F., Alexander, C. L., Weir, W. (2021) Molecular epidemiology of Giardia infections in the genomic era. Trends in Parasitology, 37, pp. 142-153. (doi: 10.1016/j.pt.2020.09.013)

Sweeny, A. R., Clerc, M., Pontifes, P. A., Venkatesan, S., Babayan, S. A., Pederson, A. B. (2021) Supplemented nutrition decreases helminth burden and increases drug efficacy in a natural host-helminth system. Proceedings of the Royal Society of London Series B: Biological Sciences, 288, (doi: 10.1098/rspb.2020.2722)

Bergner, L. M., Orton, R. J., Broos, A., Tello, C., Becker, D. J., Carrera, J. E., Patel, A. H., Biek, R., Streicker, D. G. (2021) Diversification of mammalian deltaviruses by host shifting. Proceedings of the National Academy of Sciences of the United States of America, 118, (doi: 10.1073/pnas.2019907118)

Gallo, G., Caignard, G., Badonnel, K., Chevreux, G., Terrier, S., Szemiel, A., Roman-Sosa, G., Binder, F., Gu, Q., Da Silva Filipe, A., Ulrich, R. G., Kohl, A., Vitour, D., Tordo, N., Ermonval, M. (2021) Interactions of viral proteins from pathogenic and low or non-pathogenic orthohantaviruses with human type I interferon signaling. Viruses, 13, (doi: 10.3390/v13010140)

Guglielmo, F., Sanou, A., Churcher, T., Ferguson, H. M., Ranson, H., Sherrard-Smith, E. (2021) Quantifying individual variability in exposure risk to mosquito bites in the Cascades region, Burkina Faso. Malaria Journal, 20, (doi: 10.1186/s12936-020-03538-5)

Schultz, V., Cumberworth, S. L., Gu, Q., Johnson, N., Donald, C. L., McCanney, G. A., Barrie, J. A., Da Silva Filipe, A., Linington, C., Willison, H. J., Edgar, J. M., Barnett, S. C., Kohl, A. (2021) Zika virus infection leads to demyelination and axonal injury in mature CNS cultures. Viruses, 13, (doi: 10.3390/v13010091)

Lagou, V. et al. (2021) Sex-dimorphic genetic effects and novel loci for fasting glucose and insulin variability. Nature Communications, 12, (doi: 10.1038/s41467-020-19366-9)

Fountain-Jones, N. M., Kraberger, S., Gagne, R. B., Trumbo, D. R., Salerno, P. E., Chris Funk, W., Crooks, K., Biek, R., Alldredge, M., Logan, K., Baele, G., Dellicour, S., Ernest, H. B., VandeWoude, S., Carver, S., Craft, M. E. (2021) Host relatedness and landscape connectivity shape pathogen spread in the puma, a large secretive carnivore. Communications Biology, 4, (doi: 10.1038/s42003-020-01548-2)

De Lorenzo, G., Tandavanitj, R., Doig, J., Setthapramote, C., Poggianella, M., Sanchez Velazquez, R., Scales, H., Edgar, J. M., Kohl, A., Brewer, J., Burrone, O. R., Patel, A. (2021) Zika virus-like particles bearing covalent dimer of envelope protein protect mice from lethal challenge. Journal of Virology, 95, (doi: 10.1128/JVI.01415-20)

Eifan, S., Hanif, A., Nour, I., Alqahtani, S., Eisa, Z. M., Dafalla, O., Kohl, A. (2021) Distribution and molecular identification of Culex pipiens and Culex tritaeniorhynchus as potential vectors of Rift Valley fever virus in Jazan, Saudi Arabia. Pathogens, 10, (doi: 10.3390/pathogens10101334)

Cuenca, P. R., Key, S., Jumail, A., Surendra, H., Ferguson, H. M., Drakeley, C., Fornace, K. (2021) Epidemiology of the zoonotic malaria Plasmodium knowlesi in changing landscapes. Advances in Parasitology, 113, pp. 225-286. (doi: 10.1016/bs.apar.2021.08.006)

Mancini, M. V., Ant, T. H., Herd, C. S., Martinez, J., Murdochy, S. M., Gingell, D. D., Mararo, E., Johnson, P. C. D., Sinkins, S. (2021) High temperature cycles result in maternal transmission and dengue infection differences between Wolbachia strains in Aedes aegypti. mBio, 12, (doi: 10.1128/mBio.00250-21)

Hyde, K., Sultana, N., Tran, A. C., Bileckaja, N., Donald, C. L., Kohl, A., Stanton, R. J., Strang, B. L. (2021) Limited replication of human cytomegalovirus in a trophoblast cell line. Journal of General Virology, 102, (doi: 10.1099/jgv.0.001683)

Parker, M. D. et al. (2021) Subgenomic RNA identification in SARS-CoV-2 genomic sequencing data. Genome Research, 31, pp. 645-658. (doi: 10.1101/gr.268110.120)

de Glanville, W. A., Davis, A., Allan, K. J., Buza, J., Claxton, J. R., Crump, J. A., Halliday, J. E.B., Johnson, P. C.D., Kibona, T. J., Mmbaga, B. T., Swai, E. S., Uzzell, C. B., Yoder, J., Sharp, J., Cleaveland, S. (2020) Classification and characterisation of livestock production systems in northern Tanzania. PLoS ONE, 15, (doi: 10.1371/journal.pone.0229478)

Gilbert, M. et al. (2020) Distemper, extinction and vaccination of the Amur tiger. Proceedings of the National Academy of Sciences of the United States of America, 117, pp. 31954-31962. (doi: 10.1073/pnas.2000153117)

Dornan, A.J., Halberg, K.A., Beuter, L.-K., Davies, S.-A., Dow, J.A.T. (2020) The septate junction protein Snakeskin is critical for epithelial barrier function and tissue homeostasis in the Malpighian tubules of adult Drosophila. bioRxiv, (doi: 10.1101/2020.12.14.422678)

Breton, É., Légaré, C., Overend, G., Guay, S.-P., Monckton, D., Mathieu, J., Gagnon, C., Richer, L., Gallais, B., Bouchard, L. (2020) DNA methylation at the DMPK gene locus is associated with cognitive functions in myotonic dystrophy type 1. Epigenomics, 12, pp. 2051-2064. (doi: 10.2217/epi-2020-0328)

Stokes, S., Almire, F., Tatham, M. H., McFarlane, S., Mertens, P., Pondeville, E., Boutell, C. (2020) The SUMOylation pathway suppresses arbovirus replication in Aedes aegypti cells. PLoS Pathogens, 16, (doi: 10.1371/journal.ppat.1009134)

Worsley-Tonks, K. E.L., Escobar, L. E., Biek, R., Castaneda-Guzman, M., Craft, M. E., Streicker, D. G., White, L. A., Fountain-Jones, N. M. (2020) Using host traits to predict reservoir host species of rabies virus. PLoS Neglected Tropical Diseases, 14, (doi: 10.1371/journal.pntd.0008940)

Aubry, F. et al. (2020) Enhanced Zika virus susceptibility of globally invasive Aedes aegypti populations. Science, 370, pp. 991-996. (doi: 10.1126/science.abd3663)

Mollentze, N., Streicker, D. G., Murcia, P. R., Hampson, K., Biek, R. (2020) Virulence mismatches in index hosts shape the outcomes of cross-species transmission. Proceedings of the National Academy of Sciences of the United States of America, 117, pp. 28859-28866. (doi: 10.1073/pnas.2006778117)

Awad, H., Gadalla, A. A.H., Postigo, M., Al-Hamidhi, S., Tageldin, M. H., Skariah, S., Sultan, A. A., Johnson, E. H., Shiels, B., Pain, A., Thompson, J., Babiker, H. A. (2020) Dynamics and within-host interaction of Theileria lestoquardi and T. ovis among naive sheep in Oman. Scientific Reports, 10, (doi: 10.1038/s41598-020-76844-2)

Doyle, S. R. et al. (2020) Genomic and transcriptomic variation defines the chromosome-scale assembly of Haemonchus contortus, a model gastrointestinal worm. Communications Biology, 3, (doi: 10.1038/s42003-020-01377-3)

Veitch, N., Webber, P., MacLeod, A., Adamson, W., Richardson, A., Mitchell, J. (2020) Parasite Street Science.

Weckworth, J. K., Davis, B. W., Dubovi, E., Fountain‐Jones, N., Packer, C., Cleaveland, S., Craft, M. E., Eblate, E., Schwartz, M., Mills, L. S., Roelke‐Parker, M. (2020) Cross‐species transmission and evolutionary dynamics of canine distemper virus during a spillover in African lions of Serengeti National Park. Molecular Ecology, 29, pp. 4308-4321. (doi: 10.1111/mec.15449)

Rostal, M. K., Cleaveland, S., Cordel, C., Staden, L. v., Matthews, L., Anyamba, A., Karesh, W. B., Paweska, J. T., Haydon, D. T., Ross, N. (2020) Farm-level risk factors of increased abortion and mortality in domestic ruminants during the 2010 Rift Valley fever outbreak in central South Africa. Pathogens, 9, (doi: 10.3390/pathogens9110914)

Sanchez Velazquez, R., de Lorenzo, G., Tandavanitj, R., Setthapramote, C., Bredenbeek, P. J., Bozzacco, L., MacDonald, M. R., Clark, J. J., Rice, C. M., Patel, A. H., Kohl, A., Varjak, M. (2020) Generation of a reporter yellow fever virus for high throughput antiviral assays. Antiviral Research, 183, (doi: 10.1016/j.antiviral.2020.104939)

Coultous, R., Leadon, D. P., Shiels, B., Sutton, D., Weir, W. (2020) Investigating the presence of equine piroplasmosis in Ireland. Veterinary Record, 187, pp. e97. (doi: 10.1136/vr.105937)

Camino, E., Cruz-Lopez, F., de Juan, L., Dominguez, L., Shiels, B., Coultous, R. M. (2020) Phylogenetic analysis and geographical distribution of Theileria equi and Babesia caballi sequences from horses residing in Spain. Ticks and Tick-borne Diseases, 11, (doi: 10.1016/j.ttbdis.2020.101521)

Donald, C. L., Siriyasatien, P., Kohl, A. (2020) Toxorhynchites species: A review of current knowledge. Insects, 11, (doi: 10.3390/insects11110747)

Lankester, F., Davis, A., Kinung’hi, S., Yoder, J., Bunga, C., Alkara, S., Mzimbiri, I., Cleaveland, S., Palmer, G. H. (2020) An integrated health delivery platform, targeting soil-transmitted helminths (STH) and canine mediated human rabies, results in cost savings and increased breadth of treatment for STH in remote communities in Tanzania. BMC Public Health, 19, (doi: 10.1186/s12889-019-7737-6)

Choudhury, A. et al. (2020) High-depth African genomes inform human migration and health. Nature, 586, pp. 741-748. (doi: 10.1038/s41586-020-2859-7)

Rysava, K., Mancero, T., Caldas, E., de Carvalho, M. F., Castro, A. P. B., Gutiérrez, V., Haydon, D. T., Johnson, P. C. D., Mancy, R., Montebello, L. R., Rocha, S. M., Gonzalez Roldan, J. F., Vigilato, M. A. N., Vilas, V. D. R., Hampson, K. (2020) Towards the elimination of dog-mediated rabies: development and application of an evidence-based management tool. BMC Infectious Diseases, 20, (doi: 10.1186/s12879-020-05457-x)

Fletcher, N. F., Meredith, L. W., Tidswell, E. L., Bryden, S. R., Gonçalves-Carneiro, D., Chaudhry, Y., Shannon-Lowe, C., Folan, M. A., Lefteri, D. A., Pingen, M., Bailey, D., McKimmie, C. S., Baird, A. W. (2020) A novel antiviral formulation inhibits a range of enveloped viruses. Journal of General Virology, 101, pp. 1090-1102. (doi: 10.1099/jgv.0.001472)

Mittell, E. A., Cobbold, C. A., Ijaz, U. Z., Kilbride, E. A., Moore, K. A., Mable, B. K. (2020) Feral populations of Brassica oleracea along Atlantic coasts in western Europe. Ecology and Evolution, 10, pp. 11810-11825. (doi: 10.1002/ece3.6821)

Allan, K. J., Maze, M. J., Galloway, R. L., Rubach, M. P., Biggs, H. M., Halliday, J. E.B., Cleaveland, S., Saganda, W., Lwezaula, B. F., Kazwala, R. R., Mmbaga, B. T., Marro, V. P., Crump, J. A. (2020) Molecular detection and typing of pathogenic Leptospira in febrile patients and phylogenetic comparison with Leptospira detected among animals in Tanzania. American Journal of Tropical Medicine and Hygiene, 103, pp. 1427-1434. (doi: 10.4269/ajtmh.19-0703)

Dickinson, E. R., Millins, C., Biek, R. (2020) Sampling scale and season influence the observed relationship between the density of deer and questing Ixodes ricinus nymphs. Parasites and Vectors, 13, (doi: 10.1186/s13071-020-04369-8)

Clark, J. J., Gilray, J., Orton, R. J., Baird, M., Wilkie, G., da Silva Filipe, A., Johnson, N., McInnes, C. J., Kohl, A., Biek, R. (2020) Population genomics of louping ill virus provide new insights into the evolution of tick-borne flaviviruses. PLoS Neglected Tropical Diseases, 14, (doi: 10.1371/journal.pntd.0008133)

da Silva, S. J. R., da Silva, C. T. A., Guarines, K. M., Mendes, R. P. G., Pardee, K., Kohl, A., Pena, L. (2020) Clinical and laboratory diagnosis of SARS-CoV-2, the virus causing COVID-19. ACS Infectious Diseases, 6, pp. 2319-2336. (doi: 10.1021/acsinfecdis.0c00274)

Lu, A. T., Narayan, P., Grant, M. J., Langfelder, P., Wang, N., Kwak, S., Wilkinson, H., Chen, R. Z., Chen, J., Bawden, C. S., Rudiger, S. R., Ciosi, M., Chatzi, A., Maxwell, A., Hore, T. A., Aaronson, J., Rosinski, J., Preiss, A., Vogt, T. A., Coppola, G., Monckton, D., Snell, R. G., Yang, X. W., Horvarth, S. (2020) DNA methylation study of Huntington's disease and motor progression in patients and in animal models. Nature Communications, 11, (doi: 10.1038/s41467-020-18255-5)

Boden, L. A., Auty, H. K., Delgado, A., Grewar, J. D., Hagerman, A. D., Porphyre, T., Russell, G. C. (2020) Editorial: risk-based evidence for animal health policy. Frontiers in Veterinary Science, 7, (doi: 10.3389/fvets.2020.00595)

Kreppel, K.S., Viana, M., Main, B.J., Johnson, P.C.D., Govella, N.J., Lee, Y., Maliti, D., Meza, F.C., Lanzaro, G.C., Ferguson, H.M. (2020) Emergence of behavioural avoidance strategies of malaria vectors in areas of high LLIN coverage in Tanzania. Scientific Reports, 10, (doi: 10.1038/s41598-020-71187-4)

Mulindwa, J. et al. (2020) High levels of genetic diversity within Nilo-Saharan populations: implications for human adaptation. American Journal of Human Genetics, 107, pp. 473-486. (doi: 10.1016/j.ajhg.2020.07.007)

Brown, R., Chua, T. H., Fornace, K., Drakeley, C., Vythilingam, I., Ferguson, H. M. (2020) Human exposure to zoonotic malaria vectors in village, farm and forest habitats in Sabah, Malaysian Borneo. PLoS Neglected Tropical Diseases, 14, (doi: 10.1371/journal.pntd.0008617)

Herzog, C. M., de Glanville, W. A., Willett, B. J., Cattadori, I. M., Kapur, V., Hudson, P. J., Buza, J., Swai, E. S., Cleaveland, S., Bjørnstad, O. N. (2020) Peste des petits ruminants virus transmission scaling and husbandry practices that contribute to increased transmission risk: an investigation among sheep, goats, and cattle in Northern Tanzania. Viruses, 12, (doi: 10.3390/v12090930)

Aminu, O. R., Lembo, T., Zadoks, R. N., Biek, R., Lewis, S., Kiwelu, I., Mmbaga, B. T., Mshanga, D., Shirima, G., Denwood, M., Forde, T. L. (2020) Practical and effective diagnosis of animal anthrax in endemic low-resource settings. PLoS Neglected Tropical Diseases, 14, (doi: 10.1371/journal.pntd.0008655)

Hayden, L., Semenoff, T., Schultz, V., Merz, S. F., Chapple, K. J., Rodriguez, M., Warrington, A. E., Shi, X., McKimmie, C. S., Edgar, J. M., Thümmler, K., Linington, C., Pingen, M. (2020) Lipid-specific IgMs induce antiviral responses in the CNS: implications for progressive multifocal leukoencephalopathy in multiple sclerosis. Acta Neuropathologica Communications, 8, (doi: 10.1186/s40478-020-01011-7)

Lord, J. S., Lea, R. S., Allan, F. K., Byamungu, M., Hall, D. R., Lingley, J., Mramba, F., Paxton, E., Vale, G. A., Hargrove, J. W., Morrison, L. J., Torr, S. J., Auty, H. K. (2020) Assessing the effect of insecticide-treated cattle on tsetse abundance and trypanosome transmission at the wildlife-livestock interface in Serengeti, Tanzania. PLoS Neglected Tropical Diseases, 14, (doi: 10.1371/journal.pntd.0008288)

Maze, M. J., Sharples, K. J., Allan, K. J., Biggs, H. M., Cash-Goldwasser, S., Galloway, R. L., De Glanville, W. A., Halliday, J. E.B., Kazwala, R. R., Kibona, T., Mmbaga, B. T., Maro, V. P., Rubach, M. P., Cleaveland, S., Crump, J. A. (2020) Estimating acute human leptospirosis incidence in northern Tanzania using sentinel site and community behavioural surveillance. Zoonoses and Public Health, 67, pp. 496-505. (doi: 10.1111/zph.12712)

Aldossari, S., Matthiopoulos, J., Husmeier, D. (2020) Statistical Modelling of Habitat Selection. Servicio Editorial de la Universidad del País Vasco

Michie, C., Andonovic, I., Davison, C., Hamilton, A., Tachtatzis, C., Jonsson, N., Duthie, C.-A., Bowen, J., Gilroy, M. (2020) The Internet of Things enhancing animal welfare and farm operational efficiency. Journal of Dairy Research, 87, pp. 20-27. (doi: 10.1017/S0022029920000680)

Mira, A., Unlu, A. H., Bilgic, H. B., Bakirci, S., Hacilarlioglu, S., Karagenc, T., Carletti, T., Weir, W., Shiels, B., Shkap, V., Aktas, M., Florin‐Christensen, M., Schnittger, L. (2020) High genetic diversity and differentiation of the Babesia ovis population in Turkey. Transboundary and Emerging Diseases, 67, pp. 26-35. (doi: 10.1111/tbed.13174)

Britton, C., Laing, R., Devaney, E. (2020) Small RNAs in parasitic nematodes - forms and functions. Parasitology, 147, pp. 855-864. (doi: 10.1017/S0031182019001689)

Varjak, M., Gestuveo, R. J., Burchmore, R., Schnettler, E., Kohl, A. (2020) aBravo is a novel Aedes aegypti antiviral protein that interacts with, but acts independently of, the exogenous siRNA pathway effector Dicer 2. Viruses, 12, (doi: 10.3390/v12070748)

Waldman, L., Hrynick, T. A., Benschop, J., Cleaveland, S., Crump, J. A., Davis, M. A., Mariki, B., Mmbaga, B. T., Mtui-Malamsha, N., Prinsen, G., Sharp, J., Swai, E. S., Thomas, K., Zadoks, R. (2020) Meat safety in northern Tanzania: inspectors’ and slaughter workers’ risk perceptions and management. Frontiers in Veterinary Science, 7, (doi: 10.3389/fvets.2020.00309)

Schilling, M., Bridgeman, A., Gray, N., Hertzog, J., Hublitz, P., Kohl, A., Rehwinkel, J. (2020) RIG-I plays a dominant role in the induction of transcriptional changes in Zika virus-infected cells and protects from virus-induced cell death. Cells, 9, (doi: 10.3390/cells9061476)

Alfituri, O. A., Quintana, J. F., MacLeod, A., Garside, P., Benson, R. A., Brewer, J. M., Mabbott, N. A., Morrison, L. J., Capewell, P. (2020) To the skin and beyond: the immune response to African trypanosomes as they enter and exit the vertebrate host. Frontiers in Immunology, 11, (doi: 10.3389/fimmu.2020.01250)

Jarrett, C., Powell, L., McDevitt, H., Helm, B., Welch, A. J. (2020) Bitter fruits of hard labour: Diet metabarcoding and telemetry reveal that urban songbirds travel further for lower-quality food. Oecologia, 193, pp. 377-388. (doi: 10.1007/s00442-020-04678-w)

Wilson, G. J., Fukuoka, A., Love, S. R., Kim, J., Pingen, M., Hayes, A. J., Graham, G. J. (2020) Chemokine receptors coordinately regulate macrophage dynamics and mammary gland development. Development, 147, (doi: 10.1242/dev.187815)

Murcia, P., Streiker, D., Da Silva Filipe, A., Robertson, D., Jarrett, R., Willett, B., Hosie, M., Biek, R., Allan, K., Weir, W. (2020) Send cat and dog samples to test for SARS-CoV-2. Veterinary Record, 186, pp. 571. (doi: 10.1136/vr.m2019)

Matthiopoulos, J., Fieberg, J., Aarts, G., Barraquand, F., Kendall, B. E. (2020) Within reach? Habitat availability as a function of individual mobility and spatial structuring. American Naturalist, 195, pp. 1009-1026. (doi: 10.1086/708519)

Baker, L., Matthiopoulos, J., Müller, T., Freuling, C., Hampson, K. (2020) Local rabies transmission and regional spatial coupling in European foxes. PLoS ONE, 15, (doi: 10.1371/journal.pone.0220592)

Capewell, P., Rupp, A., Fuentes, M., McDonald, M., Weir, W. (2020) Fatal Clostridium sordellii-mediated hemorrhagic and necrotizing gastroenteropathy in a dog: case report. BMC Veterinary Research, 16, (doi: 10.1186/s12917-020-02362-y)

Brunker, K. et al. (2020) Rapid in-country sequencing of whole virus genomes to inform rabies elimination programmes. Wellcome Open Research, 5, (doi: 10.12688/wellcomeopenres.15518.2)

Ellis, N. et al. (2020) Genetic risk underlying psychiatric and cognitive symptoms in Huntington’s Disease. Biological Psychiatry, 87, pp. 857-865. (doi: 10.1016/j.biopsych.2019.12.010)

Nelli, L., Ferguson, H. M., Matthiopoulos, J. (2020) Achieving explanatory depth and spatial breadth in infectious disease modelling: integrating active and passive case surveillance. Statistical Methods in Medical Research, 29, pp. 1273-1287. (doi: 10.1177/0962280219856380)

Coultous, R., McDonald, M., Raftery, A. G., Shiels, B., Sutton, D. G.M., Weir, W. (2020) Analysis of Theileria equi diversity in The Gambia using a novel genotyping method. Transboundary and Emerging Diseases, 67, pp. 1213-1221. (doi: 10.1111/tbed.13454)

Hansell, C. A.H., Love, S., Pingen, M., Wilson, G. J., Macleod, M., Graham, G. (2020) Analysis of lung stromal expression of the atypical chemokine receptor ACKR2 reveals unanticipated expression in blood endothelial cells. European Journal of Immunology, 50, pp. 666-675. (doi: 10.1002/eji.201948374)

Francesio, A., Viora, L., Denwood, M. J., Tulley, W., Brady, N., Hastie, P., Hamilton, A., Davison, C., Michie, C., Jonsson, N. N. (2020) Contrasting effects of high-starch and high-sugar diets on ruminal function in cattle. Journal of Dairy Research, 87, pp. 175-183. (doi: 10.1017/S002202992000031X)

Royle, J., Ramírez-Santana, C., Akpunarlieva, S., Donald, C. L., Gestuveo, R. J., Anaya, J.-M., Merits, A., Burchmore, R., Kohl, A., Varjak, M. (2020) Glucose-regulated protein 78 interacts with Zika virus envelope protein and contributes to a productive infection. Viruses, 12, (doi: 10.3390/v12050524)

Pondeville, E., Puchot, N., Parvy, J.-P., Carissimo, G., Poidevin, M., Waterhouse, R. M., Marois, E., Bourgouin, C. (2020) Hemocyte-targeted gene expression in the female malaria mosquito using the hemolectin promoter from Drosophila. Insect Biochemistry and Molecular Biology, 120, (doi: 10.1016/j.ibmb.2020.103339)

Pascall, D. J., Nomikou, K., Breard, E., Zientara, S., Da Silva Filipe, A., Hoffmann, B., Jacquot, M., Singer, J. B., De Clercq, K., Bøtner, A., Sailleau, C., Viarouge, C., Batten, C., Puggioni, G., Ligio, C., Savini, G., van Rijn, P. A., Mertens, P. P.C., Biek, R., Palmarini, M. (2020) "Frozen evolution" of an RNA virus suggests accidental release as a potential cause of arbovirus re-emergence. PLoS Biology, 18, (doi: 10.1371/journal.pbio.3000673)

Bessell, P. R., Auty, H. K., Roberts, H., McKendrick, I. J., Bronsvoort, B. M. d. C., Boden, L. A. (2020) A tool for prioritizing livestock disease threats to Scotland. Frontiers in Veterinary Science, 7, (doi: 10.3389/fvets.2020.00223)

