Number of items: 53.
2024
MacDonald, Alasdair I., Baksh, Aron, Holland, Alexandria, Shin, Heewhan, Rice, Phoebe A., Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572 and Olorunniji, Femi J.
(2024)
Variable orthogonality of serine integrase interactions within the ϕC31 family.
Scientific Reports, 14(1),
26280.
(doi: 10.1038/s41598-024-77570-9)
(PMID:39487291)
2023
Abioye, Jumai, Lawson‐Williams, Makeba, Lecanda, Alicia, Calhoon, Brecken, McQue, Arlene L., Colloms, Sean D.
ORCID: https://orcid.org/0000-0003-2369-8168, Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572 and Olorunniji, Femi J.
(2023)
High fidelity one‐pot DNA assembly using orthogonal serine integrases.
Biotechnology Journal, 18(3),
2200411.
(doi: 10.1002/biot.202200411)
(PMID:36504358)
Montaño, Sherwin P., Rowland, Sally-J., Fuller, James R., Burke, Mary E., MacDonald, Alasdair I., Boocock, Martin R., Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572 and Rice, Phoebe A.
(2023)
Structural basis for topological regulation of Tn3 resolvase.
Nucleic Acids Research, 51(3),
pp. 1001-1018.
(doi: 10.1093/nar/gkac733)
(PMID:36100255)
(PMCID:PMC9943657)
2020
Rowland, Sally-J., Boocock, Martin R., Burke, Mary E., Rice, Phoebe A. and Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572
(2020)
The protein-protein interactions required for assembly of the Tn3 resolution synapse.
Molecular Microbiology, 114(6),
pp. 952-965.
(doi: 10.1111/mmi.14579)
(PMID:33405333)
Waraich, Nidda F., Jain, Shruti, Colloms, Sean D.
ORCID: https://orcid.org/0000-0003-2369-8168, Stark, William Marshall
ORCID: https://orcid.org/0000-0001-8086-2572, Burton, Nicolas P. and Maxwell, Anthony
(2020)
A novel decatenation assay for DNA topoisomerases using a singly-linked catenated substrate.
BioTechniques, 69(5),
pp. 356-362.
(doi: 10.2144/btn-2020-0059)
(PMID:33000631)
2019
Olorunniji, Femi J., Lawson-Williams, Makeba, McPherson, Arlene L., Paget, Jane E., Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572 and Rosser, Susan J.
(2019)
Control of ϕC31 integrase-mediated site-specific recombination by protein trans-splicing.
Nucleic Acids Research, 47(21),
pp. 11452-11460.
(doi: 10.1093/nar/gkz936)
(PMID:31667500)
(PMCID:PMC6868429)
Gao, Hong, Murugesan, Buvani, Hoßbach, Janina, Evans, Stephanie K., Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572 and Smith, Margaret C.M.
(2019)
Integrating vectors for genetic studies in the rare Actinomycete Amycolatopsis marina.
BMC Biotechnology, 19,
32.
(doi: 10.1186/s12896-019-0521-y)
(PMID:31164159)
(PMCID:PMC6549336)
2018
Trejo, Caitlin S., Rock, Ronald S., Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572, Boocock, Martin R. and Rice, Phoebe A.
(2018)
Snapshots of a molecular swivel in action.
Nucleic Acids Research, 46(10),
pp. 5286-5296.
(doi: 10.1093/nar/gkx1309)
(PMID:29315406)
(PMCID:PMC6007550)
Pokhilko, Alexandra, Ebenhöh, Oliver, Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572 and Colloms, Sean D.
ORCID: https://orcid.org/0000-0003-2369-8168
(2018)
Mathematical model of a serine integrase-controlled toggle switch with a single input.
Journal of the Royal Society: Interface, 15(143),
20180160.
(doi: 10.1098/rsif.2018.0160)
(PMID:29875284)
(PMCID:PMC6030632)
Fogg, Paul C.M., Younger, Ellen, Fernando, Booshini D., Khaleel, Thanafez, Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572 and Smith, Margaret C.M.
(2018)
Recombination directionality factor gp3 binds ϕC31 integrase via the zinc domain, potentially affecting the trajectory of the coiled-coil motif.