Nelli, L., Guelbeogo, M., Ferguson, H. M., Ouattara, D., Tiono, A., N’Fale, S., Matthiopoulos, J. (2020) Distance sampling for epidemiology: an interactive tool for estimating under-reporting of cases from clinic data. International Journal of Health Geographics, 19, (doi: 10.1186/s12942-020-00209-1)

Prinsen, G., Benschop, J., Cleaveland, S., Crump, J. A., French, N. P., Hrynick, T., Mariki, B., Mmbaga, B. T., Sharp, J. P., Swai, E. S., Thomas, K. M., Zadoks, R. N., Waldman, L. (2020) Meat safety in Tanzania’s value chain: experiences, explanations and expectations in butcheries and eateries. International Journal of Environmental Research and Public Health, 17, (doi: 10.3390/ijerph17082833)

Parry, R., Naccache, F., Ndiaye, E. H., Fall, G., Castelli, I., Lühken, R., Medlock, J., Cull, B., Hesson, J. C., Montarsi, F., Failloux, A.-B., Kohl, A., Schnettler, E., Diallo, M., Asgari, S., Dietrich, I., Becker, S. C. (2020) Identification and RNAi profile of a novel iflavirus infecting Senegalese Aedes vexans arabiensis mosquitoes. Viruses, 12, (doi: 10.3390/v12040440)

Kurkiewicz, A., Cooper, A., McIlwaine, E., Cumming, S. A., Adam, B., Krahe, R., Puymirat, J., Schoser, B., Timchenko, L., Ashizawa, T., Thornton, C. A., Rogers, S., McClure, J. D., Monckton, D. G. (2020) Towards development of a statistical framework to evaluate myotonic dystrophy type 1 mRNA biomarkers in the context of a clinical trial. PLoS ONE, 15, (doi: 10.1371/journal.pone.0231000)

Nyangiri, O. A., Noyes, H., Mulindwa, J., Ilboudo, H., Kabore, J. W., Ahouty, B., Koffi, M., Asina, O. F., Ngoyi, D. M., Ofon, E., Simo, G., Kimuda, M. P., Enyaru, J., Alibu, V. P., Kamoto, K., Chisi, J., Simuunza, M., Camara, M., Sidibe, I., MacLeod, A., Bucheton, B., Hall, N., Hertz-Fowler, C., Matovu, E. (2020) Copy number variation in human genomes from three major ethno-linguistic groups in Africa. BMC Genomics, 21, (doi: 10.1186/s12864-020-6669-y)

McFarlane, M., Almire, F., Kean, J., Donald, C. L., McDonald, A., Wee, B., Lauréti, M., Varjak, M., Terry, S., Vazeille, M., Gestuveo, R. J., Dietrich, I., Loney, C., Failloux, A.-B., Schnettler, E., Pondeville, E., Kohl, A. (2020) The Aedes aegypti Domino orthologue p400 regulates antiviral exogenous small interfering RNA pathway activity and ago-2 expression. mSphere, 5, (doi: 10.1128/mSphere.00081-20)

Alexander, A. J.T., Confort, M.-P., Desloire, S., Dunlop, J. I., Kuchi, S., Sreenu, V. B., Mair, D., Wilkie, G. S., Da Silva Filipe, A., Brennan, B., Ratinier, M., Arnaud, F., Kohl, A. (2020) Development of a reverse genetics system for Toscana virus (lineage A) Viruses, 12, (doi: 10.3390/v12040411)

Marima, J. K., Nel, C. L., Marufu, M. C., Jonsson, N. N., Dube, B., Dzama, K. (2020) A genetic and immunological comparison of tick-resistance in beef cattle following artificial infestation with Rhipicephalus ticks. Experimental and Applied Acarology, 80, pp. 569-590. (doi: 10.1007/s10493-020-00480-8)

Mayanja, M. N., Mwiine, F. N., Kohl, A., Thomson, E. C., Lutwama, J. J. (2020) An update on the mosquito species composition and diversity in western and North Western Uganda. Journal of Entomology and Zoology Studies, 8, pp. 1074-1086.

Winder, L. A., White, S. A., Nord, A., Helm, B., McCafferty, D. J. (2020) Body surface temperature responses to food restriction in wild and captive great tits. Journal of Experimental Biology, 223, (doi: 10.1242/jeb.220046)

Allen, A., Guerrero, J., Byrne, A., Lavery, J., Presho, E., Courcier, E., O'Keeffe, J., Fogarty, U., Delahay, R., Wilson, G., Newman, C., Buesching, C., Silk, M., O'Meara, D., Skuce, R., Biek, R., McDonald, R. A. (2020) Genetic evidence further elucidates the history and extent of badger introductions from Great Britain into Ireland. Royal Society Open Science, 7, (doi: 10.1098/rsos.200288)

Åkesson, S., Helm, B. (2020) Endogenous programs and flexibility in bird migration. Frontiers in Ecology and Evolution, 8, (doi: 10.3389/fevo.2020.00078)

Forde, T. L., Kollanandi Ratheesh, N., Harvey, W. T., Thomson, J. R., Williamson, S., Biek, R., Opriessnig, T. (2020) Genomic and immunogenic protein diversity of Erysipelothrix rhusiopathiae isolated from pigs in Great Britain: implications for vaccine protection. Frontiers in Microbiology, 11, (doi: 10.3389/fmicb.2020.00418)

Crowe, J., Lumb, F. E., Doonan, J., Broussard, M., Tarafdar, A., Pineda, M. A., Landabaso, C., Mulvey, L., Hoskisson, P. A., Babayan, S. A., Selman, C., Harnett, W., Harnett, M. (2020) The parasitic worm product ES-62 promotes health- and life-span in a high calorie diet-accelerated mouse model of ageing. PLoS Pathogens, 16, (doi: 10.1371/journal.ppat.1008391)

Boden, L. A., Voas, S., Mellor, D., Auty, H. (2020) EPIC, Scottish Government's Centre of Expertise in Animal Disease Outbreaks: a model for provision of risk-based evidence to policy. Frontiers in Veterinary Science, 7, (doi: 10.3389/fvets.2020.00119)

Hampson, K., Abela-Ridder, B., Changalucha, J., Cleaveland, S., Knopf, L., Lushasi, K., Miranda, M. E., Thumbi, S.M., Rysava, K., Tenzin, T., Tildesley, M., Wallace, R., Trotter, C. (2020) Zero human deaths from dog-mediated rabies by 2030: perspectives from quantitative and mathematical modelling. Gates Open Research, 3, (doi: 10.12688/gatesopenres.13074.2)

Talman, A. M., Ouologuem, D. T. D., Love, K., Howick, V. M., Mulamba, C., Haidara, A., Dara, N., Sylla, D., Sacko, A., Coulibaly, M. M., Dao, F., Sangare, C. P. O., Djimde, A., Lawniczak, M. K. N. (2020) Uptake of plasmodium falciparum gametocytes during mosquito bloodmeal by direct and membrane feeding. Frontiers in Microbiology, 11, (doi: 10.3389/fmicb.2020.00246)

Jonsson, N. N., Gilbert, G., MacGillivray, F. S. (2020) Livestock management in red-billed chough feeding habitat in Great Britain and the Isle of Man. Rangeland Ecology and Management, 73, pp. 216-223. (doi: 10.1016/j.rama.2019.10.009)

Nickbakhsh, S., Mair, C., Matthews, L., Reeve, R., Johnson, P.C.D., Thorburn, F., Von Wissmann, B., McMenamin, J., Gunson, R.N., Murcia, P.R. (2020) Reply to Kloepfer and Gern: Independent studies suggest an arms race between influenza and rhinovirus: what next? Proceedings of the National Academy of Sciences of the United States of America, 117, pp. 6988-6989. (doi: 10.1073/pnas.2000903117)

Thomas, K. M., de Glanville, W. A., Barker, G. C., Benschop, J., Buzza, J. J., Cleaveland, S., Davis, M. A., French, N. P., Mmbaga, B. T., Prinsen, G., Swai, E. S., Zadoks, R. N., Crump, J. A. (2020) Prevalence of Campylobacter and Salmonella in African food animals and meat: a systematic review and meta-analysis. International Journal of Food Microbiology, 315, (doi: 10.1016/j.ijfoodmicro.2019.108382)

Herzog, C.M., De Glanville, W.A., Willett, B.J., Cattadori, I.M., Kapur, V., Hudson, P.J., Buza, J., Swai, E.S., Cleaveland, S., Bjørnstad, O.N. (2020) Identifying age cohorts responsible for Peste Des Petits Ruminants Virus transmission among sheep, goats, and cattle in Northern Tanzania. Viruses, 12, (doi: 10.3390/v12020186)

Ballester‐Lopez, A., Koehorst, E., Almendrote, M., Martínez‐Piñeiro, A., Lucente, G., Linares‐Pardo, I., Núñez‐Manchón, J., Guanyabens, N., Cano, A., Lucia, A., Overend, G., Cumming, S. A., Monckton, D. G., Casadevall, T., Isern, I., Sánchez‐Ojanguren, J., Planas, A., Rodríguez‐Palmero, A., Monlleó‐Neila, L., Pintos‐Morell, G., Ramos‐Fransi, A., Coll‐Cantí, J., Nogales‐Gadea, G. (2020) A DM1 family with interruptions associated with atypical symptoms and late onset but not with a milder phenotype. Human Mutation, 41, pp. 420-431. (doi: 10.1002/humu.23932)

Riotte-Lambert, L., Matthiopoulos, J. (2020) Environmental predictability as a cause and consequence of animal movement. Trends in Ecology and Evolution, 35, pp. 163-174. (doi: 10.1016/j.tree.2019.09.009)

Pezzi, L. et al. (2020) GloPID-R report on chikungunya, o'nyong-nyong and Mayaro virus, part 5: entomological aspects. Antiviral Research, 174, (doi: 10.1016/j.antiviral.2019.104670)

Cohen, E., Sawyer, J. K., Peterson, N. G., Dow, J. A.T., Fox, D. T. (2020) Physiology, development, and disease modeling in the Drosophila excretory system. Genetics, 214, pp. 235-264. (doi: 10.1534/genetics.119.302289)

Halliday, J. E.B., Carugati, M., Snavely, M. E., Allan, K. J., Beamesderger, J., Ladbury, G. A.F., Hoyle, D. V., Holland, P., Crump, J. A., Cleaveland, S., Rubach, M. P. (2020) Zoonotic causes of febrile illness in malaria endemic countries: a systematic review. Lancet Infectious Diseases, 20, pp. e27-e37. (doi: 10.1016/S1473-3099(19)30629-2)

Weir, W., Gray, A., Shiels, B., Katzer, F. (2020) Babesia venatorum has not ‘just arrived’ in the UK. Veterinary Record, 186, pp. 96-97. (doi: 10.1136/vr.m219)

Bryden, S. R., Pingen, M., Lefteri, D. A., Miltenburg, J., Delang, L., Jacobs, S., Abdelnabi, R., Neyts, J., Pondeville, E., Major, J., Müller, M., Khalid, H., Tuplin, A., Varjak, M., Merits, A., Edgar, J., Graham, G. J., Shams, K., McKimmie, C. S. (2020) Pan-viral protection against arboviruses by activating skin macrophages at the inoculation site. Science Translational Medicine, 12, (doi: 10.1126/scitranslmed.aax2421)

Cabrero, P., Terhzaz, S., Dornan, A. J., Ghimire, S., Holmes, H. L., Turin, D. R., Romero, M. F., Davies, S., Dow, J. A.T. (2020) Specialized stellate cells offer a privileged route for rapid water flux in Drosophila renal tubule. Proceedings of the National Academy of Sciences of the United States of America, 117, pp. 1779-1787. (doi: 10.1073/pnas.1915943117)

Ortega-López, L. D., Pondeville, E., Kohl, A., León, R., Pazmino Betancourth, M., Almire, F., Torres-Valencia, S., Saldarriaga, S., Mirzai, N., Ferguson, H. M. (2020) The mosquito electrocuting trap as an exposure-free method for measuring human-biting rates by Aedes mosquito vectors. Parasites and Vectors, 13, (doi: 10.1186/s13071-020-3887-8)

Hughes, A., Lissenden, N., Viana, M., Toé, K. H., Ranson, H. (2020) Anopheles gambiae populations from Burkina Faso show minimal delayed mortality after exposure to insecticide-treated nets. Parasites and Vectors, 13, (doi: 10.1186/s13071-019-3872-2)

Bergner, L. M., Orton, R. J., Benavides, J. A., Becker, D. J., Tello, C., Biek, R., Streicker, D. G. (2020) Demographic and environmental drivers of metagenomic viral diversity in vampire bats. Molecular Ecology, 29, pp. 26-39. (doi: 10.1111/mec.15250)

Huffeldt, N. P., Mekel, F. R., Jenni-Eiermann, S., Goymann, W., Helm, B. (2020) Melatonin and corticosterone profiles under polar day in a seabird with sexually opposite activity-rhythms. General and Comparative Endocrinology, 285, (doi: 10.1016/j.ygcen.2019.113296)

Silva, S. J. R. d., Germano Mendes, R. P., Alves da Silva, C. T., Lorusso, A., Kohl, A., Pena, L. (2020) Insights into SARS-CoV-2, the coronavirus underlying COVID-19: recent genomic data and the development of reverse genetics systems. Journal of General Virology, 101, pp. 1021-1024. (doi: 10.1099/jgv.0.001458)

Jonsson, N.N., Ferguson, H.J., Koh-Tan, H.H.C., McCartney, C.A., Cernat, R.C., Strachan, E.M., Thomson, W., Snelling, T.J., Harvey, C.D., Andonovic, I., Michie, C., Wallace, R.J. (2019) Postmortem observations on rumen wall histology and gene expression and ruminal and caecal content of beef cattle fattened on barley-based rations. Animal, 14, pp. 1447-1460. (doi: 10.1017/S1751731119002878)

Nickbakhsh, S., Mair, C., Matthews, L., Reeve, R., Johnson, P.C.D., Thorburn, F., Von Wissmann, B., Reynolds, A., McMenamin, J., Gunson, R.N., Murcia, P.R. (2019) Virus-virus interactions impact the population dynamics of influenza and the common cold. Proceedings of the National Academy of Sciences of the United States of America, 116, pp. 27142-27150. (doi: 10.1073/pnas.1911083116)

Crispell, J., Benton, C. H., Balaz, D., De Maio, N., Ahkmetova, A., Allen, A., Biek, R., Presho, E. L., Dale, J., Hewinson, G., Lycett, S. J., Nunez-Garcia, J., Skuce, R. A., Trewby, H., Wilson, D. J., Zadoks, R. N., Delahay, R. J., Kao, R. R. (2019) Combining genomics and epidemiology to analyse bi-directional transmission of Mycobacterium bovis in a multi-host system. eLife, 8, (doi: 10.7554/elife.45833)

Antonopoulos, A., Busin, V., Laing, R., Devaney, E. (2019) Levamisole Resistance Markers in Haemonchus Contortus.

Sanou, A., Guelbéogo, W. M., Nelli, L., Toé, K. H., Zongo, S., Ouédraogo, P., Cissé, F., Mirzai, N., Matthiopoulos, J., Sagnon, N.’f., Ferguson, H. M. (2019) Evaluation of mosquito electrocuting traps as a safe alternative to the human landing catch for measuring human exposure to malaria vectors in Burkina Faso. Malaria Journal, 18, (doi: 10.1186/s12936-019-3030-5)

Turnbull, F., Devaney, E., Morrison, A. A., Laing, R., Bartley, D. J. (2019) Genotypic characterisation of monepantel resistance in historical and newly derived field strains of Teladorsagia circumcincta. International Journal for Parasitology: Drugs and Drug Resistance, 11, pp. 59-69. (doi: 10.1016/j.ijpddr.2019.10.002)

Gray, A., Capewell, P., Loney, C., Katzer, F., Shiels, B. R., Weir, W. (2019) Sheep as host species for zoonotic Babesia venatorum, United Kingdom. Emerging Infectious Diseases, 25, pp. 2257-2260. (doi: 10.3201/eid2512.190459)

Ribeiro, R., Eze, J. I., Gilbert, L., Wint, G. R. W., Gunn, G., Macrae, A., Medlock, J. M., Auty, H. (2019) Using imperfect data in predictive mapping of vectors: a regional example of Ixodes ricinus distribution. Parasites and Vectors, 12, (doi: 10.1186/s13071-019-3784-1)

Buckley, J., Daly, R., Cobbold, C. A., Burgess, K., Mable, B. K. (2019) Changing environments and genetic variation: natural variation in inbreeding does not compromise short-term physiological responses. Proceedings of the Royal Society of London Series B: Biological Sciences, 286, (doi: 10.1098/rspb.2019.2109)

Khan, A., Fujita, A. W., Randle, N., Regidor-Cerrillo, J., Shaik, J. S., Shen, K., Oler, A. J., Quinones, M., Latham, S. M., Akanmori, B. D., Cleaveland, S., Innes, E. A., Ryan, U., Šlapeta, J., Schares, G., Ortega-Mora, L. M., Dubey, J. P., Wastling, J. M., Grigg, M. E. (2019) Global selective sweep of a highly inbred genome of the cattle parasite. Proceedings of the National Academy of Sciences of the United States of America, 116, pp. 22764-22773. (doi: 10.1073/pnas.1913531116)

Auty, H., Mellor, D., Gunn, G., Boden, L. A. (2019) The risk of foot and mouth disease transmission posed by public access to the countryside during an outbreak. Frontiers in Veterinary Science, 6, (doi: 10.3389/fvets.2019.00381)

Helm, B., Van Doren, B. M., Hoffmann, D., Hoffmann, U. (2019) Evolutionary response to climate change in migratory pied flycatchers. Current Biology, 29, pp. 3714-3719.e4. (doi: 10.1016/j.cub.2019.08.072)

Quintana, J. F., Kumar, S., Ivens, A., Chow, F. W. N., Hoy, A. M., Fulton, A., Dickinson, P., Martin, C., Taylor, M., Babayan, S. A., Buck, A. H. (2019) Comparative analysis of small RNAs released by the filarial nematode Litomosoides sigmodontis in vitro and in vivo. PLoS Neglected Tropical Diseases, 13, (doi: 10.1371/journal.pntd.0007811)

Busin, V., Viora, L., King, G., Tomlinson, M., Le Kernec, J., Jonsson, N., Fioranelli, F. (2019) Evaluation of lameness detection using radar sensing in ruminants. Veterinary Record, 185, (doi: 10.1136/vr.105407)

Larcombe, S.D., Kolte, S.W., Ponnudurai, G., Kurkure, N., Magar, S., Velusamy, R., Rani, N., Rubinibala, B., Rekha, B., Alagesan, A., Weir, W., Shiels, B.R. (2019) The impact of tick-borne pathogen infection in Indian bovines is determined by host type but not the genotype of Theileria annulata. Infection, Genetics and Evolution, 75, (doi: 10.1016/j.meegid.2019.103972)

Rynkiewicz, E. C., Clerc, M., Babayan, S. A., Pedersen, A. B. (2019) Variation in local and systemic pro-inflammatory immune markers of wild wood mice after anthelminthic treatment. Integrative and Comparative Biology, 59, pp. 1190-1202. (doi: 10.1093/icb/icz136)

Fornace, K. M., Alexander, N., Abidin, T. R., Brock, P. M., Chua, T. H., Vythilingam, I., Ferguson, H. M., Manin, B. O., Wong, M. L., Ng, S. H., Cox, J., Drakeley, C. (2019) Local human movement patterns and land use impact exposure to zoonotic malaria in Malaysian Borneo. eLife, 8, (doi: 10.7554/elife.47602)

Rezansoff, A. M., Laing, R., Martinelli, A., Stasiuk, S., Redman, E., Bartley, D., Holroyd, N., Devaney, E., Sargison, N. D., Doyle, S., Cotton, J. A., Gilleard, J. S. (2019) The confounding effects of high genetic diversity on the determination and interpretation of differential gene expression analysis in the parasitic nematode Haemonchus contortus. International Journal for Parasitology, 49, pp. 847-858. (doi: 10.1016/j.ijpara.2019.05.012)

Theonest, N. O., Carter, R. W., Amani, N., Doherty, S. L., Hugho, E., Keyyu, J. D., Mable, B. K., Shirima, G. M., Tarimo, R., Thomas, K. M., Haydon, D. T., Buza, J. J., Allan, K. J., Halliday, J. E.B. (2019) Molecular detection and genetic characterization of Bartonella species from rodents and their associated ectoparasites from northern Tanzania. PLoS ONE, 14, (doi: 10.1371/journal.pone.0223667)

Mwanga, E. P., Minja, E. G., Mrimi, E., González Jiménez, M., Swai, J. K., Abbasi, S., Ngowo, H. S., Siria, D. J., Mapua, S., Stica, C., Maia, M. F., Olotu, A., Sikulu-Lord, M. T., Baldini, F., Ferguson, H. M., Wynne, K., Selvaraj, P., Babayan, S. A., Okumu, F. O. (2019) Detection of malaria parasites in dried human blood spots using mid-infrared spectroscopy and logistic regression analysis. Malaria Journal, 18, (doi: 10.1186/s12936-019-2982-9)

Changalucha, J., Steenson, R., Grieve, E., Cleaveland, S., Lembo, T., Lushasi, K., Mchau, G., Mtema, Z., Sambo, M., Nanai, A., Govella, N. J., Dilip, A., Sikana, L., Ventura, F., Hampson, K. (2019) The need to improve access to rabies post-exposure vaccines: lessons from Tanzania. Vaccine, 37, pp. A45-A53. (doi: 10.1016/j.vaccine.2018.08.086)

Ghimire, S., Terhzaz, S., Cabrero, P., Romero, M. F., Davies, S., Dow, J. A.T. (2019) Targeted renal knockdown of Na+/H+ exchanger regulatory factor Sip1 produces uric acid nephrolithiasis in Drosophila. American Journal of Physiology: Renal Physiology, 317, pp. F930-F940. (doi: 10.1152/ajprenal.00551.2018)

Ciosi, M., Maxwell, A., Cumming, S. A., Hensman Moss, D. J., Alshammari, A. M., Flower, M. D., Durr, A., Leavitt, B. R., Roos, R. A.C., Holmans, P., Jones, L., Langbehn, D. R., Kwak, S., Tabrizi, S. J., Monckton, D. G. (2019) A genetic association study of glutamine-encoding DNA sequence structures, somatic CAG expansion, and DNA repair gene variants, with Huntington disease clinical outcomes. EBioMedicine, 48, pp. 568-580. (doi: 10.1016/j.ebiom.2019.09.020)

Tykalová, H., Selinger, M., Štěrba, J., Vavrušková, Z., Věchtová, P., Lieskovská, J., Kohl, A., Schnettler, E., Grubhoffer, L. (2019) Tick-borne encephalitis virus inhibits rRNA synthesis and host protein production in human cells of neural origin. PLoS Neglected Tropical Diseases, 13, (doi: 10.1371/journal.pntd.0007745)

Semango, G., Hamilton, C. M., Kreppel, K., Katzer, F., Kibona, T., Lankester, F., Allan, K. J., Thomas, K. M., Claxton, J. R., Innes, E. A., Swai, E. S., Buza, J., Cleaveland, S., de Glanville, W. A. (2019) The sero-epidemiology of Neospora caninum in cattle in northern Tanzania. Frontiers in Veterinary Science, 6, (doi: 10.3389/fvets.2019.00327)

Sanou, A., Guelbéogo, W. M., Nelli, L., Toé, K. H., Zongo, S., Ouédraogo, P., Cissé, F., Sagnon, N., Matthiopoulos, J., Ferguson, H.M. (2019) Biting and Resting Behaviours of Malaria Vectors in Rural Burkina Faso Following Scaling up of LLINs.

Doyle, S. R. et al. (2019) Evaluation of DNA extraction methods on individual helminth egg and larval stages for whole-genome sequencing. Frontiers in Genetics, 10, (doi: 10.3389/fgene.2019.00826)

González Jiménez, M., Babayan, S. A., Khazaeli, P., Doyle, M., Walton, F., Reddy, E., Glew, T., Viana, M., Ranford-Cartwright, L., Niang, A., Siria, D. J., Okumu, F. O., Diabaté, A., Ferguson, H. M., Baldini, F., Wynne, K. (2019) Prediction of mosquito species and population age structure using mid-infrared spectroscopy and supervised machine learning. Wellcome Open Research, 4, (doi: 10.12688/wellcomeopenres.15201.3)

Modha, S., Hughes, J., Bianco, G., Ferguson, H. M., Helm, B., Tong, L., Wilkie, G. S., Kohl, A., Schnettler, E. (2019) Metaviromics reveals unknown viral diversity in the biting midge Culicoides impunctatus. Viruses, 11, (doi: 10.3390/v11090865)

Pradhan, S., Kalia, I., Roy, S. S., Singh, O. P., Adak, T., Singh, A. P., Dhar, S. K. (2019) Molecular characterization and expression profile of an alternate proliferating cell nuclear antigen homolog PbPCNA2 in Plasmodium berghei. IUBMB Life, 71, pp. 1293-1301. (doi: 10.1002/iub.2036)

Thomson, S., Innes, E. A., Jonsson, N. N., Katzer, F. (2019) Shedding of Cryptosporidium in calves and dams – evidence of re-infection and shedding of different gp60 subtypes. Parasitology, 146, pp. 1404-1413. (doi: 10.1017/S0031182019000829)

Kendall, C., Khalid, H., Müller, M., Banda, D. H., Kohl, A., Merits, A., Stonehouse, N. J., Tuplin, A. (2019) Structural and phenotypic analysis of Chikungunya virus RNA replication elements. Nucleic Acids Research, 47, pp. 9396-9312. (doi: 10.1093/nar/gkz640)

Miller, J. A.O., Furness, R. W., Trinder, M., Matthiopoulos, J. (2019) The sensitivity of seabird populations to density-dependence, environmental stochasticity and anthropogenic mortality. Journal of Applied Ecology, 56, pp. 2118-2130. (doi: 10.1111/1365-2664.13448)

Caillat, M., Cordes, L., Thompson, P., Matthiopoulos, J., Smout, S. (2019) Use of state‐space modelling to identify ecological covariates associated with trends in pinniped demography. Aquatic Conservation: Marine and Freshwater Ecosystems, 29, pp. 101-118. (doi: 10.1002/aqc.3130)

Howick, V. M., Russell, A. J.C., Andrews, T., Heaton, H., Reid, A. J., Natarajan, K., Butungi, H., Metcalf, T., Verzier, L. H., Rayner, J. C., Berriman, M., Herren, J. K., Billker, O., Hemberg, M., Talman, A. M., Lawniczak, M. K.N. (2019) The Malaria Cell Atlas: single parasite transcriptomes across the complete Plasmodium life cycle. Science, 365, (doi: 10.1126/science.aaw2619)

Lima, M. C., Mendonça, L. R. d., Rezende, A. M., Carrera, R. M., Aníbal-Silva, C. E., Demers, M., D'Aiuto, L., Wood, J., Chowdari, K. V., Griffiths, M., Lucena-Araujo, A. R., Barral-Netto, M., Azevedo, E. A. N., Alves, R. W., Farias, P. C. S., Marques, E. T. A., Castanha, P. M. S., Donald, C. L., Kohl, A., Nimgaonkar, V. L., Franca, R. F. O. (2019) The transcriptional and protein profile from human infected neuroprogenitor cells is strongly correlated to Zika virus microcephaly cytokines phenotype evidencing a persistent inflammation in the CNS. Frontiers in Immunology, 10, (doi: 10.3389/fimmu.2019.01928)

Kamoto, K., Noyes, H., Nambala, P., Senga, E., Musaya-Mwalija, J., Kumwenda, B., Bucheton, B., Macleod, A., Herz-Fowler, C., Matovu, E., Chiwaya, A. M., Chisi, J. E. (2019) Association of APOL1 renal disease risk alleles with Trypanosoma brucei rhodesiense infection outcomes in the northern part of Malawi. PLoS Neglected Tropical Diseases, 13, (doi: 10.1371/journal.pntd.0007603)

Lee, J.-M. et al. (2019) CAG repeat not polyglutamine length determines timing of Huntington’s disease onset. Cell, 178, pp. 887-900.e14. (doi: 10.1016/j.cell.2019.06.036)

Sarker, S. K., Matthiopoulos, J., Mitchell, S. N., Ahmed, Z. U., Al Mamun, M. B., Reeve, R. (2019) 1980s–2010s: the world’s largest mangrove ecosystem is becoming homogenous. Biological Conservation, 236, pp. 79-91. (doi: 10.1016/j.biocon.2019.05.011)

Hodgkinson, J. E. et al. (2019) Refugia and anthelmintic resistance: concepts and challenges. International Journal for Parasitology, 10, pp. 51-57. (doi: 10.1016/j.ijpddr.2019.05.001)

Ayers, V. B., Huang, Y.-J. S., Lyons, A. C., Park, S. L., Dunlop, J. I., Unlu, I., Kohl, A., Higgs, S., Blitvich, B. J., Vanlandingham, D. L. (2019) Infection and transmission of Cache Valley virus by Aedes albopictus and Aedes aegypti mosquitoes. Parasites and Vectors, 12, (doi: 10.1186/s13071-019-3643-0)

Fioranelli, F., Li, H., Le Kernec, J., Busin, V., Jonsson, N., King, G., Tomlinson, M., Viora, L. (2019) Radar-based Evaluation of Lameness Detection in Ruminants: Preliminary Results. (doi: 10.1109/IMBIOC.2019.8777830)

Herzog, C.M., de Glanville, W.A., Willett, B.J., Kibona, T.J., Cattadori, I.M., Kapur, V., Hudson, P.J., Buza, J., Cleaveland, S., Bjørnstad, O.N. (2019) Pastoral production is associated with increased peste des petits ruminants seroprevalence in northern Tanzania across sheep, goats and cattle. Epidemiology and Infection, 147, (doi: 10.1017/S0950268819001262)

Hrynick, T.A., Barasa, V., Benschop, J., Cleaveland, S., Crump, J.A., Davis, M., Mariki, B., Mmbaga, B.T., Mtui-Malamsha, N., Prinsen, G., Sharp, J., Sindiyo, E., Swai, E.S., Thomas, K.M., Zadoks, R., Waldman, L. (2019) Street-level diplomacy and local enforcement for meat safety in northern Tanzania: knowledge, pragmatism and trust. BMC Public Health, 19, (doi: 10.1186/s12889-019-7067-8)

Overend, G., Légaré, C., Mathieu, J., Bouchard, L., Gagnon, C., Monckton, D. G. (2019) Allele length of the DMPK CTG repeat is a predictor of progressive myotonic dystrophy type 1 phenotypes. Human Molecular Genetics, 28, pp. 2245-2254. (doi: 10.1093/hmg/ddz055)

Kilarski, W. W., Martin, C., Pisano, M., Bain, O., Babayan, S. A., Swartz, M. A. (2019) Inherent biomechanical traits enable infective filariae to disseminate through collecting lymphatic vessels. Nature Communications, 10, (doi: 10.1038/s41467-019-10675-2)

Calatayud, O., Esperón, F., Cleaveland, S., Biek, R., Keyyu, J., Eblate, E., Neves, E., Lembo, T., Lankester, F. (2019) Carnivore parvovirus ecology in the Serengeti ecosystem: vaccine strains circulating and new host species identified. Journal of Virology, 93, (doi: 10.1128/JVI.02220-18)

Jacquot, M., Rao, P. P., Yadav, S., Nomikou, K., Maan, S., Jyothi, Y. K., Reddy, N., Hemadri, D., Singh, K. P., Maan, N. S., Hegde, N. R., Mertens, P., Biek, R. (2019) Contrasting selective patterns across the segmented genome of bluetongue virus in a global reassortment hotspot. Virus Evolution, 5, (doi: 10.1093/ve/vez027)

Kreppel, K., Caminade, C., Govella, N., Morse, A. P., Ferguson, H. M., Baylis, M. (2019) Impact of ENSO 2016-17 on regional climate and malaria vector dynamics in Tanzania. Environmental Research Letters, 14, (doi: 10.1088/1748-9326/ab26c7)

Flower, M., Lomeikaite, V., Ciosi, M., Cumming, S., Morales, F., Lo, K., Hensman Moss, D., Jones, L., Holmans, P., Monckton, D. G., Tabrizi, S. J. (2019) MSH3 modifies somatic instability and disease severity in Huntington's and myotonic dystrophy type 1. Brain, 142, pp. 1876-1886. (doi: 10.1093/brain/awz115)

Kaboré, J. W., Camara, O., Ilboudo, H., Capewell, P., Clucas, C., Cooper, A., Kaboré, J., Camara, M., Jamonneau, V., Hertz-Fowler, C., Bélem, A. M. G., Matovu, E., Macleod, A., Sidibé, I., Noyes, H., Bucheton, B. (2019) Macrophage migrating inhibitory factor expression is associated with Trypanosoma brucei gambiense infection and is controlled by trans-acting expression quantitative trait loci in the Guinean population. Infection, Genetics and Evolution, 71, pp. 108-115. (doi: 10.1016/j.meegid.2019.03.021)

Baker, L., Matthiopoulos, J., Müller, T., Freuling, C., Hampson, K. (2019) Optimising spatial and seasonal deployment of vaccination campaigns to eliminate wildlife rabies. Philosophical Transactions of the Royal Society B: Biological Sciences, 374, (doi: 10.1098/rstb.2018.0280)

Clerc, M., Fenton, A., Babayan, S. A., Pedersen, A. B. (2019) Parasitic nematodes simultaneously suppress and benefit from coccidian coinfection in their natural mouse host. Parasitology, 146, pp. 1096-1106. (doi: 10.1017/S0031182019000192)

Busin, V., Viora, L., King, G., Tomlinson, M., Le Kernec, J., Jonsson, N. N., Fioranelli, F. (2019) Radar Sensing as a Novel Tool to Detect Lameness in Sheep.

Alford, L., Marley, R., Dornan, A., Dow, J. A.T., Nachman, R. J., Davies, S. A. (2019) Desiccation, thermal stress and associated mortality in Drosophila fruit flies induced by neuropeptide analogue treatment. Journal of Pest Science, 92, pp. 1123-1137. (doi: 10.1007/s10340-019-01100-0)

Yen, P.-S., Chen, C.-H., Sreenu, V., Kohl, A., Failloux, A.-B. (2019) Assessing the potential interactions between cellular miRNA and arboviral genomic RNA in the Yellow Fever mosquito, Aedes aegypti. Viruses, 11, (doi: 10.3390/v11060540)

Alford, L., Marley, R., Dornan, A., Pierre, J.-S., Dow, J. A.T., Nachman, R. J., Davies, S. A. (2019) Assessment of neuropeptide binding sites and the impact of biostable kinin and CAP2b analogue treatment on aphid (Myzus persicae and Macrosiphum rosae) stress tolerance. Pest Management Science, 75, pp. 1750-1759. (doi: 10.1002/ps.5372)

Purisotayo, T., Jonsson, N. N., Mable, B. K., Verreyenne, F. J. (2019) Combining molecular and incomplete observational data to inform management of southern white rhinoceros (Ceratotherium simum simum) Conservation Genetics, 20, pp. 639-652. (doi: 10.1007/s10592-019-01166-4)

Ahmed, H., Yoder, J., de Glanville, W. A., Davis, A., Kibona, T. J., Mmbaga, B. T., Lankester, F., Swai, E. S., Cleaveland, S. (2019) Economic burden of livestock disease and drought in Northern Tanzania. Journal of Development and Agricultural Economics, 11, pp. 140-151. (doi: 10.5897/JDAE2018.1028)

Pezzi, L. et al. (2019) GloPID-R report on Chikungunya, O'nyong-nyong and Mayaro virus, part I: biological diagnostics. Antiviral Research, 166, pp. 66-81. (doi: 10.1016/j.antiviral.2019.03.009)

Légaré, C., Overend, G., Guay, S.-P., Monckton, D. G., Mathieu, J., Gagnon, C., Bouchard, L. (2019) gene DNA methylation levels are associated with muscular and respiratory profiles in DM1. Neurology Genetics, 5, (doi: 10.1212/NXG.0000000000000338)

Mwanga, E. P., Mapua, S. A., Siria, D. J., Ngowo, H. S., Nangacha, F., Mgando, J., Baldini, F., González Jiménez, M., Ferguson, H. M., Wynne, K., Selvaraj, P., Babayan, S. A., Okumu, F. O. (2019) Using mid-infrared spectroscopy and supervised machine-learning to identify vertebrate blood meals in the malaria vector, Anopheles arabiensis. Malaria Journal, 18, (doi: 10.1186/s12936-019-2822-y)

Chaters, G.L., Johnson, P.C.D., Cleaveland, S., Crispell, J., de Glanville, W.A., Doherty, T., Matthews, L., Mohr, S., Nyasebwa, O.M., Rossi, G., Salvador, L.C.M., Swai, E., Kao, R.R. (2019) Analysing livestock network data for infectious disease control: an argument for routine data collection in emerging economies. Philosophical Transactions of the Royal Society B: Biological Sciences, 374, (doi: 10.1098/rstb.2018.0264)

Traore, A., Badolo, A., Guelbeogo, M. W., Sanou, A., Viana, M., Nelli, L., Zongo, S., Kobie, H. K., Traoré, A. S., Ranson, H., Sagnon, N.'f. (2019) Anopheline species composition and the 1014F-genotype in different ecological settings of Burkina Faso in relation to malaria transmission. Malaria Journal, 18, (doi: 10.1186/s12936-019-2789-8)

Sarker, S. K., Reeve, R., Paul, N. K., Matthiopoulos, J. (2019) Modelling spatial biodiversity in the world’s largest mangrove ecosystem-The Bangladesh Sundarbans: a baseline for conservation. Diversity and Distributions, 25, pp. 729-742. (doi: 10.1111/ddi.12887)

Martinez Corrales, G., Cabrero, P., Dow, J. A.T., Terhzaz, S., Davies, S. (2019) Novel roles for GATAe in growth, maintenance and proliferation of cell populations in the Drosophila renal tubule. Development, 146, (doi: 10.1242/dev.178087)

Lee, K. M., Wilson, G. J., Pingen, M., Fukuoka, A., Hansell, C. A.H., Bartolini, R., Medina-Ruiz, L., Graham, G. J. (2019) Placental chemokine compartmentalisation: a novel mammalian molecular control mechanism. PLoS Biology, 17, (doi: 10.1371/journal.pbio.3000287)

Grillet, M. E. et al. (2019) Venezuela's humanitarian crisis, resurgence of vector-borne diseases, and implications for spillover in the region. Lancet Infectious Diseases, 19, pp. e149-e161. (doi: 10.1016/S1473-3099(18)30757-6)

Matthiopoulos, J., Field, C., MacLeod, R. (2019) Predicting population change from models based on habitat availability and utilization. Proceedings of the Royal Society of London Series B: Biological Sciences, 286, (doi: 10.1098/rspb.2018.2911)

Clerc, M., Babayan, S. A., Fenton, A., Pedersen, A. B. (2019) Age affects antibody levels and anthelmintic treatment efficacy in a wild rodent. International Journal for Parasitology: Parasites and Wildlife, 8, pp. 240-247. (doi: 10.1016/j.ijppaw.2019.03.004)

Horswill, C., Kindsvater, H.K., Juan-Jordá, M.J., Dulvy, N.K., Mangel, M., Matthiopoulos, J. (2019) Global reconstruction of life-history strategies: a case study using tunas. Journal of Applied Ecology, 56, pp. 855-865. (doi: 10.1111/1365-2664.13327)

Ofon, E., Noyes, H., Ebo’o Eyanga, V., Njiokou, F., Koffi, M., Fogue, P., Hertz-Fowler, C., MacLeod, A., Matovu, E., Simo, G. (2019) Association between IL1 gene polymorphism and human African trypanosomiasis in populations of sleeping sickness foci of southern Cameroon. PLoS Neglected Tropical Diseases, 13, (doi: 10.1371/journal.pntd.0007283)

Maia, M. F., Kapulu, M., Muthui, M., Wagah, M. G., Ferguson, H. M., Dowell, F. E., Baldini, F., Ranford-Cartwright, L. (2019) Detection of Plasmodium falciparum infected Anopheles gambiae using near-infrared spectroscopy. Malaria Journal, 18, (doi: 10.1186/s12936-019-2719-9)

Meza, F. C., Kreppel, K. S., Maliti, D. F., Mlwale, A. T., Mirzai, N., Killeen, G. F., Ferguson, H. M., Govella, N. J. (2019) Mosquito electrocuting traps for directly measuring biting rates and host-preferences of Anopheles arabiensis and Anopheles funestus outdoors. Malaria Journal, 18, (doi: 10.1186/s12936-019-2726-x)

Pondeville, E., Puchot, N., Lang, M., Cherrier, F., Schaffner, F., Dauphin-Villemant, C., Bischoff, E., Bourgouin, C. (2019) Evolution of sexually-transferred steroids and mating-induced phenotypes in Anopheles mosquitoes. Scientific Reports, 9, (doi: 10.1038/s41598-019-41094-4)

Doyle, S. R., Illingworth, C. J.R., Laing, R., Bartley, D. J., Redman, E., Martinelli, A., Holroyd, N., Morrison, A. A., Rezansoff, A., Tracey, A., Devaney, E., Berriman, M., Sargison, N., Cotton, J. A., Gilleard, J. S. (2019) Population genomic and evolutionary modelling analyses reveal a single major QTL for ivermectin drug resistance in the pathogenic nematode, Haemonchus contortus. BMC Genomics, 20, pp. 218. (doi: 10.1186/s12864-019-5592-6)

Gilbert, G., MacGillivray, i. S., Robertson, H. L., Jonsson, N. N. (2019) Adverse effects of routine bovine health treatments containing triclabendazole and synthetic pyrethroids on the abundance of dipteran larvae in bovine faeces. Scientific Reports, 9, (doi: 10.1038/s41598-019-40800-6)

Hamilton, A. W., Davison, C., Tachtatzis, C., Andonovic, I., Michie, C., Ferguson, H. J., Somerville, L., Jonsson, N. N. (2019) Identification of the rumination in cattle using support vector machines with motion-sensitive bolus sensors. Sensors, 19, (doi: 10.3390/s19051165)

Riotte-Lambert, L., Matthiopoulos, J. (2019) Communal and efficient movement routines can develop spontaneously through public information use. Behavioral Ecology, 30, pp. 408-416. (doi: 10.1093/beheco/ary180)

Kerfua, S. D., Shirima, G., Kusiluka, L., Ayebazibwe, C., Martin, E., Arinaitwe, E., Cleaveland, S., Haydon, D. T. (2019) Low topotype diversity of recent foot-and-mouth disease virus serotypes O and A from districts located along the Uganda and Tanzania border. Journal of Veterinary Science, 20, (doi: 10.4142/jvs.2019.20.e4)

Rezelj, V. V., Mottram, T. J., Hughes, J., Elliott, R. M., Kohl, A., Brennan, B. (2019) M segment-based minigenomes and virus-like particle assays as an approach to assess the potential of tick-borne Phlebovirus genome reassortment. Journal of Virology, 93, (doi: 10.1128/JVI.02068-18)

Behdenna, A., Lembo, T., Calatayud Martinez, O., Cleaveland, S., Halliday, J. E.B., Packer, C., Lankester, F., Hampson, K., Craft, M. E., Czupryna, A., Dobson, A. P., Dubovi, E. J., Eblate, E., Fyumagwa, R., Hopcraft, J. G. C., Mentzel, C., Mzimbiri, I., Sutton, D., Willett, B., Haydon, D. T., Viana, M. (2019) Transmission ecology of canine parvovirus in a multi-host, multi-pathogen system. Proceedings of the Royal Society of London Series B: Biological Sciences, 286, (doi: 10.1098/rspb.2018.2772)

Page, A. P., Roberts, M., Felix, M.-A., Pickard, D., Page, A., Weir, W. (2019) The golden death bacillus Chryseobacterium nematophagum is a novel matrix digesting pathogen of nematodes. BMC Biology, 17, (doi: 10.1186/s12915-019-0632-x)

Chiweshe, S. M., Steketee, P. C., Jayaraman, S., Paxton, E., Neophytou, K., Erasmus, H., Labuschagne, M., Cooper, A., MacLeod, A., Grey, F. E., Morrison, L. J. (2019) Parasite specific 7SL-derived small RNA is an effective target for diagnosis of active trypanosomiasis infection. PLoS Neglected Tropical Diseases, 13, (doi: 10.1371/journal.pntd.0007189)

Bitek, A. O., Osoro, E., Munyua, P. M., Nanyingi, M., Muthiani, Y., Kiambi, S., Muturi, M., Mwatondo, A., Muriithi, R., Cleaveland, S., Hampson, K., Njenga, M. K., Kitala, P.M., Thumbi, S. M. (2019) A hundred years of rabies in Kenya and the strategy for eliminating dog-mediated rabies by 2030. AAS Open Research, 1, (doi: 10.12688/aasopenres.12872.2)

Putman, R., Nelli, L., Matthiopoulos, J. (2019) Changes in bodyweight and productivity in resource-restricted populations of red deer (Cervus elaphus) in response to deliberate reductions in density. European Journal of Wildlife Research, 65, (doi: 10.1007/s10344-018-1251-5)

Landry, G. M., Furrow, E., Holmes, H. L., Hirata, T., Kato, A., Williams, P., Strohmaier, K., Gallo, C. J. R., Chang, M., Pandey, M. K., Jiang, H., Bansal, A., Franz, M.-C., Montalbetti, N., Alexander, M. P., Cabrero, P., Dow, J. A.T., DeGrado, T. R., Romero, M. F. (2019) Cloning, function, and localization of human, canine, and Drosophila ZIP10 (SLC39A10), a Zn2+ transporter. American Journal of Physiology: Renal Physiology, 316, pp. F263-F273. (doi: 10.1152/ajprenal.00573.2017)

Mable, B. K. (2019) Conservation of adaptive potential and functional diversity: integrating old and new approaches. Conservation Genetics, 20, pp. 89-100. (doi: 10.1007/s10592-018-1129-9)

Hughes, E. C., Kibona, T. K., de Glanville, W. A., Lankester, F., Davis, A., Carter, R. W., de Jong, R. M.F., Nyasebwa, O. M., Claxton, J. R., Cleaveland, S., Allan, K. J. (2019) Taenia multiceps coenurosis in Tanzania: a major and under-recognised livestock disease problem in pastoral communities. Veterinary Record, 184, (doi: 10.1136/vr.105186)

Zhuang, X. et al. (2019) The circadian clock components BMAL1 and REV-ERBα regulate flavivirus replication. Nature Communications, 10, (doi: 10.1038/s41467-019-08299-7)

Capewell, P., Atkins, K., Weir, W., Jamonneau, V., Camara, M., Clucas, C., Swar, N.-R. K., Ngoyi, D. M., Rotureau, B., Garside, P., Galvani, A. P., Bucheton, B., MacLeod, A. (2019) Resolving the apparent transmission paradox of African sleeping sickness. PLoS Biology, 17, (doi: 10.1371/journal.pbio.3000105)

Brock, P. M., Fornace, K. M., Grigg, M. J., Anstey, N. M., William, T., Cox, J., Drakeley, C. J., Ferguson, H. M., Kao, R. R. (2019) Predictive analysis across spatial scales links zoonotic malaria to deforestation. Proceedings of the Royal Society of London Series B: Biological Sciences, 286, (doi: 10.1098/rspb.2018.2351)

Gillan, V., Simpson, D. M., Kinnaird, J., Maitland, K., Shiels, B., Devaney, E. (2019) Characterisation of infection associated microRNA and protein cargo in extracellular vesicles of Theileria annulata infected leukocytes. Cellular Microbiology, 21, (doi: 10.1111/cmi.12969)

International Helminth Genomes Consortium, et al. (2019) Comparative genomics of the major parasitic worms. Nature Genetics, 51, pp. 163-174. (doi: 10.1038/s41588-018-0262-1)

Apfelbeck, B., Haussmann, M. F., Boner, W., Flinks, H., Griffiths, K., Illera, J. C., Mortega, K. G., Sisson, Z., Smiddy, P., Helm, B. (2019) Divergent patterns of telomere shortening in tropical compared to temperate stonechats. Ecology and Evolution, 9, pp. 511-521. (doi: 10.1002/ece3.4769)

Coultous, R. M., Phipps, P., Dalley, C., Lewis, J., Hammond, T.-A., Shiels, B. R., Weir, W., Sutton, D. G.M. (2019) Equine piroplasmosis status in the UK: an assessment of laboratory diagnostic submissions and techniques. Veterinary Record, 184, (doi: 10.1136/vr.104855)

Jonsson, N. N., Kleen, J. L., Wallace, R. J., Andonovic, I., Michie, C., Farish, M., Mitchell, M., Duthie, C.-A., Jensen, D. B., Denwood, M. J. (2019) Evaluation of reticuloruminal pH measurements from individual cattle: sampling strategies for the assessment of herd status. Veterinary Journal, 243, pp. 26-32. (doi: 10.1016/j.tvjl.2018.11.006)

Bilgic, H. B., Aksulu, A., Bakırcı, S., Unlu, A. H., Kose, O., Hacılarlıoglu, S., Weir, W., Karagenc, T. (2019) Infection dynamics of Theileria annulata over a disease season following cell line vaccination. Veterinary Parasitology, 265, pp. 63-73. (doi: 10.1016/j.vetpar.2018.11.012)

Clark, T. J., Matthiopoulos, J., Bonnet-Lebrun, A.-S., Campioni, L., Catry, P., Marengo, I., Poncet, S., Wakefield, E. (2019) Integrating habitat and partial survey data to estimate the regional population of a globally declining seabird species, the sooty shearwater. Global Ecology and Conservation, 17, (doi: 10.1016/j.gecco.2019.e00554)

Michelot, T., Blackwell, P. G., Matthiopoulos, J. (2019) Linking resource selection and step selection models for habitat preferences in animals. Ecology, 100, (doi: 10.1002/ecy.2452)

Ventura, F., Matthiopoulos, J., Jeglinski, J. W.E. (2019) Minimal overlap between areas of high conservation priority for endangered Galapagos pinnipeds and the conservation zone of the Galapagos Marine Reserve. Aquatic Conservation: Marine and Freshwater Ecosystems, 29, pp. 115-126. (doi: 10.1002/aqc.2943)

Bergner, L. M., Orton, R. J., da Silva Filipe, A., Shaw, A. E., Becker, D. J., Tello, C., Biek, R., Streicker, D. G. (2019) Using noninvasive metagenomics to characterize viral communities from wildlife. Molecular Ecology Resources, 19, pp. 128-143. (doi: 10.1111/1755-0998.12946)