Nucleic Acids Research, 46(3),
pp. 1308-1320.
(doi: 10.1093/nar/gkx1233)
(PMID:29228292)
(PMCID:PMC5814800)
2017
Olorunniji, Femi J., McPherson, Arlene L., Rosser, Susan J., Smith, Margaret C.M., Colloms, Sean D.
ORCID: https://orcid.org/0000-0003-2369-8168 and Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572
(2017)
Control of serine integrase recombination directionality by fusion with the directionality factor.
Nucleic Acids Research, 45(14),
pp. 8635-8645.
(doi: 10.1093/nar/gkx567)
(PMID:28666339)
(PMCID:PMC5737554)
Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572
(2017)
Making serine integrases work for us.
Current Opinion in Microbiology, 38,
pp. 130-136.
(doi: 10.1016/j.mib.2017.04.006)
(PMID:28599144)
Fogg, Paul C.M., Haley, Joshua A., Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572 and Smith, Margaret C.M.
(2017)
Genome integration and excision by a new Streptomyces Bacteriophage ϕJoe.
Applied and Environmental Microbiology, 83(5),
e02767-16.
(doi: 10.1128/AEM.02767-16)
(PMID:28003200)
(PMCID:PMC5311408)
Olorunniji, Femi J., Merrick, Christine, Rosser, Susan J., Smith, Margaret C.M., Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572 and Colloms, Sean D.
ORCID: https://orcid.org/0000-0003-2369-8168
(2017)
Multipart DNA assembly using site-specific recombinases from the large serine integrase family.
In: Eroshenko, Nikolai (ed.)
Site-Specific Recombinases: Methods and Protocols.
Series: Methods in molecular biology (1642).
Springer New York, pp. 303-323.
ISBN 9781493971671
(doi: 10.1007/978-1-4939-7169-5_19)
Olorunniji, Femi J., Rosser, Susan J. and Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572
(2017)
Purification and in vitro characterization of zinc finger recombinases.
In: Eroshenko, N. (ed.)
Site-Specific Recombinases: Methods and Protocols.
Series: Methods in molecular biology (1642).
Humana Press, pp. 229-245.
ISBN 9781493971671
(doi: 10.1007/978-1-4939-7169-5_15)
2016
Bebel, Aleksandra, Karaca, Ezgi, Kumar, Banushree, Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572 and Barabas, Orsolya
(2016)
Structural snapshots of Xer recombination reveal activation by synaptic complex remodeling and DNA bending.
eLife, 5,
e19706.
(doi: 10.7554/eLife.19706)
(PMID:28009253)
(PMCID:PMC5241119)
Pokhilko, Alexandra, Zhao, Jia, Ebenhöh, Oliver, Smith, Margaret C.M., Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572 and Colloms, Sean D.
ORCID: https://orcid.org/0000-0003-2369-8168
(2016)
The mechanism of φC31 integrase directionality: experimental analysis and computational modelling.
Nucleic Acids Research, 44(15),
pp. 7360-7372.
(doi: 10.1093/nar/gkw616)
(PMID:27387286)
(PMCID:PMC5009753)
Olorunniji, Femi J., Rosser, Susan J. and Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572
(2016)
Site-specific recombinases: molecular machines for the genetic revolution.
Biochemical Journal, 473(6),
pp. 673-684.
(doi: 10.1042/bj20151112)
(PMID:26965385)
Barrett, M.
ORCID: https://orcid.org/0000-0001-9447-3519, Sloan, W.
ORCID: https://orcid.org/0000-0002-9450-7384, Stark, W.
ORCID: https://orcid.org/0000-0001-8086-2572 and Watson, I.
ORCID: https://orcid.org/0000-0002-4002-4977
(2016)
New Developments in Synthetic Biology at the University of Glasgow.
Industrial Biotechnology Innovation Centre Annual Conference, Glasgow, UK, 28-29 Jan 2016.
Pokhilko, Alexandra, Zhao, Jia, Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572, Colloms, Sean D.
ORCID: https://orcid.org/0000-0003-2369-8168 and Ebenhöh, Oliver
(2016)
A simplified mathematical model of directional DNA site-specific recombination by serine integrases.