Dow, J. A.T., Halberg, K. A., Terhzaz, S., Davies, S. A. (2019) Drosophila as a model for neuroendocrine control of renal homeostasis. Wiley

Davies, S.-A., Cabrero, P., Marley, R., Martinez-Corrales, G., Ghimire, S., Dornan, A. J., Dow, J. A.T. (2019) Epithelial function in the Drosophila Malpighian tubule: an in vivo renal model. Humana Press

Marks, N. D., Winter, A. D., Gu, H. Y., Maitland, K., Gillan, V., Ambroz, M., Martinelli, A., Laing, R., MacLellan, R., Towne, J., Roberts, B., Hanks, E., Devaney, E., Britton, C. (2019) Profiling microRNAs through development of the parasitic nematode Haemonchus identifies nematode-specific miRNAs that suppress larval development. Scientific Reports, 9, (doi: 10.1038/s41598-019-54154-6)

Baldini, F., Rougé, J., Kreppel, K., Mkandawile, G., Mapua, S. A., Sikulu-Lord, M., Ferguson, H., Govella, N., Okumu, F. O. (2018) First report of natural Wolbachia infection in the malaria mosquito Anopheles arabiensis in Tanzania. Parasites and Vectors, 11, (doi: 10.1186/s13071-018-3249-y)

Millins, C., Dickinson, E. R., Isakovic, P., Gilbert, L., Wojciechowska, A., Paterson, V., Tao, F., Jahn, M., Kilbride, E., Birtles, R., Johnson, P., Biek, R. (2018) Landscape structure affects the prevalence and distribution of a tick-borne zoonotic pathogen. Parasites and Vectors, 11, (doi: 10.1186/s13071-018-3200-2)

Donald, C. L., Varjak, M., Aguiar, E. R. G. R., Marques, J. T., Sreenu, V. B., Schnettler, E., Kohl, A. (2018) Antiviral RNA interference activity in cells of the predatory mosquito, Toxorhynchites amboinensis. Viruses, 10, (doi: 10.3390/v10120694)

Channumsin, M., Ciosi, M., Masiga, D., Turner, C. M. R., Mable, B. K. (2018) Sodalis glossinidius presence in wild tsetse is only associated with presence of trypanosomes in complex interactions with other tsetse-specific factors. BMC Microbiology, 18, (doi: 10.1186/s12866-018-1285-6)

Dunbar, D., Kwok, W., Graham, E., Armitage, A., Irvine, R., Johnston, P., McDonald, M., Montgomery, D., Nicolson, L., Robertson, E., Weir, W., Addie, D. D. (2018) Diagnosis of non-effusive feline infectious peritonitis by reverse transcriptase quantitative PCR from mesenteric lymph node fine-needle aspirates. Journal of Feline Medicine and Surgery, (doi: 10.1177/1098612X18809165)

Babayan, S. A., Orton, R. J., Streicker, D. G. (2018) Predicting reservoir hosts and arthropod vectors from evolutionary signatures in RNA virus genomes. Science, 362, pp. 577-580. (doi: 10.1126/science.aap9072)

Cumming, S. A., Hamilton, M. J., Robb, Y., Gregory, H., McWilliam, C., Cooper, A., Adam, B., McGhie, J., Hamilton, G., Herzyk, P., Tschannen, M. R., Worthey, E., Petty, R., Ballantyne, B., The Scottish Myotonic Dystrophy Consortium, , Warner, J., Farrugia, M. E., Longman, C., Monckton, D. G. (2018) De novo repeat interruptions are associated with reduced somatic instability and mild or absent clinical features in myotonic dystrophy type 1. European Journal of Human Genetics, 26, pp. 1635-1647. (doi: 10.1038/s41431-018-0156-9)

Nadin-Davis, S.A., Fu, Q., Trewby, H., Biek, R., Johnson, R.H., Real, L. (2018) Geography but not alternative host species explain the spread of raccoon rabies virus in Vermont. Epidemiology and Infection, 146, pp. 1977-1986. (doi: 10.1017/s0950268818001759)

Furness, R. W., Garthe, S., Trinder, M., Matthiopoulos, J., Wanless, S., Jeglinski, J. (2018) Nocturnal flight activity of northern gannets Morus bassanus and implications for modelling collision risk at offshore wind farms. Environmental Impact Assessment Review, 73, pp. 1-6. (doi: 10.1016/j.eiar.2018.06.006)

Hume, J. B., Recknagel, H., Bean, C. W.,, Adams, C. E., Mable, B. K. (2018) RADseq and mate choice assays reveal unidirectional gene flow among three lamprey ecotypes despite weak assortative mating: Insights into the formation and stability of multiple ecotypes in sympatry. Molecular Ecology, 27, pp. 4572-4590. (doi: 10.1111/mec.14881)

Dunlop, J. I., Szemiel, A. M., Navarro, A., Wilkie, G. S., Tong, L., Modha, S., Mair, D., Sreenu, V. B., Da Silva Filipe, A., Li, P., Huang, Y.-J. S., Brennan, B., Hughes, J., Vanlandingham, D. L., Higgs, S., Elliott, R. M., Kohl, A. (2018) Development of reverse genetics systems and investigation of host response antagonism and reassortment potential for Cache Valley and Kairi viruses, two emerging orthobunyaviruses of the Americas. PLoS Neglected Tropical Diseases, 12, (doi: 10.1371/journal.pntd.0006884)

Hansell, C. A.H., Fraser, A. R., Hayes, A. J., Pingen, M., Burt, C. L., Lee, K. M., Medina-Ruiz, L., Brownlie, D., Macleod, M. K.L., Burgoyne, P., Wilson, G. J., Nibbs, R. J.B., Graham, G. J. (2018) The atypical chemokine receptor Ackr2 constrains NK cell migratory activity and promotes metastasis. Journal of Immunology, 201, pp. 2510-2519. (doi: 10.4049/jimmunol.1800131)

Campos, T. D. L., Durães-Carvalho, R., Rezende, A. M., de Carvalho, O. V., Kohl, A., Wallau, G. L., Pena, L. J. (2018) Revisiting key entry routes of human epidemic arboviruses into the mainland Americas through large-scale phylogenomics. International Journal of Genomics, 2018, (doi: 10.1155/2018/6941735)

Masembe, C., Sreenu, V. B., Da Silva Filipe, A., Wilkie, G. S., Ogweng, P., Mayega, F. J., Muwanika, V. B., Biek, R., Palmarini, M., Davison, A. J. (2018) Genome sequences of five African swine fever virus genotype IX isolates from domestic pigs in Uganda. Microbiology Resource Announcements, 7, (doi: 10.1128/mra.01018-18)

Pandit, A. A., Ragionieri, L., Marley, R., Yeoh, J. G.C., Inward, D. J.G., Davies, S.-A., Predel, R., Dow, J. A.T. (2018) Coordinated RNA-Seq and peptidomics identify neuropeptides and G-protein coupled receptors (GPCRs) in the large pine weevil Hylobius abietis, a major forestry pest. Insect Biochemistry and Molecular Biology, 101, pp. 94-107. (doi: 10.1016/j.ibmb.2018.08.003)

Dominoni, D. M., de Jong, M., Bellingham, M., O'Shaughnessy, P., van Oers, K., Robinson, J., Smith, B., Visser, M. E., Helm, B. (2018) Dose-response effects of light at night on the reproductive physiology of great tits (Parus major): integrating morphological analyses with candidate gene expression. Journal of Experimental Zoology Part A: Ecological Genetics and Physiology, 329, pp. 473-487. (doi: 10.1002/jez.2214)

Guerrero, J., Byrne, A. W., Lavery, J., Presho, E., Kelly, G., Courcier, E. A., O'Keeffe, J., Fogarty, U., O'Meara, D. B., Ensing, D., McCormick, C., Biek, R., Skuce, R. A., Allen, A. R. (2018) The population and landscape genetics of the European badger (Meles meles) in Ireland. Ecology and Evolution, 8, pp. 10233-10246. (doi: 10.1002/ece3.4498)

Ayers, V. B., Huang, Y.-J., Lyons, A. C., Park, S. L., Higgs, S., Dunlop, J. I., Kohl, A., Alto, B. W., Unlu, I., Blitvich, B. J., Vanlandingham, D. L. (2018) Culex tarsalis is a competent vector species for Cache Valley virus. Parasites and Vectors, 11, (doi: 10.1186/s13071-018-3103-2)

Ng'habi, K., Viana, M., Matthiopoulos, J., Lyimo, I., Killeen, G., Ferguson, H. M. (2018) Mesocosm experiments reveal the impact of mosquito control measures on malaria vector life history and population dynamics. Scientific Reports, 8, (doi: 10.1038/s41598-018-31805-8)

Levesley, J., Baine, F., Ciosi, M., Maxwell, A., Monckton, D. G., Krause, A. (2018) A CIS-acting Modifier of Age at Diagnosis of Huntington Disease in Black South African Patients.

Ging, H., Nethisinghe, S., Chatzi, A., Ciosi, M., Monckton, D. G., Giunti, P. (2018) Determining the CAG Repeat Mosaic in Post-mortem Human HD Brains.

Flower, M., Lomeikaite, V., Ciosi, M., Morales, F., Lo, K., Hensman Moss, D., Jones, L., Holmans, P., Tabrizi, S. J., Monckton, D. G. (2018) Genetic Variation in MSH3 That Lowers Its Expression Ameliorates Disease Course and Limits Repeat Expansion in Huntington’s Disease and Myotonic Dystrophy Type 1.

Ciosi, M., Maxwell, A., Cumming, S., Hensman Moss, D. J., Alshammari, A. M., Flower, M. D., Durr, A., Leavitt, B. R., Roos, R. A., TRACK-HD team, , ENROLL-HD team, , Holmans, P., Jones, L., Langbehn, D. R., Kwak, S., Tabrizi, S. J., Monckton, D. G. (2018) Glutamine Codon Usage and Somatic Mosaicism of the HTT CAG Repeat Are Modifiers of Huntington Disease Severity.

Jonsson, N., Michie, C., Andonovic, M., Francesio, A., Viora, L., Davison, C., Tulley, W., Hamilton, A. (2018) Development and Application of Devices for the Continuous Monitoring of Reticuloruminal Motility.

Francesio, A., Viora, L., Tulley, W., Ferguson, H. J., Michie, C., Davison, C., Hamilton, A., Jonsson, N. (2018) Effect of Soluble Carbohydrate Diets on Reticuloruminal pH and Motility, and on Hematological and Biochemical Health Indicators in Cattle.

Kaboré, J., Camara, O., Koffi, M., Sanou, D., Ilboudo, H., Sakandé, H., Camara, M., De Meeûs, T., Ravel, S., Belem, A. M. G., MacLeod, A., Bucheton, B., Jamonneau, V., Thévenon, S. (2018) Differences in pathogenicity and virulence of Trypanosoma brucei gambiense field isolates in experimentally infected Balb/C mice. Infection, Genetics and Evolution, 63, pp. 269-276. (doi: 10.1016/j.meegid.2018.05.018)

Cross, P. C., van Manen, F. T., Viana, M., Almberg, E. S., Bachen, D., Brandell, E. E., Haroldson, M. A., Hudson, P. J., Stahler, D. R., Smith, D. W. (2018) Estimating distemper virus dynamics among wolves and grizzly bears using serology and Bayesian state‐space models. Ecology and Evolution, 8, pp. 8726-8735. (doi: 10.1002/ece3.4396)

Sambo, M., Hampson, K., Changalucha, J., Cleaveland, S., Lembo, T., Lushasi, K., Mbunda, E., Mtema, Z., Sikana, L., Johnson, P. C.D. (2018) Estimating the size of dog populations in Tanzania to inform rabies control. Veterinary Sciences, 5, (doi: 10.3390/vetsci5030077)

Kindsvater, H. K., Dulvy, N. K., Horswill, C., Juan-Jordá, M.-J., Mangel, M., Matthiopoulos, J. (2018) Overcoming the data crisis in biodiversity conservation. Trends in Ecology and Evolution, 33, pp. 676-688. (doi: 10.1016/j.tree.2018.06.004)

Casey-Bryars, M. et al. (2018) Waves of endemic foot-and-mouth disease in eastern Africa suggest feasibility of proactive vaccination approaches. Nature Ecology and Evolution, 2, pp. 1449-1457. (doi: 10.1038/s41559-018-0636-x)

Kerfua, S. D., Shirima, G., Kusiluka, L., Ayebazibwe, C., Mwebe, R., Cleaveland, S., Haydon, D. (2018) Spatial and temporal distribution of foot-and-mouth disease in four districts situated along the Uganda–Tanzania border: Implications for cross-border efforts in disease control. Onderstepoort Journal of Veterinary Research, 85, (doi: 10.4102/ojvr.v85i1.1528)

Mable, B. K., Brysting, A. K., Jørgensen, M. H., Carbonell, A. K.Z., Kiefer, C., Ruiz-Duarte, P., Lagesen, K., Koch, M. A. (2018) Adding complexity to complexity: gene family evolution in polyploids. Frontiers in Ecology and Evolution, 6, (doi: 10.3389/fevo.2018.00114)

Shrestha, A., Loukas, C., Le Kernec, J., Fioranelli, F., Busin, V., Jonsson, N., King, G., Tomlinson, M., Viora, L., Voute, L. (2018) Animal lameness detection with radar sensing. IEEE Geoscience and Remote Sensing Letters, 15, pp. 1189-1193. (doi: 10.1109/LGRS.2018.2832650)

Selinger, M., Wilkie, G. S., Tong, L., Gu, Q., Schnettler, E., Grubhoffer, L., Kohl, A. (2018) Corrigendum: Analysis of tick-borne encephalitis virus-induced host responses in human cells of neuronal origin and interferon-mediated protection. Journal of General Virology, 99, pp. 1147-1149. (doi: 10.1099/jgv.0.001109)

Brunker, K., Nadin-Davis, S., Biek, R. (2018) Genomic sequencing, evolution and molecular epidemiology of rabies virus. Revue scientifique et technique (International Office of Epizootics), 37, pp. 401-408. (doi: 10.20506/rst.37.2.2810)

Cleaveland, S., Thumbi, S.M., Sambo, M., Lugelo, A., Lushasi, K., Hampson, K., Lankester, F.J. (2018) Proof of concept of mass dog vaccination for the control and elimination of canine rabies. Revue scientifique et technique (International Office of Epizootics), 37, pp. 559-568. (doi: 10.20506/rst.37.2.2824)

Awad, H., Al-Hamidhi, S., El Hussein, A.-R. M., Yousif, Y. M. z., Taha, K. M., Salih, D. A., Weir, W., Babiker, H. (2018) Theileria lestoquardi in Sudan is highly diverse and genetically distinct from that in Oman. Infection, Genetics and Evolution, 62, pp. 46-52. (doi: 10.1016/j.meegid.2018.04.014)

Ciosi, M., Cumming, S. A., Alshammari, A. M., Symeonidi, E., Herzyk, P., Mcguinness, D., Galbraith, J., Hamilton, G., Monckton, D. G. (2018) Library preparation and MiSeq sequencing for the genotyping-by-sequencing of the Huntington disease HTT exon one trinucleotide repeat and the quantification of somatic mosaicism [Protocol] (doi: 10.21203/rs.2.1581/v2)

Lord, J. S., Torr, S. J., Auty, H. K., Brock, P. M., Byamungu, M., Hargrove, J. W., Morrison, L. J., Mramba, F., Vale, G. A., Stanton, M. C. (2018) Geostatistical models using remotely-sensed data predict savanna tsetse decline across the interface between protected and unprotected areas in Serengeti, Tanzania. Journal of Applied Ecology, 55, pp. 1997-2007. (doi: 10.1111/1365-2664.13091)

McIntyre, J., Hamer, K., Morrison, A. A., Bartley, D. J., Sargison, N., Devaney, E., Laing, R. (2018) Hidden in plain sight - multiple resistant species within a strongyle community. Veterinary Parasitology, 258, pp. 79-87. (doi: 10.1016/j.vetpar.2018.06.012)

Hertzog, J., Dias Junior, A. G., Rigby, R. E., Donald, C. L., Mayer, A., Sezgin, E., Song, C., Jin, B., Hublitz, P., Eggeling, C., Kohl, A., Rehwinkel, J. (2018) Infection with a Brazilian isolate of Zika virus generates RIG‐I stimulatory RNA and the viral NS5 protein blocks type I IFN induction and signalling. European Journal of Immunology, 48, pp. 1120-1136. (doi: 10.1002/eji.201847483)

Buckley, J., Holub, E. B., Koch, M. A., Vergeer, P., Mable, B. K. (2018) Restriction associated DNA-genotyping at multiple spatial scales in Arabidopsis lyrata reveals signatures of pathogen-mediated selection. BMC Genomics, 19, pp. 496. (doi: 10.1186/s12864-018-4806-7)

Mugasa, C. M., Villinger, J., Gitau, J., Ndungu, N., Ciosi, M., Masiga, D. (2018) Morphological re-description and molecular identification of Tabanidae (Diptera) in East Africa. ZooKeys, 796, pp. 117-144. (doi: 10.3897/zookeys.769.21144)

López-Camacho, C., Abbink, P., Larocca, R. A., Dejnirattisai, W., Boyd, M., Badamchi-Zadeh, A., Wallace, Z. R., Doig, J., Sanchez Velazquez, R., Neto, R. D. L., Coelho, D. F., Kim, Y. C., Donald, C. L., Owsianka, A., De Lorenzo, G., Kohl, A., Gilbert, S. C., Dorrell, L., Mongkolsapaya, J., Patel, A. H., Screaton, G. R., Barouch, D. H., Hill, A. V.S., Reyes-Sandoval, A. (2018) Rational Zika vaccine design via the modulation of antigen membrane anchors in chimpanzee adenoviral vectors. Nature Communications, 9, (doi: 10.1038/s41467-018-04859-5)

Brown, R., Hing, C. T., Fornace, K., Ferguson, H. M. (2018) Evaluation of resting traps to examine the behaviour and ecology of mosquito vectors in an area of rapidly changing land use in Sabah, Malaysian Borneo. Parasites and Vectors, 11, (doi: 10.1186/s13071-018-2926-1)

Gwinner, H., Capilla Lasheras, P., Cooper, C., Helm, B. (2018) 'Green incubation': avian offspring benefit from aromatic nest herbs through improved parental incubation behaviour. Proceedings of the Royal Society of London Series B: Biological Sciences, 285, (doi: 10.1098/rspb.2018.0376)

Allan, K. J., Halliday, J. E.B., Moseley, M., Carter, R. W., Ahmed, A., Goris, M. G.A., Hartskeerl, R. A., Keyyu, J., Kibona, T., Maro, V. P., Maze, M. J., Mmbaga, B. T., Tarimo, R., Crump, J. A., Cleaveland, S. (2018) Assessment of animal hosts of pathogenic Leptospira in northern Tanzania. PLoS Neglected Tropical Diseases, 12, (doi: 10.1371/journal.pntd.0006444)

Maze, M. J., Cash-Goldwasser, S., Rubach, M. P., Biggs, H. M., Galloway, R. L., Sharples, K. J., Allan, K. J., Halliday, J. E.B., Cleaveland, S., Shand, M. C., Muiruri, C., Kazwala, R. R., Saganda, W., Lwezaula, B. F., Mmbaga, B. T., Maro, V. P., Crump, J. A. (2018) Risk factors for human acute leptospirosis in northern Tanzania. PLoS Neglected Tropical Diseases, 12, (doi: 10.1371/journal.pntd.0006372)

Ferguson, H., Brock, P., Torr, S.J. (2018) Host species diversity and the transmission of vector-borne disease in low income countries. Oxford University Press

Fulton, A., Babayan, S.A., Taylor, M.D. (2018) Use of the Litomosoides sigmodontis infection model of filariasis to study type 2 immunity. Humana Press

Steketee, P. C., Vincent, I. M., Achcar, F., Giordani, F., Kim, D.-H., Creek, D. J., Freund, Y., Jacobs, R., Rattigan, K., Horn, D., Field, M. C., MacLeod, A., Barrett, M. P. (2018) Benzoxaborole treatment perturbs S-adenosyl-L-methionine metabolism in Trypanosoma brucei. PLoS Neglected Tropical Diseases, 12, (doi: 10.1371/journal.pntd.0006450)

Adolfi, A., Pondeville, E., Lynd, A., Lycett, G. J., Bourgouin, C. (2018) Multi-tissue GAL4-mediated gene expression in all Anopheles gambiae life stages using an endogenous polyubiquitin promoter. Insect Biochemistry and Molecular Biology, 96, pp. 1-9. (doi: 10.1016/j.ibmb.2018.03.005)

Strandin, T., Babayan, S. A., Forbes, K. M. (2018) Reviewing the effects of food provisioning on wildlife immunity. Philosophical Transactions of the Royal Society B: Biological Sciences, 373, (doi: 10.1098/rstb.2017.0088)

Fieberg, J. R., Forester, J. D., Street, G. M., Johnson, D. H., ArchMiller, A. A., Matthiopoulos, J. (2018) Used-habitat calibration plots: a new procedure for validating species distribution, resource selection, and step-selection models. Ecography, 41, pp. 737-752. (doi: 10.1111/ecog.03123)

Ascencio, M. E., Florin-Christensen, M., Mamoun, C. B., Weir, W., Shiels, B., Schnittger, L. (2018) Cysteine proteinase C1A paralog profiles correspond with phylogenetic lineages of pathogenic piroplasmids. Veterinary Sciences, 5, (doi: 10.3390/vetsci5020041)

Constantinoiu, C., Lew-Tabor, A., Jackson, L., Jorgensen, W., Piper, E., Mayer, D., Johnson, L., Venus, B., Jonsson, N. (2018) Local immune response to larvae of Rhipicephalus microplus in Santa Gertrudis cattle. Parasite Immunology, 40, (doi: 10.1111/pim.12515)

Turnbull, F., Jonsson, N., Kenyon, F., Skuce, P. J., Bisset, S. A. (2018) P-glycoprotein-9 and macrocyclic lactone resistance status in selected strains of the ovine gastrointestinal nematode, Teladorsagia circumcincta. International Journal for Parasitology: Drugs and Drug Resistance, 8, pp. 70-80. (doi: 10.1016/j.ijpddr.2018.01.004)

Terhzaz, S., Alford, L., Yeoh, J. G.C., Marley, R., Dornan, A. J., Dow, J. A.T., Davies, S. A. (2018) Renal neuroendocrine control of desiccation and cold tolerance by Drosophila suzukii. Pest Management Science, 74, pp. 800-810. (doi: 10.1002/ps.4663)

Viana, M., Faust, C. L., Haydon, D. T., Webster, J. P., Lamberton, P. H.L. (2018) The effects of subcurative praziquantel treatment on life-history traits and trade-offs in drug-resistant Schistosoma mansoni. Evolutionary Applications, 11, pp. 488-500. (doi: 10.1111/eva.12558)

Sallé, G., Laing, R., Cotton, J. A., Maitland, K., Martinelli, A., Holroyd, N., Tracey, A., Berriman, M., Smith, W. D., Newlands, G. F.J., Hanks, E., Devaney, E., Britton, C. (2018) Transcriptomic profiling of nematode parasites surviving vaccine exposure. International Journal for Parasitology, 48, pp. 395-402. (doi: 10.1016/j.ijpara.2018.01.004)

Crow, J., Mable, B., Murray, J.-A. (2018) Virtual Reality Poster Feedback Session Within Second Life.