Journal of the Royal Society: Interface, 14,
20160618.
(doi: 10.1098/rsif.2016.0618)
(PMID:28077763)
(PMCID:PMC5310728)
2015
Olorunniji, Femi J., McPherson, Arlene L., Pavlou, Hania J., McIlwraith, Michael J., Brazier, John A., Cosstick, Richard and Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572
(2015)
Nicked-site substrates for a serine recombinase reveal enzyme–DNA communications and an essential tethering role of covalent enzyme–DNA linkages.
Nucleic Acids Research,
(doi: 10.1093/nar/gkv521)
(PMID:25990737)
(PMCID:PMC4499144))
Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572
(2015)
The serine recombinases.
In: Craig, N., Chandler, M., Gellert, M., Lambowitz, A, Rice, P. and Sandmeyer, S. (eds.)
Mobile DNA III.
ASM Press: Washington, DC, pp. 73-89.
(doi: 10.1128/9781555819217)
2014
Fogg, Paul C.M., Colloms, Sean
ORCID: https://orcid.org/0000-0003-2369-8168, Rosser, Susan, Stark, Marshall
ORCID: https://orcid.org/0000-0001-8086-2572 and Smith, Margaret C.M.
(2014)
New applications for phage integrases.
Journal of Molecular Biology, 426(15),
pp. 2703-2716.
(doi: 10.1016/j.jmb.2014.05.014)
(PMID:24857859)
(PMCID:PMC4111918)
Colloms, S.D.
ORCID: https://orcid.org/0000-0003-2369-8168, Merrick, C.A., Olorunniji, F.J., Stark, W.M.
ORCID: https://orcid.org/0000-0001-8086-2572, Smith, M.C.M., Osbourn, A., Keasling, J.D. and Rosser, S.J.
(2014)
Rapid metabolic pathway assembly and modification using serine integrase site-specific recombination.
Nucleic Acids Research, 42(4),
e23.
(doi: 10.1093/nar/gkt1101)
(PMID:24225316)
(PMCID:PMC3936721)
2012
Olorunniji, Femi J., Buck, Dorothy E., Colloms, Sean D.
ORCID: https://orcid.org/0000-0003-2369-8168, McEwan, Andrew R., Smith, Margaret C. M., Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572 and Rosser, Susan J.
(2012)
Gated rotation mechanism of site-specific recombination by ϕC31 integrase.
Proceedings of the National Academy of Sciences of the United States of America, 109(48),
pp. 19661-19666.
(doi: 10.1073/pnas.1210964109)
Prorocic, M.M., Wenlong, D., Olorunniji, F.J., Akopian, A., Schloetel, J.-G., Hannigan, A., McPherson, A.L. and Stark, W.M.
ORCID: https://orcid.org/0000-0001-8086-2572
(2012)
Zinc-finger recombinase activities in vitro.
Nucleic Acids Research, 39(21),
pp. 9316-9328.
(doi: 10.1093/nar/gkr652)
(PMID:21849325)
(PMCID:PMC3241657)
2011
Keenholtz, R.A., Rowland, S.-J., Boocock, M.R., Stark, W.M
ORCID: https://orcid.org/0000-0001-8086-2572 and Rice, P.A.
(2011)
Structural Basis for Catalytic Activation of a Serine Recombinase.
Structure, 19(6),
pp. 799-809.
(doi: 10.1016/j.str.2011.03.017)
Proudfoot, C., McPherson, A.L., Kolb, A.F. and Stark, W.M.
ORCID: https://orcid.org/0000-0001-8086-2572
(2011)
Zinc finger recombinases with adaptable DNA sequence specificity.
PLoS ONE, 6(4),
e19537.
(doi: 10.1371/journal.pone.0019537)
(PMID:21559340)
(PMCID:PMC3084882)
Stark, W.M.
ORCID: https://orcid.org/0000-0001-8086-2572
(2011)
Cutting out the φC31 prophage.
Molecular Microbiology, 80(6),
pp. 1417-1419.
(doi: 10.1111/j.1365-2958.2011.07699.x)
(PMID:21564340)
(PMCID:PMC3132441)
Stark, W.M.
ORCID: https://orcid.org/0000-0001-8086-2572, Boocock, M.R., Olorunniji, F.J. and Rowland, S.-J.
(2011)
Intermediates in serine recombinase-mediated site-specific recombination.
Biochemical Society Transactions, 39(2),
pp. 617-622.
(doi: 10.1042/BST0390617)
2010
Mouw, K.W., Steiner, A.M., Ghirlando, R., Li, N.-S., Rowland, S.-J., Boocock, M.R., Stark, W.M.
ORCID: https://orcid.org/0000-0001-8086-2572, Piccirilli, J.A. and Rice, P.A.
(2010)
Sin resolvase catalytic activity and oligomerization state are tightly coupled.
Journal of Molecular Biology, 404(1),
pp. 16-33.
(doi: 10.1016/j.jmb.2010.08.057)
Olorunniji, F.J. and Stark, W.M.
ORCID: https://orcid.org/0000-0001-8086-2572
(2010)
Catalysis of site-specific recombination by Tn3 resolvase.
Biochemical Society Transactions, 38(2),
pp. 417-421.
(doi: 10.1042/BST0380417)
(PMID:20298194)
Rice, P.A., Mouw, K.W., Montaño, S.P., Boocock, M.R., Rowland, S.-J. and Stark, W.M.
ORCID: https://orcid.org/0000-0001-8086-2572
(2010)
Orchestrating serine resolvases.
Biochemical Society Transactions, 38(2),
pp. 384-387.
(doi: 10.1042/BST0380384)
Stark, W.M.
ORCID: https://orcid.org/0000-0001-8086-2572, Luisi, B.F. and Bowater, R.P.
(2010)
Machines on genes: enzymes that make, break and move DNA and RNA.
Biochemical Society Transactions, 38(2),
pp. 381-383.
(doi: 10.1042/BST0380381)
2009
Olorunniji, F.J. and Stark, W.M.
(2009)
The catalytic residues of Tn3 resolvase.
Nucleic Acids Research, 37(22),
pp. 7590-7602.
(doi: 10.1093/nar/gkp797)
(PMID:19789272)
(PMCID:PMC2794168)
Rowland, S.J., Boocock, M.R., MacPherson, A.L., Mouw, K.W., Rice, P.A. and Stark, M.S.
ORCID: https://orcid.org/0000-0001-8086-2572
(2009)
Regulatory mutations in Sin recombinase support a structure-based model of the synaptosome.
Molecular Microbiology, 74(2),
pp. 282-298.
(doi: 10.1111/j.1365-2958.2009.06756.x)
2008
Olorunniji, F.J., He, J., Wenwieser, S.V.C.T., Boocock, M.R. and Stark, W.M.
(2008)
Synapsis and catalysis by activated Tn3 resolvase mutants.
Nucleic Acids Research, 36(22),
pp. 7181-7191.
(doi: 10.1093/nar/gkn885)
Mouw, K.W., Rowland, S.-J., Gajjar, M.M., Boocock, M.R., Stark, W.M. and Rice, P.A.
(2008)
Architecture of a serine recombinase-DNA regulatory complex.
Molecular Cell, 30(2),
pp. 145-155.
(doi: 10.1016/j.molcel.2008.02.023)
2006
Kilbride, EA, Burke, ME, Boocock, MR and Stark, WM
ORCID: https://orcid.org/0000-0001-8086-2572
(2006)
Determinants of product topology in a hybrid Cre-Tn3 resolvase site-specific recombination system.
Journal of Molecular Biology, 355,
pp. 185-195.
(doi: 10.1016/j.jmb.2005.10.046)
Rowland, SJ, Boocock, MR and Stark, WM
ORCID: https://orcid.org/0000-0001-8086-2572
(2006)
DNA bending in the Sin recombination synapse: functional replacement of HU by IHF.
Molecular Microbiology, 59,
pp. 1730-1743.
(doi: 10.1111/j.1365-2958.2006.05064.x)
2005
Nollmann, M, Byron, O and Stark, WM
(2005)
Behavior of Tn3 resolvase in solution and its interaction with res.
Biophysical Journal, 89,
pp. 1920-1931.
(doi: 10.1529/biophysj.104.058164)
Nollmann, M, Stark, WM and Byron, O
(2005)
A global multi-technique approach to study low-resolution solution structures.