Dickson, L. B., Ghozlane, A., Volant, S., Bouchier, C., Ma, L., Vega-Rúa, A., Dusfour, I., Jiolle, D., Paupy, C., Mayanja, M. N., Kohl, A., Lutwama, J. J., Duong, V., Lambrechts, L. (2018) Diverse laboratory colonies of Aedes aegypti harbor the same adult midgut bacterial microbiome. Parasites and Vectors, 11, (doi: 10.1186/s13071-018-2780-1)

Porphyre, T., Rich, K. M., Auty, H. K. (2018) Assessing the economic impact of vaccine availability when controlling foot and mouth disease outbreaks. Frontiers in Veterinary Science, 5, (doi: 10.3389/fvets.2018.00047)

Ohm, J. R., Baldini, F., Barreaux, P., Lefevre, T., Lynch, P. A., Suh, E., Whitehead, S. A., Thomas, M. B. (2018) Rethinking the extrinsic incubation period of malaria parasites. Parasites and Vectors, 11, (doi: 10.1186/s13071-018-2761-4)

Hemmink, J. D., Sitt, T., Pelle, R., de Klerk-Lorist, L.-M., Shiels, B., Toye, P. G., Morrison, W. I., Weir, W. (2018) Ancient diversity and geographical sub-structuring in African buffalo Theileria parva populations revealed through metagenetic analysis of antigen-encoding loci. International Journal for Parasitology, 48, pp. 287-296. (doi: 10.1016/j.ijpara.2017.10.006)

Zandawala, M., Marley, R., Davies, S. A., Nässel, D. R. (2018) Characterization of a set of abdominal neuroendocrine cells that regulate stress physiology using colocalized diuretic peptides in Drosophila. Cellular and Molecular Life Sciences, 75, pp. 1099-1115. (doi: 10.1007/s00018-017-2682-y)

Lombaert, E., Ciosi, M., Miller, N. J., Sappington, T. W., Blin, A., Guillemaud, T. (2018) Colonization history of the western corn rootworm (Diabrotica virgifera virgifera) in North America: insights from random forest ABC using microsatellite data. Biological Invasions, 20, pp. 665-677. (doi: 10.1007/s10530-017-1566-2)

Büscher, P. et al. (2018) Do cryptic reservoirs threaten gambiense-sleeping sickness elimination? Trends in Parasitology, 34, pp. 197-207. (doi: 10.1016/j.pt.2017.11.008)

Carugati, M., Biggs, H. M., Maze, M. J., Stoddard, R. A., Cash-Goldwasser, S., Hertz, J. T., Halliday, J. E.B., Saganda, W., Lwezaula, B. F., Kazwala, R. R., Cleaveland, S., Maro, V. P., Rubach, M. P., Crump, J. A. (2018) Incidence of human brucellosis in the Kilimanjaro Region of Tanzania in the periods 2007-2008 and 2012-2014. Transactions of the Royal Society of Tropical Medicine and Hygiene, 112, pp. 136-143. (doi: 10.1093/trstmh/try033)

Kimuda, M. P., Noyes, H., Mulindwa, J., Enyaru, J., Alibu, V. P., Sidibe, I., Mumba Ngoyi, D., Hertz-Fowler, C., MacLeod, A., Tastan Bishop, Ö., Matovu, E. (2018) No evidence for association between APOL1 kidney disease risk alleles and Human African Trypanosomiasis in two Ugandan populations. PLoS Neglected Tropical Diseases, 12, (doi: 10.1371/journal.pntd.0006300)

Babayan, S. A., Liu, W., Hamilton, G., Kilbride, E., Rynkiewicz, E. C., Clerc, M., Pedersen, A. B. (2018) The immune and non-immune pathways that drive chronic gastrointestinal helminth burdens in the wild. Frontiers in Immunology, 9, (doi: 10.3389/fimmu.2018.00056)

Doyle, S. R., Laing, R., Bartley, D. J., Britton, C., Chaudhry, U., Gilleard, J. S., Holroyd, N., Mable, B. K., Maitland, K., Morrison, A. A., Tait, A., Tracey, A., Berriman, M., Devaney, E., Cotton, J. A., Sargison, N. D. (2018) A genome resequencing-based genetic map reveals the recombination landscape of an outbred parasitic nematode in the presence of polyploidy and polyandry. Genome Biology and Evolution, 10, pp. 396-409. (doi: 10.1093/gbe/evx269)

Zmurko, J., Vasey, D. B., Donald, C. L., Armstrong, A. A., McKee, M. L., Kohl, A., Clayton, R. F. (2018) Mitigating the risk of Zika virus contamination of raw materials and cell lines in the manufacture of biologicals. Journal of General Virology, 99, pp. 219-229. (doi: 10.1099/jgv.0.000995)

Howson, E.L.A., Armson, B., Lyons, N. A., Chepkwony, E., Kasanga, C. J., Kandusi, S., Ndusilo, N., Yamazaki, W., Gizaw, D., Cleaveland, S., Lembo, T., Rauh, R., Nelson, W. M., Wood, B. A., Mioulet, V., King, D. P., Fowler, V. L. (2018) Direct detection and characterization of foot-and-mouth disease virus in East Africa using a field-ready real-time PCR platform. Transboundary and Emerging Diseases, 65, pp. 221-231. (doi: 10.1111/tbed.12684)

McKimmie, C.S., Pingen, M., Bryden, S.R., Lefteri, D.A. (2018) Host inflammatory response to mosquito bites enhances the severity of arbovirus infection. ISBT Science Series, 13, pp. 76-79. (doi: 10.1111/voxs.12384)

Brunker, K., Lemey, P., Marston, D. A., Fooks, A. R., Lugelo, A., Ngeleja, C., Hampson, K., Biek, R. (2018) Landscape attributes governing local transmission of an endemic zoonosis: rabies virus in domestic dogs. Molecular Ecology, 27, pp. 773-788. (doi: 10.1111/mec.14470)

Cash-Goldwasser, S., Maze, M. J., Rubach, M. P., Biggs, H. M., Stoddard, R. A., Sharples, K. J., Halliday, J. E.B., Cleaveland, S., Shand, M. C., Mmbaga, B. T., Muiruri, C., Saganda, W., Lwezaula, B. F., Kazwala, R. R., Maro, V. P., Crump, J. A. (2018) Risk factors for human brucellosis in northern Tanzania. American Journal of Tropical Medicine and Hygiene, 98, pp. 598-606. (doi: 10.4269/ajtmh.17-0125)

Varjak, M., Dietrich, I., Sreenu, V. B., Till, B. E., Merits, A., Kohl, A., Schnettler, E. (2018) Spindle-E acts antivirally against alphaviruses in mosquito cells. Viruses, 10, (doi: 10.3390/v10020088)

Hover, S., Foster, B., Fontana, J., Kohl, A., Goldstein, S. A.N., Barr, J. N., Mankouri, J. (2018) Bunyavirus requirement for endosomal K+ reveals new roles of cellular ion channels during infection. PLoS Pathogens, 14, (doi: 10.1371/journal.ppat.1006845)

Currier, R. B., Cooper, A., Burrell-Saward, H., MacLeod, A., Alsford, S. (2018) Decoding the network of Trypanosoma brucei proteins that determines sensitivity to apolipoprotein-L1. PLoS Pathogens, 14, (doi: 10.1371/journal.ppat.1006855)

Behrman, E. L., Howick, V. M., Kapun, M., Staubach, F., Bergland, A. O., Petrov, D. A., Lazzaro, B. P., Schmidt, P. S. (2018) Rapid seasonal evolution in innate immunity of wild Drosophila melanogaster. Proceedings of the Royal Society of London Series B: Biological Sciences, 285, (doi: 10.1098/rspb.2017.2599)

Jonsson, N. N., Klafke, G., Corley, S. W., Tidwell, J., Berry, C. M., Koh-Tan, H.H. C. (2018) Molecular biology of amitraz resistance in cattle ticks of the genus Rhipicephalus. Frontiers in Bioscience: Landmark, 23, pp. 796-810. (doi: 10.2741/4617)

Denwood, M.J., Kleen, J.L., Jensen, D.B., Jonsson, N.N. (2018) Describing temporal variation in reticuloruminal pH using continuous monitoring data. Journal of Dairy Science, 101, pp. 233-245. (doi: 10.3168/jds.2017-12828)

Lustigman, S., Makepeace, B. L., Klei, T. R., Babayan, S. A., Hotez, P., Abraham, D., Bottazzi, M. E. (2018) Onchocerca volvulus: the road from basic biology to a vaccine. Trends in Parasitology, 34, pp. 64-79. (doi: 10.1016/j.pt.2017.08.011)

Yakob, L., Lloyd, A. L., Kao, R. R., Ferguson, H. M., Brock, P. M., Drakeley, C., Bonsall, M. B. (2018) Plasmodium knowlesi invasion following spread by infected mosquitoes, macaques and humans. Parasitology, 145, pp. 101-110. (doi: 10.1017/S0031182016002456)

Rodriguez-Vivas, R. I., Jonsson, N. N., Bhushan, C. (2018) Strategies for the control of Rhipicephalus microplus ticks in a world of conventional acaricide and macrocyclic lactone resistance. Parasitology Research, 117, pp. 3-29. (doi: 10.1007/s00436-017-5677-6)

Babayan, S. A., Sinclair, A., Duprez, J. S., Selman, C. (2018) Chronic helminth infection burden differentially affects haematopoietic cell development while ageing selectively impairs adaptive responses to infection. Scientific Reports, 8, (doi: 10.1038/s41598-018-22083-5)

Lourenço-de-Oliveira, R., Marques, J. T., Sreenu, V. B., Nten, C. A., Guimarães Rocha Aguiarr, E. R., Varjak, M., Kohl, A., Failloux, A.-B. (2018) Culex quinquefasciatus mosquitoes do not support replication of Zika virus. Journal of General Virology, 99, pp. 258-264. (doi: 10.1099/jgv.0.000949)

World Health Organization, (2018) Efficacy-testing of Traps for Control of Aedes Spp. Mosquito Vectors.

Woodford, L., Bianco, G., Ivanova, Y., Dale, M., Elmer, K., Rae, F., Larcombe, S. D., Helm, B., Ferguson, H. M., Baldini, F. (2018) Vector species-specific association between natural Wolbachia infections and avian malaria in black fly populations. Scientific Reports, 8, (doi: 10.1038/s41598-018-22550-z)

Cleaveland, S., Hampson, K. (2017) Rabies elimination research: juxtaposing optimism, pragmatism and realism. Proceedings of the Royal Society of London Series B: Biological Sciences, 284, (doi: 10.1098/rspb.2017.1880)

Tabor, A. E., Ali, A., Rehman, G., Garcia, G. R., Zangirolamo, A. F., Malardo, T., Jonsson, N. N. (2017) Cattle tick Rhipicephalus microplus-host interface: a review of resistant and susceptible host responses. Frontiers in Cellular and Infection Microbiology, 7, (doi: 10.3389/fcimb.2017.00506)

Royle, J., Donald, C. L., Merits, A., Kohl, A., Varjak, M. (2017) Differential effects of lipid biosynthesis inhibitors on Zika and Semliki Forest viruses. Veterinary Journal, 230, pp. 62-64. (doi: 10.1016/j.tvjl.2017.10.009)

Boden, L. A., Auty, H., Reeves, A., Rydevik, G., Bessell, P., McKendrick, I. J. (2017) Animal health surveillance in Scotland in 2030: using scenario planning to develop strategies in the context of “Brexit” Frontiers in Veterinary Science, 4, (doi: 10.3389/fvets.2017.00201)

Bakuza, J. S., Gillespie, R., Nkwengulila, G., Adam, A., Kilbride, E., Mable, B. K. (2017) Assessing S. mansoni prevalence in Biomphalaria snails in the Gombe ecosystem of western Tanzania: the importance of DNA sequence data for clarifying species identification. Parasites and Vectors, 10, (doi: 10.1186/s13071-017-2525-6)

Helm, B., Visser, M. E., Schwartz, W., Kronfeld-Schor, N., Gerkema, M., Piersma, T., Bloch, G. (2017) Two sides of a coin: ecological and chronobiological perspectives of timing in the wild. Philosophical Transactions of the Royal Society B: Biological Sciences, 372, (doi: 10.1098/rstb.2016.0246)

Schwartz, W. J., Helm, B., Gerkema, M. P. (2017) Wild clocks: preface and glossary. Philosophical Transactions of the Royal Society B: Biological Sciences, 372, (doi: 10.1098/rstb.2017.0211)

Gillan, V., Maitland, K., Laing, R., Gu, H., Marks, N. D., Winter, A. D., Bartley, D., Morrison, A., Skuce, P. J., Rezansoff, A. M., Gilleard, J. S., Martinelli, A., Britton, C., Devaney, E. (2017) Increased expression of a microRNA correlates with anthelmintic resistance in parasitic nematodes. Frontiers in Cellular and Infection Microbiology, 7, (doi: 10.3389/fcimb.2017.00452)

Ofon, E., Noyes, H., Mulindwa, J., Ilboudo, H., Simuunza, M., Ebo'o, V., Njiokou, F., Koffi, M., Bucheton, B., Fogue, P., Hertz-Fowler, C., MacLeod, A., Simo, G. (2017) A polymorphism in the haptoglobin, haptoglobin related protein locus is associated with risk of human sleeping sickness within Cameroonian populations. PLoS Neglected Tropical Diseases, 11, (doi: 10.1371/journal.pntd.0005979)

Leader, D. P., Krause, S. A., Pandit, A., Davies, S. A., Dow, J. A.T. (2017) FlyAtlas 2: a new version of the Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data. Nucleic Acids Research, 46, pp. D809-D815. (doi: 10.1093/nar/gkx976)

Ngowo, H. S., Kaindoa, E. W., Matthiopoulos, J., Ferguson, H. M., Okumu, F. O. (2017) Variations in household microclimate affect outdoor-biting behaviour of malaria vectors. Wellcome Open Research, 2, (doi: 10.12688/wellcomeopenres.12928.1)

Ahouty, B., Koffi, M., Ilboudo, H., Simo, G., Matovu, E., Mulindwa, J., Hertz-Fowler, C., Bucheton, B., Sidibé, I., Jamonneau, V., MacLeod, A., Noyes, H., N’Guetta, S.-P. (2017) Candidate genes-based investigation of susceptibility to Human African Trypanosomiasis in Côte d’Ivoire. PLoS Neglected Tropical Diseases, 11, (doi: 10.1371/journal.pntd.0005992)

Varjak, M., Donald, C. L., Mottram, T. J., Sreenu, V. B., Merits, A., Maringer, K., Schnettler, E., Kohl, A. (2017) Characterization of the Zika virus induced small RNA response in Aedes aegypti cells. PLoS Neglected Tropical Diseases, 11, (doi: 10.1371/journal.pntd.0006010)

Jacquot, M., Nomikou, K., Palmarini, M., Mertens, P., Biek, R. (2017) Bluetongue virus spread in Europe is a consequence of climatic, landscape and vertebrate host factors as revealed by phylogeographic inference. Proceedings of the Royal Society of London Series B: Biological Sciences, 284, (doi: 10.1098/rspb.2017.0919)

Åkesson, S., Ilieva, M., Karagicheva, J., Rakhimberdiev, E., Tomotani, B., Helm, B. (2017) Timing avian long-distance migration: from internal clock mechanisms to global flights. Philosophical Transactions of the Royal Society B: Biological Sciences, 372, (doi: 10.1098/rstb.2016.0252)

Rodríguez, A., Burgon, J., Lyra, M., Irisarri, I., Baurain, D., Blaustein, L., Göçmen, B., Künzel, S., Mable, B. K., Nolte, A. W., Veith, M., Steinfartz, S., Elmer, K. R., Philippe, H., Vences, M. (2017) Inferring the shallow phylogeny of true salamanders (Salamandra) by multiple phylogenomic approaches. Molecular Phylogenetics and Evolution, 115, pp. 16-26. (doi: 10.1016/j.ympev.2017.07.009)

Dow, J. A.T. (2017) The essential roles of metal ions in insect homeostasis and physiology. Current Opinion in Insect Science, 23, pp. 43-50. (doi: 10.1016/j.cois.2017.07.001)

Bakuza, J. S., Denwood, M. J., Nkwengulila, G., Mable, B. K. (2017) Estimating the prevalence and intensity of Schistosoma mansoni infection among rural communities in Western Tanzania: the influence of sampling strategy and statistical approach. PLoS Neglected Tropical Diseases, 11, (doi: 10.1371/journal.pntd.0005937)

Correia-Gomes, C., Henry, M. K., Auty, H. K., Gunn, G. J. (2017) Exploring the role of small-scale livestock keepers for national biosecurity—the pig case. Preventive Veterinary Medicine, 145, pp. 7-15. (doi: 10.1016/j.prevetmed.2017.06.005)

Geoghegan, V., Stainton, K., Rainey, S. M., Ant, T. H., Dowle, A. A., Larson, T., Hester, S., Charles, P. D., Thomas, B., Sinkins, S. P. (2017) Perturbed cholesterol and vesicular trafficking associated with dengue blocking in Wolbachia-infected Aedes aegypti cells. Nature Communications, 8, (doi: 10.1038/s41467-017-00610-8)

Husmeier, D., Ferguson, E., Matthiopoulos, J., Insall, R. (2017) Statistical Inference of the Drivers of Collective Cell Movement.

Nakagawa, S., Johnson, P. C.D., Schielzeth, H. (2017) The coefficient of determination R2 and intra-class correlation coefficient from generalized linear mixed-effects models revisited and expanded. Journal of the Royal Society: Interface, 14, (doi: 10.1098/rsif.2017.0213)

Terron-Canedo, N., Weir, W., Nicolson, L., Britton, C., Nasir, L. (2017) Differential expression of microRNAs in bovine papillomavirus type 1 transformed equine cells. Veterinary and Comparative Oncology, 15, pp. 764-774. (doi: 10.1111/vco.12216)

Jackson, A., Ellis, K.A., McGoldrick, J., Jonsson, N.N., Stear, M.J., Forbes, A.B. (2017) Targeted anthelmintic treatment of parasitic gastroenteritis in first grazing season dairy calves using daily live weight gain as an indicator. Veterinary Parasitology, 244, pp. 85-90. (doi: 10.1016/j.vetpar.2017.07.023)

Trewby, H., Wright, D. M., Skuce, R. A., McCormick, C., Mallon, T. R., Presho, E. L., Kao, R. R., Haydon, D. T., Biek, R. (2017) Relative abundance of Mycobacterium bovis molecular types in cattle: a simulation study of potential epidemiological drivers. BMC Veterinary Research, 13, (doi: 10.1186/s12917-017-1190-5)

Kaboré, J. W., Ilboudo, H., Noyes, H., Camara, O., Kaboré, J., Camara, M., Koffi, M., Lejon, V., Jamonneau, V., MacLeod, A., Hertz-Fowler, C., Belem, A. M. G., Matovu, E., Bucheton, B., Sidibe, I. (2017) Candidate gene polymorphisms study between human African trypanosomiasis clinical phenotypes in Guinea. PLoS Neglected Tropical Diseases, 11, (doi: 10.1371/journal.pntd.0005833)

Stear, M., Fairlie-Clarke, K., Jonsson, N., Mallard, B., Groth, D. (2017) Genetic variation in immunity and disease resistance in dairy cows and other livestock. Burleigh Dodds

Conan, A., O’Reilly, C. E., Ogola, E., Ochieng, J. B., Blackstock, A. J., Omore, R., Ochieng, L., Moke, F., Parsons, M. B., Xiao, L., Roellig, D., Farag, T. H., Nataro, J. P., Kotloff, K. L., Levine, M. M., Mintz, E. D., Breiman, R. F., Cleaveland, S., Knobel, D. (2017) Animal-related factors associated with moderate-to-severe diarrhea in children younger than five years in western Kenya: A matched case-control study. PLoS Neglected Tropical Diseases, 11, (doi: 10.1371/journal.pntd.0005795)

Hoffmann, C. et al. (2017) Persistent anthrax as a major driver of wildlife mortality in a tropical rainforest. Nature, 548, pp. 82-86. (doi: 10.1038/nature23309)

Selinger, M., Wilkie, G. S., Tong, L., Gu, Q., Schnettler, E., Grubhoffer, L., Kohl, A. (2017) Analysis of tick-borne encephalitis virus-induced host responses in human cells of neuronal origin and interferon-mediated protection. Journal of General Virology, 98, pp. 2043-2060. (doi: 10.1099/jgv.0.000853)

Van Doren, B. M., Campagna, L., Helm, B., Illera, J. C., Lovette, I. J., Liedvogel, M. (2017) Correlated patterns of genetic diversity and differentiation across an avian family. Molecular Ecology, 26, pp. 3982-3997. (doi: 10.1111/mec.14083)

Al-Fahdi, A., Alqamashoui, B., Al-Hamidhi, S., Kose, O., Tageldin, M. H., Bobade, P., Johnson, E. H., Hussain, A.-R., Karagenc, T., Tait, A., Shiels, B., Bilgic, H. B., Babiker, H. (2017) Molecular surveillance of Theileria parasites of livestock in Oman. Ticks and Tick-borne Diseases, 8, pp. 741-748. (doi: 10.1016/j.ttbdis.2017.05.008)

Ferguson, E. A., Matthiopoulos, J., Insall, R. H., Husmeier, D. (2017) Statistical inference of the mechanisms driving collective cell movement. Journal of the Royal Statistical Society: Series C (Applied Statistics), 66, pp. 869-890. (doi: 10.1111/rssc.12203)

Hawkes, F., Manin, B. O., Ng, S. H., Torr, S. J., Drakeley, C., Chua, T. H., Ferguson, H. M. (2017) Evaluation of electric nets as means to sample mosquito vectors host-seeking on humans and primates. Parasites and Vectors, 10, (doi: 10.1186/s13071-017-2277-3)

Halliday, J. E.B., Hampson, K., Hanley, N., Lembo, T., Sharp, J. P., Haydon, D. T., Cleaveland, S. (2017) Driving improvements in emerging disease surveillance through locally-relevant capacity strengthening. Science, 357, pp. 146-148. (doi: 10.1126/science.aam8332)

Pollock, C., Capilla-Lasheras, P., McGill, R. A.R., Helm, B., Dominoni, D. M. (2017) Integrated behavioural and stable isotope data reveal altered diet linked to low breeding success in urban-dwelling blue tits (Cyanistes caeruleus) Scientific Reports, 7, (doi: 10.1038/s41598-017-04575-y)

Ferguson, E. A., Matthiopoulos, J., Husmeier, D. (2017) Constructing Wildebeest Density Distributions by Spatio-temporal Smoothing of Ordinal Categorical Data Using GAMs.

Luintel, A., Lowe, P., Cooper, A., MacLeod, A., Büscher, P., Brooks, T., Brown, M. (2017) Case of Nigeria-acquired Human African trypanosomiasis in United Kingdom, 2016. Emerging Infectious Diseases, 23, pp. 1225-1227. (doi: 10.3201/eid2307.170695)

Yeoh, J. G.C., Pandit, A. A., Zandawala, M., Nässel, D. R., Davies, S.-A., Dow, J. (2017) DINeR: Database for Insect Neuropeptide Research. Insect Biochemistry and Molecular Biology, 86, pp. 9-19. (doi: 10.1016/j.ibmb.2017.05.001)

Correia-Gomes, C., Auty, H. K. (2017) Detecting and managing new animal health threats: how vulnerable are we? Veterinary Record, 181, pp. 65-66. (doi: 10.1136/vr.j3355)

Cumberworth, S. L., Barrie, J. A., Cunningham, M. E., Gomes de Figueiredo, D. P., Schultz, V., Wilder-Smith, A. J., Brennan, B., Pena, L. J., de Oliveira França, R. F., Linington, C., Barnett, S. C., Willison, H. J., Kohl, A., Edgar, J. M. (2017) Zika virus tropism and interactions in myelinating neural cell cultures: CNS cells and myelin are preferentially affected. Acta Neuropathologica Communications, 5, (doi: 10.1186/s40478-017-0450-8)

Trewby, H., Nadin-Davis, S. A., Real, L. A., Biek, R. (2017) Processes underlying rabies virus incursions across US–Canada Border as revealed by whole-genome phylogeography. Emerging Infectious Diseases, 23, pp. 1454-1461. (doi: 10.3201/eid2309.170325)

Capilla-Lasheras, P., Dominoni, D. M., Babayan, S. A., O'Shaughnessy, P. J., Mladenova, M., Woodford, L., Pollock, C. J., Barr, T., Baldini, F., Helm, B. (2017) Elevated immune gene expression is associated with poor reproductive success of urban blue tits. Frontiers in Ecology and Evolution, 5, (doi: 10.3389/fevo.2017.00064)

Coultous, R. M., Raftery, A. G., Shiels, B. R., Sutton, D. G.M., Weir, W. (2017) Molecular confirmation of Sarcocystis fayeri in a donkey. Veterinary Parasitology, 240, pp. 30-33. (doi: 10.1016/j.vetpar.2017.04.026)

Lempereur, L., Larcombe, S., Durrani, Z., Karagenc, T., Bilgic, H. B., Bakirci, S., Hacilarlioglu, S., Kinnaird, J., Thompson, J., Weir, W., Shiels, B. (2017) Identification of candidate transmission-blocking antigen genes in Theileria annulata and related vector-borne apicomplexan parasites. BMC Genomics, 18, (doi: 10.1186/s12864-017-3788-1)

Cleaveland, S., Sharp, J., Abela-Ridder, B., Allan, K.J., Buza, J., Crump, J.A., Davis, A., Del Rio Vilas, V.J., de Glanville, W.A., Kazwala, R.R., Kibona, T., Lankester, F.J., Lugelo, A.L., Mmbaga, B.T., Rubach, M.P., Swai, E.S., Waldman, L., Haydon, D.T., Hampson, K., Halliday, J.E.B. (2017) One Health contributions towards more effective and equitable approaches to health in low- and middle-income countries. Philosophical Transactions of the Royal Society B: Biological Sciences, 372, (doi: 10.1098/rstb.2016.0168)

Ilboudo, H., Noyes, H., Mulindwa, J., Kimuda, M. P., Koffi, M., Kaboré, J. W., Ahouty, B., Ngoyi, D. M., Fataki, O., Simo, G., Ofon, E., Enyaru, J., Chisi, J., Kamoto, K., Simuunza, M., Alibu, V. P., Lejon, V., Jamonneau, V., Macleod, A., Camara, M., Bucheton, B., Hertz-Fowler, C., Sidibe, I., Matovu, E. (2017) Introducing the TrypanoGEN biobank: a valuable resource for the elimination of human African trypanosomiasis. PLoS Neglected Tropical Diseases, 11, (doi: 10.1371/journal.pntd.0005438)

Millins, C., Gilbert, L., Medlock, J., Hansford, K., Thompson, D. B.A., Biek, R. (2017) Effects of conservation management of landscapes and vertebrate communities on Lyme borreliosis risk in the United Kingdom. Philosophical Transactions of the Royal Society B: Biological Sciences, 372, (doi: 10.1098/rstb.2016.0123)

Howson, E.L.A., Armson, B., Madi, M., Kasanga, C.J., Kandusi, S., Sallu, R., Chepkwony, E., Siddle, A., Martin, P., Wood, J., Mioulet, V., King, D.P., Lembo, T., Cleaveland, S., Fowler, V.L. (2017) Evaluation of two lyophilized molecular assays to rapidly detect foot-and-mouth disease virus directly from clinical samples in field settings. Transboundary and Emerging Diseases, 64, pp. 861-871. (doi: 10.1111/tbed.12451)

Laing, R., Gillan, V., Devaney, E. (2017) Ivermectin - old drug, new tricks? Trends in Parasitology, 33, pp. 463-472. (doi: 10.1016/j.pt.2017.02.004)

Cooper, A., Ilboudo, H., Alibu, V. P., Ravel, S., Enyaru, J., Weir, W., Noyes, H., Capewell, P., Camara, M., Milet, J., Jamonneau, V., Camara, O., Matovu, E., Bucheton, B., MacLeod, A. (2017) APOL1 renal risk variants have contrasting resistance and susceptibility associations with African trypanosomiasis. eLife, 6, (doi: 10.7554/eLife.25461)

Apfelbeck, B. A., Helm, B., Illera, J. C., Mortega, K. G., Smiddy, P., Evans, N. P. (2017) Baseline and stress-induced levels of corticosterone in male and female Afrotropical and European temperate stonechats during breeding. BMC Evolutionary Biology, 17, (doi: 10.1186/s12862-017-0960-9)

Ponnudurai, G., Larcombe, S., Velusamy, R., Rani, N., Kolte, S.W., Rubinibala, B., Alagesan, A., Rekha, B., Shiels, B. (2017) Prevalence of tick-borne pathogens in co-grazed dairy bovines differs by region and host-type in Tamil Nadu, India. Advances in Dairy Research, 5, (doi: 10.4172/2329-888X.1000177)

Davies, S. (2017) nEUROSTRESSPEP: Novel biocontrol agents for insect pests from neuroendocrinology. International Pest Control, 59, pp. 164-165.

Varjak, M., Maringer, K., Watson, M., Sreenu, V., Fredericks, A. C., Pondeville, E., Kohl, A., Sterk, J., Kean, J., Vazeille, M., Failloux, A.-B., Donald, C. L., Schnettler, E. (2017) Aedes aegypti Piwi4 is a noncanonical PIWI protein involved in antiviral responses. mSphere, 2, (doi: 10.1128/mSphere.00144-17)

Cumberworth, S., Clark, J. J., Kohl, A., Donald, C. L. (2017) Inhibition of type I interferon induction and signalling by mosquito-borne flaviviruses. Cellular Microbiology, 19, (doi: 10.1111/cmi.12737)

Dietrich, I., Jansen, S., Fall, G., Lorenzen, S., Rudolf, M., Huber, K., Heitmann, A., Schicht, S., Ndiaye, E. H., Watson, M., Castelli, I., Brennan, B., Elliott, R. M., Diallo, M., Sall, A. A., Failloux, A.-B., Schnettler, E., Kohl, A., Becker, S. C., Duprex, W. P. (2017) RNA interference restricts rift valley fever virus in multiple insect systems. mSphere, 2, (doi: 10.1128/mSphere.00090-17)

Bilgic, H. B., Bakırcı, S., Kose, O., Unlu, A. H., Hacılarlıoglu, S., Eren, H., Weir, W., Karagenc, T. (2017) Prevalence of tick-borne haemoparasites in small ruminants in Turkey and diagnostic sensitivity of single-PCR and RLB. Parasites and Vectors, 10, (doi: 10.1186/s13071-017-2151-3)

Apfelbeck, B., Mortega, K. G., Flinks, H., Illera, J. C., Helm, B. (2017) Testosterone, territorial response, and song in seasonally breeding tropical and temperate Stonechats. BMC Evolutionary Biology, 17, (doi: 10.1186/s12862-017-0944-9)

Hamilton, M. J., Robb, Y., Cumming, S., Gregory, H., Duncan, A., Rahman, M., McKeown, A., McWilliam, C., Dean, J., Wilcox, A., Farrugia, M. E., Cooper, A., McGhie, J., Adam, B., Petty, R., Longman, C., Findlay, I., Japp, A., Monckton, D. G., Denvir, M. A., The Scottish Myotonic Dystrophy Consortium, (2017) Correction: Elevated plasma levels of cardiac troponin-I predict left ventricular systolic dysfunction in patients with myotonic dystrophy type 1: A multicentre cohort follow-up study. PLoS ONE, 12, (doi: 10.1371/journal.pone.0175615)

Burt, F. J., Chen, W., Miner, J. J., Lenschow, D. J., Merits, A., Schnettler, E., Kohl, A., Rudd, P. A., Taylor, A., Herrero, L. J., Zaid, A., Ng, L. F.P., Mahalingam, S. (2017) Chikungunya virus: an update on the biology and pathogenesis of this emerging pathogen. Lancet Infectious Diseases, 17, pp. e107-e117. (doi: 10.1016/S1473-3099(16)30385-1)

Craft, M.E., Vial, F., Miguel, E., Cleaveland, S., Ferdinands, A., Packer, C. (2017) Interactions between domestic and wild carnivores around the greater Serengeti ecosystem. Animal Conservation, 20, pp. 193-204. (doi: 10.1111/acv.12305)

Kolte, S. W., Larcombe, S. D., Jadhao, S. G., Magar, S. P., Warthi, G., Kurkure, N. V., Glass, E. J., Shiels, B. R. (2017) PCR diagnosis of tick-borne pathogens in Maharashtra state, India indicates fitness cost associated with carrier infections is greater for crossbreed than native cattle breeds. PLoS ONE, 12, (doi: 10.1371/journal.pone.0174595)

Hamilton, M., Robb, Y., Cumming, S., Gregory, H., Duncan, A., Rahman, M., McKeown, A., McWilliam, C., Dean, J., Wilcox, A., Farrugia, M. E., Cooper, A., McGhie, J., Adam, B., Petty, R., Longman, C., Findlay, I., Japp, A., Monckton, D. C., Denvir, M. A. (2017) Elevated plasma levels of cardiac troponin-I predict left ventricular systolic dysfunction in patients with myotonic dystrophy type 1: a multicentre cohort follow-up study. PLoS ONE, 12, (doi: 10.1371/journal.pone.0174166)

Ryan, M. R., Cleaveland, S. (2017) Zoonotic diseases: sharing insights from interdisciplinary research. Veterinary Record, 180, pp. 270-271. (doi: 10.1136/vr.j1261)

Nadin-Davis, S. A., Colville, A., Trewby, H., Biek, R., Real, L. (2017) Application of high-throughput sequencing to whole rabies viral genome characterisation and its use for phylogenetic re-evaluation of a raccoon strain incursion into the province of Ontario. Virus Research, 232, pp. 123-133. (doi: 10.1016/j.virusres.2017.02.007)

Coultous, R., Weir, W., Sutton, D. (2017) Equine piroplasmosis study. Veterinary Record, 180, pp. 258. (doi: 10.1136/vr.j1153)

Lee, S. M., Williamson, K., Weir, W., Hulme-Moir, L., Haining, H. (2017) Use of hyaluronidase in the comparison between manual and automated hematology analysis with the ADVIA 120 to improve analysis of feline body cavity effusions. Journal of Veterinary Diagnostic Investigation, 29, pp. 212-216. (doi: 10.1177/1040638716685133)

Kinnaird, J. H., Singh, M., Gillan, V., Weir, W., Calder, E. D.D., Hostettler, I., Tatu, U., Devaney, E., Shiels, B. R. (2017) Characterization of HSP90 isoforms in transformed bovine leukocytes infected with Theileria annulata. Cellular Microbiology, 19, (doi: 10.1111/cmi.12669)

Sambo, M., Johnson, P. C.D., Hotopp, K., Changalucha, J., Cleaveland, S., Kazwala, R., Lembo, T., Lugelo, A., Lushasi, K., Maziku, M., Mbunda, E., Mtema, Z., Sikana, L., Townsend, S. E., Hampson, K. (2017) Comparing methods of assessing dog rabies vaccination coverage in rural and urban communities in Tanzania. Frontiers in Veterinary Science, 4, (doi: 10.3389/fvets.2017.00033)

Ladbury, G., Allan, K. J., Cleaveland, S., Davis, A., de Glanville, W. A., Forde, T. L., Halliday, J. E.B., Haydon, D. T., Kibiki, G., Kiwelu, I., Lembo, T., Maro, V., Mmbaga, B. T., Ndyetabura, T., Sharp, J., Thomas, K., Zadoks, R. N. (2017) One health research in Northern Tanzania – challenges and progress. East African Health Research Journal, 1, pp. 8-18. (doi: 10.24248/EAHRJ-D-16-00379)

Bilgiç, H. B., Ünlü, A. H., Aksulu, A., Bakırcı, S., Hacılarlıoğlu, S., Eren, H., Weir, W., Karagenç, T. (2017) Selection of genetic markers to determine diversity in Theileria annulata populations after recombination. Turkiye Parazitologi Dergisi = Turkish Journal of Parasitology, 41, pp. 9-18. (doi: 10.5152/tpd.2017.4970)

Howick, V. M., Lazzaro, B. P. (2017) The genetic architecture of defence as resistance to and tolerance of bacterial infection in Drosophila melanogaster. Molecular Ecology, 26, pp. 1533-1546. (doi: 10.1111/mec.14017)

Mpolya, E. A., Lembo, T., Lushasi, K., Mancy, R., Mbunda, E. M., Maziku, M., Makungu, S., Sikana, L., Jaswant, G., Townsend, S., Meslin, F.-X., Abela-Ridder, B., Ngeleja, C., Changalucha, J., Mtema, Z., Sambo, M., Mchau, G., Rysava, K., Nanai, A., Kazwala, R., Cleaveland, S., Hampson, K. (2017) Towards elimination of dog-mediated human rabies: experiences from implementing a large-scale demonstration project in Southern Tanzania. Frontiers in Veterinary Science, 4, (doi: 10.3389/fvets.2017.00021)

Porphyre, T., Correia-Gomes, C., Chase-Topping, M. E., Gamado, K., Auty, H. K., Hutchinson, I., Reeves, A., Gunn, G. J., Woolhouse, M. E.J. (2017) Vulnerability of the British swine industry to classical swine fever. Scientific Reports, 7, (doi: 10.1038/srep42992)

Crispell, J., Zadoks, R. N., Harris, S. R., Paterson, B., Collins, D. M., de-Lisle, G. W., Livingstone, P., Neill, M. A., Biek, R., Lycett, S. J., Kao, R. R., Price-Carter, M. (2017) Using whole genome sequencing to investigate transmission in a multi-host system: bovine Tuberculosis in New Zealand. BMC Genomics, 18, (doi: 10.1186/s12864-017-3569-x)

Quintana, J.F., Babayan, S.A., Buck, A.H. (2017) Small RNAs and extracellular vesicles in filarial nematodes: from nematode development to diagnostics. Parasite Immunology, 39, (doi: 10.1111/pim.12395)

Dietrich, I., Shi, X., McFarlane, M., Watson, M., Blomström, A.-L., Skelton, J. K., Kohl, A., Elliott, R. M., Schnettler, E. (2017) The antiviral RNAi response in vector and non-vector cells against orthobunya viruses. PLoS Neglected Tropical Diseases, 11, (doi: 10.1371/journal.pntd.0005272)

Piper, E.K., Jonsson, N.N., Gondro, C., Vance, M.E., Lew-Tabor, A., Jackson, L.A. (2017) Peripheral cellular and humoral responses to the cattle tick Rhipicephalus microplus in Santa Gertrudis cattle. Parasite Immunology, 39, (doi: 10.1111/pim.12402)

Van Doren, B. M., Liedvogel, M., Helm, B. (2017) Programmed and flexible: long-term Zugunruhe data highlight the many axes of variation in avian migratory behaviour. Journal of Avian Biology, 48, pp. 155-172. (doi: 10.1111/jav.01348)

Duckett, D. G., McKee, A. J., Sutherland, L.-A., Kyle, C., Boden, L. A., Auty, H., Bessell, P. R., McKendrick, I. J. (2017) Scenario planning as communicative action: lessons from participatory exercises conducted for the Scottish livestock industry. Technological Forecasting and Social Change, 114, pp. 138-151. (doi: 10.1016/j.techfore.2016.07.034)

Mable, B.K., Hagmann, J., Kim, S.-T., Adam, A., Kilbride, E., Weigel, D., Stift, M. (2017) What causes mating system shifts in plants? Arabidopsis lyrata as a case study. Heredity, 118, pp. 52-63. (doi: 10.1038/hdy.2016.99)

Helm, B., Lincoln, G. A. (2017) Circannual rhythms anticipate the Earth’s annual periodicity. Springer India

Gu, H. Y., Marks, N. D., Winter, A. D., Weir, W., Tzelos, T., McNeilly, T. N., Britton, C., Devaney, E. (2017) Conservation of a microRNA cluster in parasitic nematodes and profiling of miRNAs in excretory-secretory products and microvesicles of Haemonchus contortus. PLoS Neglected Tropical Diseases, 11, (doi: 10.1371/journal.pntd.0006056)

Helm, B., Shavit, A. (2017) Dissecting and reconstructing time and space for replicable biological research. Yale University Press

Ndungu, N. N., Kiatoko, N., Ciosi, M., Salifu, D., Nyansera, D., Masiga, D., Raina, S. K. (2017) Identification of stingless bees (Hymenoptera: Apidae) in Kenya using Morphometrics and DNA barcoding. Journal of Apicultural Research, 56, pp. 341-353. (doi: 10.1080/00218839.2017.1327939)

Bilgiç, H. B., Karagenç, T., Bakirci, S., Eren, H., Weir, W. (2017) Loop mediated isothermal amplification (LAMP) of Theileria annulata DNA. Ankara Üniversitesi Veteriner Fakültesi Dergisi, 64, pp. 211-221. (doi: 10.1501/Vetfak_0000002801)

Mottram, T. J., Li, P., Dietrich, I., Shi, X., Brennan, B., Varjak, M., Kohl, A. (2017) Mutational analysis of Rift Valley fever phlebovirus nucleocapsid protein indicates novel conserved, functional amino acids. PLoS Neglected Tropical Diseases, 11, (doi: 10.1371/journal.pntd.0006155)

Jerem, P., Jarrett, C., Helm, B. (2017) My family and other animals: mixed broods of great and blue tits in the Loch Lomond woodlands. Glasgow Naturalist, 26,

Jarrett, C., Maillard, F., Helm, B. (2017) Seasonal trends in the temporal plasticity of breeding in blue tits and great tits in the Loch Lomond area. Glasgow Naturalist, 26,

Emami, S. N., Ranford-Cartwright, L. C., Ferguson, H. M. (2017) The transmission potential of malaria-infected mosquitoes (An.gambiae-Keele, An.arabiensis-Ifakara) is altered by the vertebrate blood type they consume during parasite development. Scientific Reports, 7, (doi: 10.1038/srep40520)

Boden, L.A., Auty, H., Sparks, N., Mellor, D.J. (2017) Veterinary Risk Assessment for Avian Influenza in the AI Outbreak in the UK.

Boden, L.A., Auty, H., Reeves, A., Bessell, P., Rydevik, G., Mckay, T., McKendrick, I.J. (2017) Year 2030: What Is the Future of Animal Surveillance in Scotland?

Myburgh, E., Ritchie, R., Goundry, A. L., O’Neill, K., Marchesi, F., Devaney, E. (2016) Attempts to image the early inflammatory response during infection with the lymphatic filarial nematode Brugia pahangi in a mouse model. PLoS ONE, 11, (doi: 10.1371/journal.pone.0168602)

Bessell, P. R., Searle, K. R., Auty, H. K., Handel, I. G., Purse, B. V., Bronsvoort, B. M. d. C. (2016) Assessing the potential for Bluetongue virus 8 to spread and vaccination strategies in Scotland. Scientific Reports, 6, (doi: 10.1038/srep38940)

Maze, M. J., Biggs, H. M., Rubach, M. P., Galloway, R. L., Cash-Goldwasser, S., Allan, K. J., Halliday, J. E.B., Hertz, J. t., Saganda, W., Lwezaula, B. F., Cleaveland, S., Mmbaga, B. T., Maro, V. P., Crump, J. A. (2016) Comparison of the estimated incidence of acute leptospirosis in the Kilimanjaro Region of Tanzania between 2007-08 and 2012-14. PLoS Neglected Tropical Diseases, 10, (doi: 10.1371/journal.pntd.0005165)

Russell, D. J.F., Hastie, G. D., Thompson, D., Janik, V. M., Hammond, P. S., Scott-Hayward, L. A.S., Matthiopoulos, J., Jones, E. L., McConnell, B. J. (2016) Avoidance of wind farms by harbour seals is limited to pile driving activities. Journal of Applied Ecology, 53, pp. 1642-1652. (doi: 10.1111/1365-2664.12678)

Davison, T. M., Jonsson, N.N., Mayer, D. G., Gaughan, J. B., Ehrlich, W. K., McGowan, M. R. (2016) Comparison of the impact of six heat-load management strategies on thermal responses and milk production of feed-pad and pasture fed dairy cows in a subtropical environment. International Journal of Biometeorology, 60, pp. 1961-1968. (doi: 10.1007/s00484-016-1183-2)

Bulla, M. et al. (2016) Unexpected diversity in socially synchronized rhythms of shorebirds. Nature, 540, pp. 109-113. (doi: 10.1038/nature20563)

Millins, C., Gilbert, L., Johnson, P., James, M., Kilbride, E., Birtles, R., Biek, R. (2016) Heterogeneity in the abundance and distribution of Ixodes ricinus and Borrelia burgdorferi (sensu lato) in Scotland: implications for risk prediction. Parasites and Vectors, 9, (doi: 10.1186/s13071-016-1875-9)

Maliti, D. V., Govella, N. J., Killeen, G. F., Mirzai, N., Johnson, P. C.D., Kreppel, K., Ferguson, H. M. (2016) Erratum to: Development and evaluation of mosquito-electrocuting traps as alternatives to the human landing catch technique for sampling host-seeking malaria vectors. Malaria Journal, 15, (doi: 10.1186/s12936-016-1562-5)

Lankester, F., Lugelo, A., Werling, D., Mnyambwa, N., Keyyu, J., Kazwala, R., Grant, D., Smith, S., Parameswaran, N., Cleaveland, S., Russell, G., Haig, D. (2016) The efficacy of alcelaphine herpesvirus-1 (AlHV-1) immunization with the adjuvants Emulsigen® and the monomeric TLR5 ligand FliC in zebu cattle against AlHV-1 malignant catarrhal fever induced by experimental virus challenge. Veterinary Microbiology, 195, pp. 144-153. (doi: 10.1016/j.vetmic.2016.09.019)

Logan, N., Dundon, W. G., Diallo, A., Baron, M. D., Nyarobi, M. J., Cleaveland, S., Keyyu, J., Fyumagwa, R., Hosie, M. J., Willett, B. J. (2016) Enhanced immunosurveillance for animal morbilliviruses using vesicular stomatitis virus (VSV) pseudotypes. Vaccine, 34, pp. 5736-5743. (doi: 10.1016/j.vaccine.2016.10.010)

Forde, T. L., Orsel, K., Zadoks, R. N., Biek, R., Adams, L. G., Checkley, S. L., Davison, T., De Buck, J., Dumon, M., Elkin, B. T., Finnegan, L., Macbeth, B. J., Nelson, C., Niptanatiak, A., Sather, S., Schwantje, H. M., van der Meer, F., Kutz, S. J. (2016) Bacterial genomics reveal the complex epidemiology of an emerging pathogen in Arctic and boreal ungulates. Frontiers in Microbiology, 7, (doi: 10.3389/fmicb.2016.01759)

Lankester, F. J., Wouters, P. A.W.M., Czupryna, A., Palmer, G. H., Mzimbiri, I., Cleaveland, S., Francis, M. J., Sutton, D. J., Sonnemans, D. G.P. (2016) Thermotolerance of an inactivated rabies vaccine for dogs. Vaccine, 34, pp. 5504-5511. (doi: 10.1016/j.vaccine.2016.10.015)

Schnettler, E., Sreenu, V. B., Mottram, T., McFarlane, M. (2016) Wolbachia restricts insect specific flavivirus infection in Aedes aegypti cells. Journal of General Virology, 97, pp. 3024-3029. (doi: 10.1099/jgv.0.000617)

Manin, B. O., Ferguson, H. M., Vythilingam, I., Fornace, K., Willilam, T., Torr, S. J., Drakeley, C., Chua, T. H. (2016) Investigating the contribution of peridomestic transmission to risk of zoonotic malaria infection in humans. PLoS Neglected Tropical Diseases, 10, (doi: 10.1371/journal.pntd.0005064)

Donald, C. L. et al. (2016) Full genome sequence and sfRNA interferon antagonist activity of Zika virus from Recife, Brazil. PLoS Neglected Tropical Diseases, 10, (doi: 10.1371/journal.pntd.0005048)

Auty, H., Cleaveland, S., Malele, I., Masoy, J., Lembo, T., Bessell, P., Torr, S., Picozzi, K., Welburn, S. C. (2016) Quantifying heterogeneity in host-vector contact: tsetse (Glossina swynnertoni and G. pallidipes) host choice in Serengeti National Park, Tanzania. PLoS ONE, 11, (doi: 10.1371/journal.pone.0161291)

Ferguson, E. A., Matthiopoulos, J., Insall, R. H., Husmeier, D. (2016) Inference of the drivers of collective movement in two cell types: Dictyostelium and melanoma. Journal of the Royal Society: Interface, 13, (doi: 10.1098/rsif.2016.0695)

Main, B. J., Lee, Y., Ferguson, H.M., Kreppel, K.S., Kihonda, A., Govella, N. J., Collier, T. J., Cornel, A.J., Eskin, E., Kang, E.Y., Nieman, C.C., Weakley, A.M., Lanzaro, G.C. (2016) The genetic basis of host preference and resting behavior in the major African malaria vector, Anopheles arabiensis. PLoS Genetics, 12, (doi: 10.1371/journal.pgen.1006303)

Govella, N. J., Maliti, D. F., Mlwale, A. T., Massallu, J. P., Mirzai, N., Johnson, P. C.D., Ferguson, H. M., Killeen, G. F. (2016) An improved mosquito electrocuting trap that safely reproduces epidemiologically relevant metrics of mosquito human-feeding behaviours as determined by human landing catch. Malaria Journal, 15, (doi: 10.1186/s12936-016-1513-1)

Goh, S., Ngugi, D., Lizundia, R., Hostettler, I., Woods, K., Ballingall, K., MacHugh, N. D., Morrison, W. I., Weir, W., Shiels, B., Werling, D. (2016) Identification of Theileria lestoquardi antigens recognized by CD8+ T cells. PLoS ONE, 11, (doi: 10.1371/journal.pone.0162571)

Wijayanti, S. P. M., Porphyre, T., Chase-Topping, M., Rainey, S. M., McFarlane, M., Schnettler, E., Biek, R., Kohl, A. (2016) The importance of socio-economic versus environmental risk factors for reported dengue cases in Java, Indonesia. PLoS Neglected Tropical Diseases, 10, (doi: 10.1371/journal.pntd.0004964)

Laing, R., Maitland, K., Lecova, L., Skuce, P. J., Tait, A., Devaney, E. (2016) Analysis of putative resistance gene loci in UK field populations of Haemonchus contortus after six years of macrocyclic lactone use. International Journal for Parasitology, 46, pp. 621-630. (doi: 10.1016/j.ijpara.2016.03.010)

Monckton, D., Ciosi, M., Mubarak, A., Cumming, S., Hamilton, G., Maxwell, A., The International-Venezuela Collaborative Research Group, -, The Scottish Myotonic Dystrophy Genetic Variation Consortium, -, The Track-On HD Research Team, - (2016) Cryptic Polyglutamine Repeat Sequence Variation and Somatic Instability in Huntington’s Disease: Drivers of Pathology? (doi: 10.1136/jnnp-2016-314597.2)

Capewell, P., Cren-Travaille, C., Marchesi, F., Johnston, P., Clucas, C., Benson, R. A., Gorman, T.-A., Calvo-Alvarez, E., Crouzols, A., Jouvion, G., Jamonneau, V., Weir, W., Stevenson, M. L., O'Neill, K., Cooper, A., Swar, N.-r. K., Bucheton, B., Ngoy, D. M., Garside, P., Rotureau, B., MacLeod, A. (2016) The skin is a significant but overlooked anatomical reservoir for vector-borne African trypanosomes. eLife, 5, (doi: 10.7554/eLife.17716)

Al-Hamidhi, S., Weir, W., Kinnaird, J., Tageledin, M., Beja-Pereira, A., Morrison, I., Thompson, J., Tait, A., Shiels, B., Babiker, H. A. (2016) Theileria lestoquardi displays reduced genetic diversity relative to sympatric Theileria annulata in Oman. Infection, Genetics and Evolution, 43, pp. 297-306. (doi: 10.1016/j.meegid.2016.05.007)

Grecian, W. J., Witt, M. J., Attrill, M. J., Bearhop, S., Becker, P. H., Egevang, C., Furness, R. W., Godley, B. J., González-Solís, J., Grémillet, D., Kopp, M., Lescroël, A., Matthiopoulos, J., Patrick, S. C., Peter, H.-U., Phillips, R. A., Stenhouse, I. J., Votier, S. C. (2016) Seabird diversity hotspot linked to ocean productivity in the Canary current large marine ecosystem. Biology Letters, 12, (doi: 10.1098/rsbl.2016.0024)