Journal of Applied Crystallography, 38,
pp. 874-887.
(doi: 10.1107/S0021889805026191)
Rowland, SJ, Boocock, MR and Stark, WM
ORCID: https://orcid.org/0000-0001-8086-2572
(2005)
Regulation of Sin recombinase by accessory proteins.
Molecular Microbiology, 56,
pp. 371-382.
(doi: 10.1111/j.1365-2958.2005.04550.x)
Stark, W
ORCID: https://orcid.org/0000-0001-8086-2572
(2005)
Site-specific DNA recombinases as instruments for genomic surgery.
Advances in Genetics, 55,
pp. 1-23.
(doi: 10.1016/S0065-2660(05)55001-6)
2004
Nöllmann, Marcelo, He, Jiuya, Byron, Olwyn
ORCID: https://orcid.org/0000-0001-7857-4520 and Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572
(2004)
Solution structure of the Tn3 resolvase-crossover site synaptic complex.
Molecular Cell, 16(1),
pp. 127-137.
(doi: 10.1016/j.molcel.2004.09.027)
(PMID:15469828)
Nöllmann, Marcelo, Stark, W. Marshall
ORCID: https://orcid.org/0000-0001-8086-2572 and Byron, Olwyn
ORCID: https://orcid.org/0000-0001-7857-4520
(2004)
Low-resolution reconstruction of a synthetic DNA Holliday junction.
Biophysical Journal, 86(5),
pp. 3060-3069.
(doi: 10.1016/S0006-3495(04)74355-6)
(PMID:15111420)
(PMCID:PMC1304172)
Burke, ME, Arnold, PH, He, JY, Wenwieser, SVCT, Rowland, SJ, Boocock, MR and Stark, WM
ORCID: https://orcid.org/0000-0001-8086-2572
(2004)
Activating mutations of Tn3 resolvase marking interfaces important in recombination catalysis and its regulation.
Molecular Microbiology, 51,
pp. 837-948.
(doi: 10.1046/j.1365-2958.2003.03831.x)
2003
Akopian, A, He, JY, Boocock, MR and Stark, WM
ORCID: https://orcid.org/0000-0001-8086-2572
(2003)
Chimeric recombinases with designed DNA sequence recognition.
Proceedings of the National Academy of Sciences of the United States of America, 100(15),
pp. 8688-8691.
(doi: 10.1073/pnas.1533177100)
Stark, W
ORCID: https://orcid.org/0000-0001-8086-2572
(2003)
Designer recombinases: tools to cut and paste genomic DNA sequences.
Discovery Medicine, 3(18),
pp. 34-35.
2002
Brown, JL, He, JY, Sherratt, DJ, Stark, WM
ORCID: https://orcid.org/0000-0001-8086-2572 and Boocock, MR
(2002)
Interactions of protein complexes on supercoiled DNA: The mechanism of selective synapsis by Tn3 resolvase.
Journal of Molecular Biology, 319,
pp. 371-383.
(doi: 10.1016/S0022-2836(02)00309-1)
He, JY, McIlwraith, MJ, Burke, ME, Boocock, MR and Stark, WM
ORCID: https://orcid.org/0000-0001-8086-2572
(2002)
Synapsis of Tn3 recombination sites: Unpaired sites destabilize synapses by a partner exchange mechanism.
Journal of Molecular Biology, 319,
pp. 385-393.
(doi: 10.1016/S0022-2836(02)00310-8)
Rowland, SJ, Stark, WM
ORCID: https://orcid.org/0000-0001-8086-2572 and Boocock, MR
(2002)
Sin recombinase from Staphylococcus aureus: synaptic complex architecture and transposon targeting.
Molecular Microbiology, 44,
pp. 607-619.
2001
Sarkis, GJ, Murley, LL, Leschziner, AE, Boocock, MR, Stark, WM
ORCID: https://orcid.org/0000-0001-8086-2572 and Grindley, NDF
(2001)
A model for the gamma delta resolvase synaptic complex.
Molecular Cell, 8,
pp. 623-631.
This list was generated on Sun Jun 15 21:54:39 2025 BST.