Kohl, A., Brennan, B., Weber, F. (2016) Homage to Richard M. Elliott. Viruses, 8, (doi: 10.3390/v8080224)

Cooper, A., Capewell, P., Clucas, C., Veitch, N., Weir, W., Thomson, R., Raper, J., MacLeod, A. (2016) A primate APOL1 variant that kills Trypanosoma brucei gambiense. PLoS Neglected Tropical Diseases, 10, (doi: 10.1371/journal.pntd.0004903)

Koh-Tan, H. H., Strachan, E., Cooper, K., Bell-Sakyi, L., Jonsson, N. N. (2016) Identification of a novel ß-adrenergic octopamine receptor-like gene (ßAOR-like) and increased ATP-binding cassette B10 (ABCB10) expression in a Rhipicephalus microplus cell line derived from acaricide-resistant ticks. Parasites and Vectors, 9, (doi: 10.1186/s13071-016-1708-x)

Blackburn, S., Hopcraft, J. G. C., Ogutu, J. O., Matthiopoulos, J., Frank, L., Singh, N. (2016) Human-wildlife conflict, benefit sharing and the survival of lions in pastoralist community-based conservancies. Journal of Applied Ecology, 53, pp. 1195-1205. (doi: 10.1111/1365-2664.12632)

Gomes, J., Salgueiro, P., Inácio, J., Amaro, A., Pinto, J., Tait, A., Shiels, B., Pereira da Fonseca, I., Santos-Gomes, G., Weir, W. (2016) Population diversity of Theileria annulata in Portugal. Infection, Genetics and Evolution, 42, pp. 14-19. (doi: 10.1016/j.meegid.2016.04.023)

Melville, C. A., Johnson, P. C. D., Smiley, E., Simpson, N., Purves, D., McConnachie, A., Cooper, S.-A. (2016) Problem behaviours and symptom dimensions of psychiatric disorders in adults with intellectual disabilities: An exploratory and confirmatory factor analysis. Research in Developmental Disabilities, 55, pp. 1-13. (doi: 10.1016/j.ridd.2016.03.007)

Auty, H., Morrison, L. J., Torr, S. J., Lord, J. (2016) Transmission dynamics of Rhodesian sleeping sickness at the interface of wildlife and livestock areas. Trends in Parasitology, 32, pp. 608-621. (doi: 10.1016/j.pt.2016.05.003)

Horswill, C., Ratcliffe, N., Green, J.A., Phillips, R.A., Trathan, P.N., Matthiopoulos, J. (2016) Unravelling the relative roles of top-down and bottom-up forces driving population change in an oceanic predator. Ecology, 97, pp. 1919-1928. (doi: 10.1002/ecy.1452)

Rysava, K., McGill, R.A.R., Matthiopoulos, J., Hopcraft, J.G.C. (2016) Re-constructing nutritional history of Serengeti wildebeest from stable isotopes in tail hair: seasonal starvation patterns in an obligate grazer. Rapid Communications in Mass Spectrometry, 130, pp. 1461-1468. (doi: 10.1002/rcm.7572)

Hemmink, J. D., Weir, W., MacHugh, N. D., Graham, S. P., Patel, E., Paxton, E., Shiels, B., Toye, P. G., Morrison, W. I., Pelle, R. (2016) Limited genetic and antigenic diversity within parasite isolates used in a live vaccine against Theileria parva. International Journal for Parasitology, 46, pp. 495-506. (doi: 10.1016/j.ijpara.2016.02.007)

Melville, C.A., Johnson, P.C.D., Smiley, E., Simpson, N., McConnachie, A., Purves, D., Osugo, M., Cooper, S.-A. (2016) Statistical modelling studies examining the dimensional structure of psychopathology experienced by adults with intellectual disabilities: Systematic review. Research in Developmental Disabilities, 53-54, pp. 1-10. (doi: 10.1016/j.ridd.2016.01.018)

Pingen, M., Bryden, S. R., Pondeville, E., Schnettler, E., Kohl, A., Merits, A., Fazakerley, J. K., Graham, G. J., McKimmie, C. S. (2016) Host inflammatory response to mosquito bites enhances the severity of arbovirus infection. Immunity, 44, pp. 1455-1469. (doi: 10.1016/j.immuni.2016.06.002)

Bakker, K. M., Martinez-Bakker, M. E., Helm, B., Stevenson, T. J. (2016) Digital epidemiology reveals global childhood disease seasonality and the effects of immunization. Proceedings of the National Academy of Sciences of the United States of America, 113, pp. 6689-6694. (doi: 10.1073/pnas.1523941113)

Forde, T., Biek, R., Zadoks, R., Workentine, M. L., De Buck, J., Kutz, S., Opriessnig, T., Trewby, H., van der Meer, F., Orsel, K. (2016) Genomic analysis of the multi-host pathogen Erysipelothrix rhusiopathiae reveals extensive recombination as well as the existence of three generalist clades with wide geographic distribution. BMC Genomics, 17, (doi: 10.1186/s12864-016-2643-0)

Overend, G., Luo, Y., Henderson, L., Douglas, A. E., Davies, S. A., Dow, J. A.T. (2016) Molecular mechanism and functional significance of acid generation in the Drosophila midgut. Scientific Reports, 6, (doi: 10.1038/srep27242)

Bilgic, H. B., Karagenc, T., Bakırc, S., Shiels, B., Tait, A., Kinnaird, J., Eren, H., Weir, W. (2016) Identification and analysis of immunodominant antigens for ELISA-based detection of Theileria annulata. PLoS ONE, 11, (doi: 10.1371/journal.pone.0156645)

Viana, M., Shirima, G. M., John, K. S., Fitzpatrick, J., Kazwala, R. R., Buza, J. J., Cleaveland, S., Haydon, D. T., Halliday, J. (2016) Integrating serological and genetic data to quantify cross-species transmission: brucellosis as a case study. Parasitology, 143, pp. 821-834. (doi: 10.1017/S0031182016000044)

Isaac, C., Ciosi, M., Hamilton, A., Scullion, K. M., Dede, P., Igbinosa, I. B., Nmorsi, O. P. G., Masiga, D., Turner, C. M. R. (2016) Molecular identification of different trypanosome species and subspecies in tsetse flies of northern Nigeria. Parasites and Vectors, 9, (doi: 10.1186/s13071-016-1585-3)

Reynolds, A., Lindstrom, J., Johnson, P. C.D., Mable, B. K. (2016) Evolution of drug-tolerant nematode populations in response to density reduction. Evolutionary Applications, 9, pp. 726-738. (doi: 10.1111/eva.12376)

Shaw, W. R., Marcenac, P., Childs, L. M., Buckee, C. O., Baldini, F., Sawadogo, S. P., Dabire, R. K., Diabaté, A., Catteruccia, F. (2016) Wolbachia infections in natural Anopheles populations affect egg laying and negatively correlate with Plasmodium development. Nature Communications, 7, (doi: 10.1038/ncomms11772)

Buckley, J., Kilbride, E., Cevik, V., Vicente, J. G., Holub, E. B., Mable, B. K. (2016) R-gene variation across Arabidopsis lyrata subspecies: effects of population structure, selection and mating system. BMC Evolutionary Biology, 16, (doi: 10.1186/s12862-016-0665-5)

Paton, R. S., Matthiopoulos, J. (2016) Defining the scale of habitat availability for models of habitat selection. Ecology, 97, pp. 1113-1122. (doi: 10.1890/14-2241.1)

Segata, N., Baldini, F., Pompon, J., Garrett, W. S., TinTruong, D., Dabiré, R. K., Diabaté, A., Levashina, E., Catteruccia, F. (2016) The reproductive tracts of two malaria vectors are populated by a core microbiome and by gender- and swarm-enriched microbial biomarkers. Scientific Reports, 6, (doi: 10.1038/srep24207)

Halberg, K. A., Rainey, S. M., Veland, I. R., Neuert, H., Dornan, A. J., Klämbt, C., Davies, S.-A., Dow, J. A.T. (2016) The cell adhesion molecule Fasciclin2 regulates brush border length and organization in Drosophila renal tubules. Nature Communications, 7, (doi: 10.1038/ncomms11266)

Mtema, Z. et al. (2016) Mobile phones as surveillance tools: implementing and evaluating a large-scale intersectoral surveillance system for rabies in Tanzania. PLoS Medicine, 13, (doi: 10.1371/journal.pmed.1002002)

Brock, P. M., Fornace, K. M., Parmiter, M., Cox, J., Drakeley, C. J., Ferguson, H. M., Kao, R. R. (2016) Plasmodium knowlesi transmission: integrating quantitative approaches from epidemiology and ecology to understand malaria as a zoonosis. Parasitology, 143, pp. 389-400. (doi: 10.1017/S0031182015001821)

Rainey, S. M., Martinez, J., McFarlane, M., Juneja, P., Sarkies, P., Lulla, A., Schnettler, E., Varjak, M., Merits, A., Miska, E. A., Jiggins, F. M., Kohl, A. (2016) Wolbachia blocks viral genome replication early in infection without a transcriptional response by the endosymbiont or host small RNA pathways. PLoS Pathogens, 12, (doi: 10.1371/journal.ppat.1005536)

Zhang, H. L., Mnzava, K. W., Mitchell, S. T., Melubo, M. L., Kibona, T. J., Cleaveland, S., Kazwala, R. R., Crump, J. A., Sharp, J. P., Halliday, J. E.B. (2016) Mixed methods survey of zoonotic disease awareness and practice among animal and human healthcare providers in Moshi, Tanzania. PLoS Neglected Tropical Diseases, 10, (doi: 10.1371/journal.pntd.0004476)

Patakas, A., Ji, R., Weir, W., Connolly, S. E., Benson, R. A., Nadler, S. G., Brewer, J. M., McInnes, I. B., Garside, P. (2016) Abatacept inhibits T cell priming by inducing of a unique transcriptional profile that reduces their ability to activate antigen presenting cells. Arthritis and Rheumatology, 68, pp. 627-638. (doi: 10.1002/art.39470)

Clarke, A. T., Johnson, P. C.D., Hall, G. C., Ford, I., Mills, P. (2016) High dose atorvastatin associated with increased risk of significant hepatotoxicity in comparison to simvastatin in UK GPRD cohort. PLoS ONE, 11, (doi: 10.1371/journal.pone.0151587)

Trewby, H., Wright, D., Breadon, E. L., Lycett, S. J., Mallon, T. R., McCormick, C., Johnson, P., Orton, R. J., Allen, A. R., Galbraith, J., Herzyk, P., Skuce, R. A., Biek, R., Kao, R. R. (2016) Use of bacterial whole-genome sequencing to investigate local persistence and spread in bovine tuberculosis. Epidemics, 14, pp. 26-35. (doi: 10.1016/j.epidem.2015.08.003)

Sarker, S. K., Reeve, R., Thompson, J., Paul, N. K., Matthiopoulos, J. (2016) Are we failing to protect threatened mangroves in the Sundarbans world heritage ecosystem? Scientific Reports, 6, (doi: 10.1038/srep21234)

Hammer, S., Nager, R.G., Johnson, P.C.D., Furness, R.W., Provencher, J.F. (2016) Plastic debris in great skua (Stercorarius skua) pellets corresponds to seabird prey species. Marine Pollution Bulletin, 103, pp. 206-210. (doi: 10.1016/j.marpolbul.2015.12.018)

Hover, S., King, B., Hall, B., Loundras, E.-A., Taqi, H., Daly, J., Dallas, M., Peers, C., Schnettler, E., McKimmie, C., Kohl, A., Barr, J. N., Mankouri, J. (2016) Modulation of potassium channels inhibits bunyavirus infection. Journal of Biological Chemistry, 291, pp. 3411-3422. (doi: 10.1074/jbc.M115.692673)

Logan, N., McMonagle, E., Drew, A. A., Takahashi, E., McDonald, M., Baron, M., Gilbert, M., Cleaveland, S., Haydon, D. T., Hosie, M. J., Willett, B. (2016) Efficient generation of vesicular stomatitis 1 virus (VSV)-pseudotypes bearing morbilliviral glycoproteins and their use in quantifying virus neutralising antibodies. Vaccine, 34, pp. 814-822. (doi: 10.1016/j.vaccine.2015.12.006)

Porphyre, T., Boden, L. A., Correia-Gomes, C., Auty, H. K., Gunn, G. J., Woolhouse, M. E. J. (2016) Using national movement databases to help inform responses to swine disease outbreaks in Scotland: the impact of uncertainty around incursion time. Scientific Reports, 6, (doi: 10.1038/srep20258)

Lankester, F., Russell, G.C., Lugelo, A., Ndabigayec, A., Mnyambwac, N., Keyyu, J., Kazwala, R., Grant, D., Percival, A., Deane, D., Haig, D.M., Cleaveland, S. (2016) A field vaccine trial in Tanzania demonstrates partial protection against malignant catarrhal fever in cattle. Vaccine, 34, pp. 831-838. (doi: 10.1016/j.vaccine.2015.12.009)

Carletti, T., Barreto, C., Mesplet, M., Mira, A., Weir, W., Shiels, B., Oliva, A. G., Schnittger, L., Florin-Christensen, M. (2016) Characterization of a papain-like cysteine protease essential for the survival of Babesia ovis merozoites. Ticks and Tick-borne Diseases, 7, pp. 85-93. (doi: 10.1016/j.ttbdis.2015.09.002)

Ahlstrom, C., Barkema, H. W., Stevenson, K., Zadoks, R. N., Biek, R., Kao, R., Trewby, H., Haupstein, D., Kelton, D. F., Fecteau, G., Labrecque, O., Keefe, G. P., McKenna, S. L. B., Tahlan, K., De Buck, J. (2016) Genome-wide diversity and phylogeography of mycobacterium avium subsp. paratuberculosis in Canadian dairy cattle. PLoS ONE, 11, (doi: 10.1371/journal.pone.0149017)

Maliti, D.V., Marsden, C.D., Main, B.J., Govella, N.J., Yamasaki, Y., Collier, T.C., Kreppel, K., Chiu, J.C., Lanzaro, G.C., Ferguson, H.M., Lee, Y. (2016) Investigating associations between biting time in the malaria vector Anopheles arabiensis Patton and single nucleotide polymorphisms in circadian clock genes: support for sub-structure among An. arabiensis in the Kilombero valley of Tanzania. Parasites and Vectors, 9, (doi: 10.1186/s13071-016-1394-8)

Gatherer, D., Kohl, A. (2016) Zika virus: a previously slow pandemic spreads rapidly through the Americas. Journal of General Virology, 97, pp. 269-273. (doi: 10.1099/jgv.0.000381)

Bilsland, E., Bean, D. M., Devaney, E., Oliver, S. G. (2016) Yeast-based high-throughput screens to identify novel compounds active against Brugia malayi. PLoS Neglected Tropical Diseases, 10, (doi: 10.1371/journal.pntd.0004401)

Horswill, C., Matthiopoulos, J., Ratcliffe, N., Green, J. A., Trathan, P. N., McGill, R.A.R., Phillips, R. A., O’Connell, T. C. (2016) Drivers of intrapopulation variation in resource use in a generalist predator, the macaroni penguin. Marine Ecology Progress Series, 548, pp. 233-247. (doi: 10.3354/meps11626)

Davies, G.M., Domenech-Jardi, R., Gray, A., Johnson, P.C.D. (2016) Vegetation structure and fire weather influence variation in burn severity and fuel consumption during peatland wildfires. Biogeosciences, 13, pp. 389-398. (doi: 10.5194/bg-13-389-2016)

Unckless, R. L., Howick, V. M., Lazzaro, B. P. (2016) Convergent balancing selection on an antimicrobial peptide in Drosophila. Current Biology, 26, pp. 257-262. (doi: 10.1016/j.cub.2015.11.063)

Thomson, S., Innes, E. A., Jonsson, N. N., Katzer, F. (2016) A multiplex PCR test to identify four common cattle-adapted Cryptosporidium species. Parasitology Open, 2, (doi: 10.1017/pao.2016.2)

McFarlane, M., Kohl, A. (2016) Alphaviruses and their role in elucidating antiviral responses in mosquitoes. Caister Academic Press

Beyer, H. L., Gurarie, E., Börger, L., Panzacchi, M., Basille, M., Herfindal, I., Van Moorter, B., R. Lele, S., Matthiopoulos, J., Fryxell, J. (2016) ‘You shall not pass!’: quantifying barrier permeability and proximity avoidance by animals. Journal of Animal Ecology, 85, pp. 43-53. (doi: 10.1111/1365-2656.12275)

Kohl, A., Pondeville, E., Schnettler, E., Crisanti, A., Supparo, C., Christophides, G. K., Kersey, P. J., Maslen, G. L., Takken, W., Koenraadt, C. J.M., Oliva, C. F., Busquets, N., Abad, F. X., Failloux, A.-B., Levashina, E. A., Wilson, A. J., Veronesi, E., Pichard, M., Marsh, S. A., Simard, F., Vernick, K. D. (2016) Advancing vector biology research: a community survey for future directions, research applications and infrastructure requirements. Pathogens and Global Health, 110, pp. 164-172. (doi: 10.1080/20477724.2016.1211475)

Murray, J.M.D., Crow, J., Mable, B. (2016) Avatars in Assessment: On-campus student Presentations in a Virtual World.

Viana, M., Hughes, A., Matthiopoulos, J., Ranson, H., Ferguson, H. M. (2016) Delayed mortality effects cut the malaria transmission potential of insecticide resistant mosquitoes. Proceedings of the National Academy of Sciences of the United States of America, 113, pp. 8975-8980. (doi: 10.1073/pnas.1603431113)

Wijayanti, S. P. M., Sunaryo, S., Suprihatin, S., McFarlane, M., Rainey, S. M., Dietrich, I., Schnettler, E., Biek, R., Kohl, A. (2016) Dengue in Java, Indonesia: relevance of mosquito indices as risk predictors. PLoS Neglected Tropical Diseases, 10, (doi: 10.1371/journal.pntd.0004500)

MacEachern, K.E., Verreynne, F.J., Jonsson, N.N. (2016) Experiential Learning Through Field Exercises in the Veterinary Final Year Elective on Wildlife Management.

Devaney, E., Gillan, V. (2016) Hsp90 inhibitors in parasitic nematodes: prospects and challenges. Current Topics in Medicinal Chemistry, 16, pp. 2805-2811. (doi: 10.2174/1568026616666160413140502)

Ferguson, H., Govella, N., Maliti, B., Mirzal, N., Kreppel, K. (2016) Insect trap.

Weir, W., Capewell, P., Foth, B., Clucas, C., Pountain, A., Steketee, P., Veitch, N., Koffi, M., De Meeûs, T., Kaboré, J., Camara, M., Cooper, A., Tait, A., Jamonneau, V., Bucheton, B., Berriman, M., MacLeod, A. (2016) Population genomics reveals the origin and asexual evolution of human infective trypanosomes. eLife, 5, (doi: 10.7554/eLife.11473)

Landry, G. M., Hirata, T., Anderson, J. B., Cabrero, P., Gallo, C. J.R., Dow, J. A.T., Romero, M. F. (2016) Sulfate and thiosulfate inhibit oxalate transport via a dPrestin(mSlc26a6)-dependent mechanism in an insect model of calcium oxalate nephrolithiasis. American Journal of Physiology: Renal Physiology, 310, pp. F152-F159. (doi: 10.1152/ajprenal.00406.2015)

Cannell, E., Dornan, A. J., Halberg, K. A., Terhzaza, S., Dow, J. A.T., Davies, S. A. (2016) The corticotropin-releasing factor-like diuretic hormone 44 (DH44) and kinin neuropeptides modulate desiccation and starvation tolerance in Drosophila melanogaster. Peptides, 80, (doi: 10.1016/j.peptides.2016.02.004)

Gill, M. S., Lemey, P., Bennett, S. N., Biek, R., Suchard, M. A. (2016) Understanding past population dynamics: Bayesian coalescent-based modeling with covariates. Systematic Biology, 65, pp. 1041-1056. (doi: 10.1093/sysbio/syw050)

Ndiaye, E. H., Gamou, F., Alioune, G., Bob Ndeye, S., Cheikh, T., Diagne, C. T., Diallo, D., Yamar, B.A., Dia, I., Kohl, A., Sall, A. A., Diallo, M. (2016) Vector competence of Aedes vexans (Meigen), Culex poicilipes (Theobald) and Cx. quinquefasciatus Say from Senegal for West and East African lineages of Rift Valley fever virus. Parasites and Vectors, 9, (doi: 10.1186/s13071-016-1383-y)

MacMillan, H. A., Andersen, J. L., Davies, S. A., Overgaard, J. (2015) The capacity to maintain ion and water homeostasis underlies interspecific variation in Drosophila cold tolerance. Scientific Reports, 5, (doi: 10.1038/srep18607)

Ferguson, E., Hampson, K., Cleaveland, S., Consunji, R., Deray, R., Friar, J., Haydon, D. T., Jimenez, J., Pancipane, M., Townsend, S. E. (2015) Heterogeneity in the spread and control of infectious disease: consequences for the elimination of canine rabies. Scientific Reports, 5, (doi: 10.1038/srep18232)

Overend, G., Cabrero, P., Halberg, K. A.,, Ranford-Cartwright, L. C., Woods, D., Davies, S. A., Dow, J. A.T. (2015) A comprehensive transcriptomic view of renal function in the malaria vector, Anopheles gambiae. Insect Biochemistry and Molecular Biology, 67, pp. 47-58. (doi: 10.1016/j.ibmb.2015.05.007)

Terhzaz, S., Cabrero, P., Brinzer, R. A., Halberg, K. A., Dow, J. A.T., Davies, S.-A. (2015) A novel role of Drosophila cytochrome P450-4e3 in permethrin insecticide tolerance. Insect Biochemistry and Molecular Biology, 67, pp. 38-46. (doi: 10.1016/j.ibmb.2015.06.002)

Brinzer, R., Henderson, L., Marchiondo, A. A., Woods, D. J., Davies, S., Dow, J. A. T. (2015) Metabolomic profiling of permethrin-treated Drosophila melanogaster identifies a role for tryptophan catabolism in insecticide survival. Insect Biochemistry and Molecular Biology, 67, pp. 74-86. (doi: 10.1016/j.ibmb.2015.09.009)

Bishop, R.P., Hemmink, J.D., Morrison, W.I., Weir, W., Toye, P.G., Sitt, T., Spooner, P.R., Musoke, A.J., Skilton, R.A., Odongo, D.O. (2015) The African buffalo parasite Theileria. sp. (buffalo) can infect and immortalize cattle leukocytes and encodes divergent orthologues of Theileria parva antigen genes. International Journal for Parasitology: Parasites and Wildlife, 4, pp. 333-342. (doi: 10.1016/j.ijppaw.2015.08.006)

Dow, J. A. T., Davies, S. A. (2015) What is an epitheliome, anyway? Insect Biochemistry and Molecular Biology, 67, pp. 1. (doi: 10.1016/j.ibmb.2015.10.013)

Mellanby, R.J., Price, J., Wooldridge, L., Jonsson, N.N., Clegg, P.D., Emes, R.D., England, G., Corr, S.A., Piercy, R.J., Mulcahy, G., Wood, J.L., Walker, B.R., Argyle, D.J. (2015) Clinical research: developing an appropriate career structure. Veterinary Record, 177, pp. 544-547. (doi: 10.1136/vr.h6169)

Tinsley, R. C., Stott, L. C., Viney, M. E., Mable, B., Tinsley, M. C. (2015) Extinction of an introduced warm-climate alien species, Xenopus laevis, by extreme weather events. Biological Invasions, 17, pp. 3183-3195. (doi: 10.1007/s10530-015-0944-x)

Russell, D. J. F., McClintock, B. T., Matthiopoulos, J., Thompson, P. M., Thompson, D., Hammond, P. S., Jones, E. L., MacKenzie, M. L., Moss, S., McConnell, B. J. (2015) Intrinsic and extrinsic drivers of activity budgets in sympatric grey and harbour seals. Oikos, 124, pp. 1462-1472. (doi: 10.1111/oik.01810)

McNaughton, A. L., Cameron, I. D., Wignall-Fleming, E. B., Biek, R., McLauchlan, J., Gunson, R. N., Templeton, K., Tan, H. M.-L., McWilliam Leitch, E. C. (2015) Spatiotemporal reconstruction of the introduction of hepatitis C virus into Scotland and its subsequent regional transmission. Journal of Virology, 89, pp. 11223-11232. (doi: 10.1128/JVI.02106-15)

Koffi, M., De Meeûs, T., Séré, M., Bucheton, B., Simo, G., Njiokou, F., Salim, B., Kaboré, J., MacLeod, A., Camara, M., Solano, P., Belem, A. M. G., Jamonneau, V. (2015) Population genetics and reproductive strategies of African Trypanosomes: revisiting available published data. PLoS Neglected Tropical Diseases, 9, (doi: 10.1371/journal.pntd.0003985)

Malzer, I., Helm, B. (2015) The seasonal dynamics of artificial nest predation rates along edges in a mosaic managed reedbed. PLoS ONE, 10, (doi: 10.1371/journal.pone.0140247)

Hotchkiss, E. J., Gilray, J. A., Brennan, M. L., Christley, R. M., Morrison, L. J., Jonsson, N. N., Innes, E. A., Katzer, F. (2015) Development of a framework for genotyping bovine-derived cryptosporidium parvum, using a multilocus fragment typing tool. Parasites and Vectors, 8, (doi: 10.1186/s13071-015-1107-8)

Boden, L. A., Auty, H., Bessell, P., Duckett, D., Liu, J., Kyle, C., McKee, A., Sutherland, L.-A., Reynolds, J., Bronsvoort, B. M.d., McKendrick, I. J. (2015) Scenario planning: the future of the cattle and sheep industries in Scotland and their resiliency to disease. Preventive Veterinary Medicine, 121, pp. 353-364. (doi: 10.1016/j.prevetmed.2015.08.012)

Mable, B. K., Kilbride, E., Viney, M. E., Tinsley, R. C. (2015) Copy number variation and genetic diversity of MHC Class IIb alleles in an alien population of Xenopus laevis. Immunogenetics, 67, pp. 591-603. (doi: 10.1007/s00251-015-0860-3)

Dridi, M., Lecollinet, S., Orton, R., Johnson, P., Rosseel, T., van Borm, S., Lambrecht, B., Muylkens, B. (2015) Next generation sequencing shows West Nile virus quasispecies diversification after a single passage in a carrion crow (Corvus corone) in vivo infection model. Journal of General Virology, 96, pp. 2999-2999. (doi: 10.1099/jgv.0.000231)

Muir, A. P., Kilbride, E., Mable, B. (2015) Spatial variation in species composition of Saprolegnia, a parasitic oomycete of amphibian eggs, in Scotland. Herpetological Journal, 25, pp. 257-263.

Johnson, P. C.D., McAulay, K. A., Montgomery, D., Lake, A., Shield, L., Gallagher, A., Little, A.-M., Shah, A., Marsh, S. G.E., Taylor, G. M., Jarrett, R. F. (2015) Modeling HLA associations with EBV-positive and -negative Hodgkin lymphoma suggests distinct mechanisms in disease pathogenesis. International Journal of Cancer, 137, pp. 1066-1075. (doi: 10.1002/ijc.29467)

Morger, J., Råberg, L., Hille, S. M., Helsen, S., Štefka, J., Al-Sabi, M. M., Kapel, C. M. O., Mappes, T., Essbauer, S., Ulrich, R. G., Bartolommei, P., Mortelliti, A., Balčiauskas, L., van den Brink, N. W., Rémy, A., Bajer, A., Cheprakov, M., Korva, M., García-Pérez, A. L., Biek, R., Withenshaw, S., Tschirren, B. (2015) Distinct haplotype structure at the innate immune receptor Toll-like receptor 2 across bank vole populations and lineages in Europe. Biological Journal of the Linnean Society, 116, pp. 124-133. (doi: 10.1111/bij.12593)

Huon, M., Jones, E. L., Matthiopoulos, J., McConnell, B., Caurant, F., Vincent, C. (2015) Habitat selection of gray seals (Halichoerus grypus) in a marine protected area in France. Journal of Wildlife Management, 79, pp. 1091-1100. (doi: 10.1002/jwmg.929)

Freer, J. J., Mable, B. K., Clucas, G., Rogers, A. D., Polito, M. J., Dunn, M., Naveen, R., Levy, H., Hart, T. (2015) Limited genetic differentiation among chinstrap penguin (Pygoscelis antarctica) colonies in the Scotia Arc and Western Antarctic Peninsula. Polar Biology, 38, pp. 1493-1502. (doi: 10.1007/s00300-015-1711-2)

Chintapalli, V. R., Kato, A., Henderson, L., Hirata, T., Woods, D. J., Overend, G., Davies, S. A., Romero, M. F., Dow, J. A. T. (2015) Transport proteins NHA1 and NHA2 are essential for survival, but have distinct transport modalities. Proceedings of the National Academy of Sciences of the United States of America, 112, pp. 11720-11725. (doi: 10.1073/pnas.1508031112)

Britton, C., Winter, A. D., Marks, N. D., Gu, H., McNeilly, T. N., Gillan, V., Devaney, E. (2015) Application of small RNA technology for improved control of parasitic helminths. Veterinary Parasitology, 212, pp. 47-53. (doi: 10.1016/j.vetpar.2015.06.003)

Morters, M.K., McNabb, S., Horton, D.L., Fooks, A.R., Schoeman, J.P., Whay, H.R., Wood, J.L.N., Cleaveland, S. (2015) Effective vaccination against rabies in puppies in rabies endemic regions. Veterinary Record, 177, (doi: 10.1136/vr.102975)

Pieszko, M., Weir, W., Goodhead, I., Kinnaird, J., Shiels, B. (2015) ApiAP2 factors as candidate regulators of stochastic commitment to merozoite production in Theileria annulata. PLoS Neglected Tropical Diseases, 9, (doi: 10.1371/journal.pntd.0003933)

Auty, H.,, Torr, S.J., Michoel, T., Jayaraman, S., Morrison, L.J. (2015) Cattle trypanosomosis: the diversity of trypanosomes and implications for disease epidemiology and control. Revue scientifique et technique (International Office of Epizootics), 34, pp. 587-598. (doi: 10.20506/rst.34.2.2382)

Matthiopoulos, J., Fieberg, J., Aarts, G., Beyer, H. L., Morales, J. M., Haydon, D. T. (2015) Establishing the link between habitat selection and animal population dynamics. Ecological Monographs, 85, pp. 413-436. (doi: 10.1890/14-2244.1)

Brennan, B. et al. (2015) In memoriam – Richard M. Elliott (1954–2015) Journal of General Virology, 96, pp. 1975-1978. (doi: 10.1099/jgv.0.000241)

Barraquand, F., New, L.F., Redpath, S., Matthiopoulos, J. (2015) Indirect effects of primary prey population dynamics on alternative prey. Theoretical Population Biology, 103, pp. 44-59. (doi: 10.1016/j.tpb.2015.04.002)

Nomikou, K., Hughes, J., Wash, R., Kellam, P., Breard, E., Zientara, S., Palmarini, M., Biek, R., Mertens, P. (2015) Widespread reassortment shapes the evolution and epidemiology of bluetongue virus following European invasion. PLoS Pathogens, 11, (doi: 10.1371/journal.ppat.1005056)

Photopoulou, T., Fedak, M. A., Matthiopoulos, J., McConnell, B., Lovell, P. (2015) The generalized data management and collection protocol for Conductivity-Temperature-Depth Satellite Relay Data Loggers. Animal Biotelemetry, 3, (doi: 10.1186/s40317-015-0053-8)

Millins, C., Magierecka, A., Gilbert, L., Edoff, A., Brereton, A., Kilbride, E., Denwood, M., Birtles, R., Biek, R. (2015) An invasive mammal (the gray squirrel, Sciurus carolinensis) commonly hosts diverse and atypical genotypes of the zoonotic pathogen Borrelia burgdorferi sensu lato. Applied and Environmental Microbiology, 81, pp. 4236-4245. (doi: 10.1128/AEM.00109-15)

Gilbert, M., Soutyrina, S. V., Seryodkin, I. V., Sulikhan, N., Uphyrkina, O. V., Goncharuk, M., Matthews, L., Cleaveland, S., Miquelle, D. G. (2015) Canine distemper virus as a threat to wild tigers in Russia and across their range. Integrative Zoology, 10, pp. 329-343. (doi: 10.1111/1749-4877.12137)

McFarlane, M., MacDonald, A. I., Stevenson, A., Graham, S. V. (2015) Human papillomavirus type 16 oncoprotein expression is controlled by the cellular splicing factor SRSF2 (SC35). Journal of Virology, 89, pp. 5276-5287. (doi: 10.1128/JVI.03434-14)

Biek, R., Pybus, O. G., Lloyd-Smith, J. O., Didelot, X. (2015) Measurably evolving pathogens in the genomic era. Trends in Ecology and Evolution, 30, pp. 306-313. (doi: 10.1016/j.tree.2015.03.009)

Martinez-Bakker, M., Helm, B. (2015) The influence of biological rhythms on host–parasite interactions. Trends in Ecology and Evolution, 30, pp. 314-326. (doi: 10.1016/j.tree.2015.03.012)

Kaewmongkol, S., Kaewmongkol, G., Inthong, N., Lakkitjaroen, N., Sirinarumitr, T., Berry, C.M., Jonsson, N.N., Stich, R.W., Jittapalapong, S. (2015) Variation among Bm86 sequences in Rhipicephalus (Boophilus) microplus ticks collected from cattle across Thailand. Experimental and Applied Acarology, 66, pp. 247-256. (doi: 10.1007/s10493-015-9897-0)

Bühlmann, M., Walrad, P., Rico, E., Ivens, A., Capewell, P., Naguleswaran, A., Roditi, I., Matthews, K. R. (2015) NMD3 regulates both mRNA and rRNA nuclear export in African trypanosomes via an XPOI-linked pathway. Nucleic Acids Research, 43, pp. 4491-4504. (doi: 10.1093/nar/gkv330)

Lankester, F., Lugelo, A., Mnyambwa, N., Ndabigaye, A., Keyyu, J., Kazwala, R., Grant, D. M., Relf, V., Haig, D. M., Cleaveland, S., Russell, G. C. (2015) Alcelaphine herpesvirus-1 (malignant catarrhal fever virus) in wildebeest placenta: genetic variation of ORF50 and A9.5 alleles. PLoS ONE, 10, (doi: 10.1371/journal.pone.0124121)

Blomström, A.-L., Gu, Q., Barry, G., Wilkie, G., Skelton, J. K., Baird, M., McFarlane, M., Schnettler, E., Elliott, R., Palmarini, M., Kohl, A. (2015) Transcriptome analysis reveals the host response to Schmallenberg virus in bovine cells and antagonistic effects of the NSs protein. BMC Genomics, 16, (doi: 10.1186/s12864-015-1538-9)

Muir, G., Ruiz-Duarte, P., Hohmann, N., Mable, B. K., Novikova, P., Schmickl, R., Guggisberg, A., Koch, M. A. (2015) Exogenous selection rather than cytonuclear incompatibilities shapes asymmetrical fitness of reciprocal Arabidopsis hybrids. Ecology and Evolution, 5, pp. 1734-1745. (doi: 10.1002/ece3.1474)

Beczkowski, P. M., Hughes, J., Biek, R., Litster, A., Willett, B. J., Hosie, M. J. (2015) Rapid evolution of the env gene leader sequence in cats naturally infected with feline immunodeficiency virus (FIV) Journal of General Virology, 96, pp. 893-903. (doi: 10.1099/vir.0.000035)

Meredith, A.L., Cleaveland, S.C., Brown, J., Mahajan, A., Shaw, D.J. (2015) Seroprevalence of encephalitozoon cuniculiin wild rodents, foxes and domestic cats in three sites in the United Kingdom. Transboundary and Emerging Diseases, 62, pp. 148-156. (doi: 10.1111/tbed.12091)

Acosta-Jamett, G., Cunningham, A.A., Bronsvoort, B.M. d., Cleaveland, S. (2015) Serosurvey of canine distemper virus and canine parvovirus in wild canids and domestic dogs at the rural interface in the Coquimbo Region, Chile. European Journal of Wildlife Research, 61, pp. 329-332. (doi: 10.1007/s10344-014-0886-0)

Halberg, K., Terhzaz, S., Cabrero, P., Davies, S. A., Dow, J. A.T. (2015) Tracing the evolutionary origins of insect renal function. Nature Communications, 6, (doi: 10.1038/ncomms7800)

García Molinos, J., Viana, M., Brennan, M., Donohue, I. (2015) Importance of long-term cycles for predicting water level dynamics in natural lakes. PLoS ONE, 10, (doi: 10.1371/journal.pone.0119253)

Ahlstrom, C., Barkema, H. W., Stevenson, K., Zadoks, R. N., Biek, R., Kao, R., Trewby, H., Haupstein, D., Kelton, D. F., Fecteau, G., Labrecque, O., Keefe, G. P., McKenna, S. L. B., De Buck, J. (2015) Limitations of variable number of tandem repeat typing identified through whole genome sequencing of Mycobacterium avium subsp. paratuberculosis on a national and herd level. BMC Genomics, 16, (doi: 10.1186/s12864-015-1387-6)

Terhzaz, S., Teets, N., Cabrero, P., Henderson, L., Richie, M. G., Nachman, R. J., Dow, J. A. T., Denlinger, D. L., Davies, S.-A. (2015) The insect capa neuropeptides impact desiccation and cold tolerance. Proceedings of the National Academy of Sciences of the United States of America, 112, pp. 2882-2887. (doi: 10.1073/pnas.1501518112)

Photopoulou, T., Lovell, P., Fedak, M. A., Thomas, L., Matthiopoulos, J., Börger, L. (2015) Efficient abstracting of dive profiles using a broken-stick model. Methods in Ecology and Evolution, 6, pp. 278-288. (doi: 10.1111/2041-210X.12328)

Pyana, P. P., Sere, M., Kaboré, J., De Meeûs, T., MacLeod, A., Bucheton, B., Van Reet, N., Büscher, P., Belem, A. M. G., Jamonneau, V. (2015) Population genetics of Trypanosoma brucei gambiense in sleeping sickness patients with treatment failures in the focus of Mbuji-Mayi, Democratic Republic of the Congo. Infection, Genetics and Evolution, 30, pp. 128-133. (doi: 10.1016/j.meegid.2014.12.017)

Halliday, J. E.B., Knobel, D. L., Agwanda, B. F., Bai, Y., Breiman, R. F., Cleaveland, S., Njenga, M.K., Kosoy, M. (2015) Prevalence and diversity of small mammal-associated Bartonella species in rural and urban Kenya. PLoS Neglected Tropical Diseases, 9, (doi: 10.1371/journal.pntd.0003608)

Shungin, D. et al. (2015) New genetic loci link adipose and insulin biology to body fat distribution. Nature, 518, pp. 187-196. (doi: 10.1038/nature14132)

Viana, M. et al. (2015) Dynamics of a morbillivirus at the domestic-wildlife interface: Canine distemper virus in domestic dogs and lions. Proceedings of the National Academy of Sciences of the United States of America, 112, pp. 1464-1469. (doi: 10.1073/pnas.1411623112)

Capewell, P., Cooper, A., Clucas, C., Weir, W., MacLeod, A. (2015) A co-evolutionary arms race: trypanosomes shaping the human genome, humans shaping the trypanosome genome. Parasitology, 142, pp. S108-S119. (doi: 10.1017/S0031182014000602)

Halliday, J. E. B., Allan, K. J., Ekwem, D., Cleaveland, S., Kazwala, R. R., Crump, J. A. (2015) Endemic zoonoses in the tropics: a public health problem hiding in plain sight. Veterinary Record, 176, pp. 220-225. (doi: 10.1136/vr.h798)

Johnson, P. C. D., Barry, S. J. E., Ferguson, H. M., Müller, P. (2015) Power analysis for generalized linear mixed models in ecology and evolution. Methods in Ecology and Evolution, 6, pp. 133-142. (doi: 10.1111/2041-210X.12306)

Carissimo, G., Pondeville, E., McFarlane, M., Dietrich, I., Mitri, C., Bischoff, E., Antoniewski, C., Bourgouin, C., Failloux, A.-B., Kohl, A., Vernick, K. D. (2015) Antiviral immunity of Anopheles gambiaeis highly compartmentalized, with distinct roles for RNA interference and gut microbiota. Proceedings of the National Academy of Sciences of the United States of America, 112, pp. E176-E185. (doi: 10.1073/pnas.1412984112)

Wade, K. H., Forouhi, N. G., Cook, D. G., Johnson, P., McConnachie, A., Morris, R. W., Rodriguez, S., Ye, Z., Ebrahim, S., Padmanabhan, S., Watt, G., Bruckdorfer, K. R., Wareham, N. J., Whincup, P. H., Chanock, S., Sattar, N., Lawlor, D. A., Davey Smith, G., Timpson, N. J. (2015) Variation in the SLC23A1 gene does not influence cardiometabolic outcomes to the extent expected given its association with L-ascorbic acid. American Journal of Clinical Nutrition, 101, pp. 202-209. (doi: 10.3945/ajcn.114.092981)

Lempereur, L., Shiels, B., Heyman, P., Moreau, E., Saegerman, C., Losson, B., Malandrin, L. (2015) A retrospective serological survey on human babesiosis in Belgium. Clinical Microbiology and Infection, 21, pp. 96.e1-96.e7. (doi: 10.1016/j.cmi.2014.07.004)

Brunker, K., Marston, D. A., Horton, D. L., Cleaveland, S., Fooks, A., Kazwala, R., Ngeleja, C., Lembo, T., Sambo, M., Mtema, Z. J., Sikana, L., Wilkie, G., Biek, R., Hampson, K. (2015) Elucidating the phylodynamics of endemic rabies virus in eastern Africa using whole-genome sequencing. Virus Evolution, 1, pp. 1-11. (doi: 10.1093/ve/vev011)

Swerdlow, D. I. et al. (2015) HMG-coenzyme A reductase inhibition, type 2 diabetes, and bodyweight: evidence from genetic analysis and randomised trials. Lancet, 385, pp. 351-361. (doi: 10.1016/S0140-6736(14)61183-1)

Lankester, F., Cleaveland, S. (2015) The economic impact of malignant catarrhal fever on pastoralist livelihoods. PLoS ONE, 10, pp. e0116059. (doi: 10.1371/journal.pone.0116059)

Mayagaya, V. S., Nkwengulila, G., Lyimo, I. N., Kihonda, J., Mtambala, H., Ngonyani, H., Russell, T. L., Ferguson, H. M. (2015) The impact of livestock on the abundance, resting behaviour and sporozoite rate of malaria vectors in southern Tanzania. Malaria Journal, 14, pp. 17. (doi: 10.1186/s12936-014-0536-8)

Mair, C., Stear, M., Johnson, P., Denwood, M., Jimenez de Cisneros, J. P., Stefan, T., Matthews, L. (2015) A Bayesian generalized random regression model for estimating heritability using overdispersed count data. Genetics Selection Evolution, 47, (doi: 10.1186/s12711-015-0125-5)

Winter, A. D., Gillan, V., Maitland, K., Emes, R. D., Roberts, B., McCormack, G., Weir, W., Protasio, A. V., Holroyd, N., Berriman, M., Britton, C., Devaney, E. (2015) A novel member of the let-7 microRNA family is associated with developmental transitions in filarial nematode parasites. BMC Genomics, 16, (doi: 10.1186/s12864-015-1536-y)

Helm, B., Stevenson, T. (2015) Circannual rhythms: history, present challenges, future directions. Springer Japan

Woolhouse, M. E. J., Thumbi, S. M., Jennings, A., Chase-Topping, M., Callaby, R., Kiara, H., Oosthuizen, M. C., Mbole-Kariuki, M. N., Conradie, I., Handel, I. G., Poole, E. J., Njiiri, E., Collins, N. E., Murray, G., Tapio, M., Auguet, O. T., Weir, W., Morrison, W. I., Kruuk, L. E. B., Bronsvoort, B. M. d. C., Hanotte, O., Coetzer, K., Toye, P. G. (2015) Co-infections determine patterns of mortality in a population exposed to parasite infection. Science Advances, 1, (doi: 10.1126/sciadv.1400026)

Ng’habi, K. R., Lee, Y., Knols, B. G.J., Mwasheshi, D., Lanzaro, G. C., Ferguson, H. M. (2015) Colonization of malaria vectors under semi-field conditions as a strategy for maintaining genetic and phenotypic similarity with wild populations. Malaria Journal, 14, (doi: 10.1186/s12936-014-0523-0)

Kreppel, K.S., Johnson, P.C.D., Govella, N.J., Pombi, M., Maliti, D., Ferguson, H.M. (2015) Comparative evaluation of the sticky-resting-box-trap, the standardised resting-bucket-trap and indoor aspiration for sampling malaria vectors. Parasites and Vectors, 8, (doi: 10.1186/s13071-015-1066-0)

Maliti, D., Govella, N., Killeen, G., Mirzai, N., Johnson, P. C.D., Kreppel, K., Ferguson, H. M. (2015) Development and evaluation of mosquito-electrocuting traps as alternatives to the human landing catch technique for sampling host-seeking malaria vectors. Malaria Journal, 14, (doi: 10.1186/s12936-015-1025-4)

Stevenson, T.J. et al. (2015) Disrupted seasonal biology impacts health, food security and ecosystems. Proceedings of the Royal Society of London Series B: Biological Sciences, 282, (doi: 10.1098/rspb.2015.1453)

Allan, K. J., Biggs, H. M., Halliday, J. E.B., Kazwala, R. R., Maro, V. P., Cleaveland, S., Crump, J. A. (2015) Epidemiology of Leptospirosis in Africa: a systematic review of a neglected zoonosis and a paradigm for 'one health' in Africa. PLoS Neglected Tropical Diseases, 9, (doi: 10.1371/journal.pntd.0003899)

Nord, A., Lehmann, M., MacLeod, R., McCafferty, D. J., Nager, R. G., Nilsson, J.-Å., Helm, B. (2015) Evaluation of two methods for minimally invasive peripheral body temperature measurement in birds. Journal of Avian Biology, 47, pp. 417-427. (doi: 10.1111/jav.00845)

Capewell, P., Cooper, A., Clucas, C., Weir, W., Vaikkinen, H., Morrison, L., Tait, A., MacLeod, A. (2015) Exploiting genetic variation to discover genes involved in important disease phenotypes. Methods in Molecular Biology, 1201, pp. 91-107. (doi: 10.1007/978-1-4939-1438-8_5)

Quintana, J. F., Makepeace, B. L., Babayan, S. A., Ivens, A., Pfarr, K. M., Blaxter, M., Debrah, A., Wanji, S., Ngangyung, H. F., Bah, G. S., Tanya, V. N., Taylor, D. W., Hoerauf, A., Buck, A. H. (2015) Extracellular onchocerca-derived small RNAs in host nodules and blood. Parasites and Vectors, 8, (doi: 10.1186/s13071-015-0656-1)

Kean, J., Rainey, S., McFarlane, M., Donald, C., Schnettler, E., Kohl, A., Pondeville, E. (2015) Fighting arbovirus transmission: natural and engineered control of vector competence in aedes mosquitoes. Insects, 6, pp. 236-278. (doi: 10.3390/insects6010236)

Al-Hamidhi, S., Tageldin, M. H., Weir, W., Al-Fahdi, A., Johnson, E. H., Bobade, P., Alqamashoui, B., Beja-Pereira, A., Thompson, J., Kinnaird, J., Shiels, B., Tait, A., Babiker, H. (2015) Genetic diversity and population structure of Theileria annulata in Oman. PLoS ONE, 10, (doi: 10.1371/journal.pone.0139581)

Locke, A. E. et al. (2015) Genetic studies of body mass index yield new insights for obesity biology. Nature, 518, pp. 197-206. (doi: 10.1038/nature14177)

Jonsson, N. N., Piper, E. K. (2015) Genetics for the bovine practitioner. John Wiley & Sons, Ltd.

Carnes, J. et al. (2015) Genome and phylogenetic analyses of trypanosoma evansi reveal extensive similarity to T. brucei and multiple independent origins for dyskinetoplasty. PLoS Neglected Tropical Diseases, 9, (doi: 10.1371/journal.pntd.0003404)

Bessell, P. R., Auty, H. K., Searle, K. R., Handel, I. G., Purse, B. V., Bronsvoort, B. M. d. C. (2015) Impact of temperature, feeding preference and vaccination on Schmallenberg virus transmission in Scotland. Scientific Reports, 4, (doi: 10.1038/srep05746)

Flores, J.G., Biek, R. (2015) Mitochondrial DNA diversity, genetic structure and demographic history of the Neotropical Otter (Lontra longicaudis) in Mexico. Journal of Mammalogy, (doi: 10.1093/jmammal/gyv124)

Jones, E., McConnell, B., Smout, S., Hammond, P., Duck, C., Morris, C., Thompson, D., Russell, D., Vincent, C., Cronin, M., Sharples, R., Matthiopoulos, J. (2015) Patterns of space use in sympatric marine colonial predators reveal scales of spatial partitioning. Marine Ecology Progress Series, 534, pp. 235-249. (doi: 10.3354/meps11370)

Boden, L., Auty, H. (2015) Public health risk of Giardia and Cryptosporidium posed by reintroduction of beavers into Scotland.

Allan, K. J., Halliday, J. E.B., Cleaveland, S. (2015) Renewing the momentum for leptospirosis research in Africa. Transactions of the Royal Society of Tropical Medicine and Hygiene, 109, pp. 605-606. (doi: 10.1093/trstmh/trv072)

Wong, M. L., Chua, T. H., Leong, C. S., Khaw, L. T., Fornace, K., Wan-Sulaiman, W.-Y., William, T., Drakeley, C., Ferguson, H. M., Vythilingam, I. (2015) Seasonal and spatial dynamics of the primary vector of plasmodium knowlesi within a major transmission focus in Sabah, Malaysia. PLoS Neglected Tropical Diseases, 9, (doi: 10.1371/journal.pntd.0004135)

Goymann, W., Helm, B. (2015) Seasonality of life-cycles in tropical birds: circannual rhythms and Zeitgeber. Springer Japan

Makepeace, B. L., Babayan, S. A., Lustigman, S., Taylor, D. W. (2015) The case for vaccine development in the strategy to eradicate river blindness (onchocerciasis) from Africa. Expert Review of Vaccines, 14, pp. 1163-1165. (doi: 10.1586/14760584.2015.1059281)

Auty, H., Bessell, P., Boden, L., Bronsvoort, M., Duckett, D., Kyle, C., Liu, J., Mckendrick, I. (2015) What Will the Scottish Sheep Industry Look Like in 2040 and How Resilient Will It Be to Livestock Disease?