2022

Rinaldi, G., Attenborough, T., Rawlinson, K. A. and Berriman, M. (2022) Schistosomes go single cell. Nature Reviews Microbiology, 20, p. 705. (doi: 10.1038/s41579-022-00810-0) (PMID:36229520)

Cortés, A. et al. (2022) The gut microbial metabolic capacity of microbiome-humanized vs. wild type rodents reveals a likely dual role of intestinal bacteria in hepato-intestinal schistosomiasis. PLoS Neglected Tropical Diseases, 16(10), e0010878. (doi: 10.1371/journal.pntd.0010878) (PMID:36279280) (PMCID:PMC9633004)

Vianney, T. J. et al. (2022) Genome-wide analysis of Schistosoma mansoni reveals limited population structure and possible praziquantel drug selection pressure within Ugandan hot-spot communities. PLoS Neglected Tropical Diseases, 16(8), e0010188. (doi: 10.1371/journal.pntd.0010188) (PMID:35981002)

Coghlan, A., Padalino, G., O'Boyle, N. M., Hoffmann, K. F. and Berriman, M. (2022) Identification of anti-schistosomal, anthelmintic and anti-parasitic compounds curated and text-mined from the scientific literature. Wellcome Open Research, 7, 193. (doi: 10.12688/wellcomeopenres.17987.1) (PMID:36003342) (PMCID:PMC9363976)

Costain, A. H. et al. (2022) Dynamics of host immune response development during Schistosoma mansoni infection. Frontiers in Immunology, 13, 906338. (doi: 10.3389/fimmu.2022.906338)

Aunin, E., Berriman, M. and Reid, A. J. (2022) Characterising genome architectures using genome decomposition analysis. BMC Genomics, 23, 398. (doi: 10.1186/s12864-022-08616-3) (PMID:35610562)

2020

Imamura, H., Monsieurs, P., Jara, M., Sanders, M., Maes, I., Vanaerschot, M., Berriman, M., Cotton, J. A. , Dujardin, J.-C. and Domagalska, M. A. (2020) Evaluation of whole genome amplification and bioinformatic methods for the characterization of Leishmania genomes at a single cell level. Scientific Reports, 10, 15043. (doi: 10.1038/s41598-020-71882-2) (PMID:32929126) (PMCID:PMC7490275)

2019

Sallé, G., Doyle, S.R., Cortet, J., Cabaret, J., Berriman, M., Holroyd, N. and Cotton, J.A. (2019) The global diversity of Haemonchus contortus is shaped by human intervention and climate. Nature Communications, 10, 4811. (doi: 10.1038/s41467-019-12695-4) (PMID:31641125) (PMCID:PMC6805936)

2018

Cotton, J. A. , Berriman, M., Dalén, L. and Barnes, I. (2018) Eradication genomics-lessons for parasite control. Science, 361(6398), pp. 130-131. (doi: 10.1126/science.aar6609) (PMID:30002241)

Sargison, N. D., Redman, E., Morrison, A. A., Bartley, D. J., Jackson, F., Naghra-van Gijzel, H., Holroyd, N., Berriman, M., Cotton, J. A. and Gilleard, J. S. (2018) A method for single pair mating in an obligate parasitic nematode. International Journal for Parasitology, 48(2), pp. 159-165. (doi: 10.1016/j.ijpara.2017.08.010) (PMID:29111440)

2017

Iantorno, S. A. et al. (2017) Gene expression in Leishmania is regulated predominantly by gene dosage. mBio, 8(5), e01393-17. (doi: 10.1128/mBio.01393-17) (PMID:28900023) (PMCID:PMC5596349)

Dumetz, F. et al. (2017) Modulation of aneuploidy in leishmania donovani during adaptation to different in vitro and in vivo environments and its impact on gene expression. mBio, 8(3), e00599-17. (doi: 10.1128/mBio.00599-17) (PMID:28536289) (PMCID:PMC5442457)

2016

Bennuru, S. et al. (2016) Stage-specific transcriptome and proteome analyses of the filarial parasite Onchocerca volvulus and its Wolbachia endosymbiont. mBio, 7(6), e02028-16. (doi: 10.1128/mBio.02028-16) (PMID:27881553) (PMCID:PMC5137501)

Cotton, J. A. et al. (2016) The genome of Onchocerca volvulus, agent of river blindness. Nature Microbiology, 2, 16216. (doi: 10.1038/nmicrobiol.2016.216) (PMID:27869790) (PMCID:PMC5310847)

Hunt, V. L. et al. (2016) The genomic basis of parasitism in the Strongyloides clade of nematodes. Nature Genetics, 48(3), pp. 299-307. (doi: 10.1038/ng.3495) (PMID:26829753) (PMCID:PMC4948059)

Crellen, T. et al. (2016) Whole genome resequencing of the human parasite Schistosoma mansoni reveals population history and effects of selection. Scientific Reports, 6, 20954. (doi: 10.1038/srep20954) (PMID:26879532) (PMCID:PMC4754680)

2014

Attardo, G. M. et al. (2014) Genome sequence of the Tsetse fly (Glossina morsitans): vector of African trypanosomiasis. Science, 344(6182), pp. 380-386. (doi: 10.1126/science.1249656) (PMID:24763584) (PMCID:PMC4077534)

Rogers, M. B., Downing, T., Smith, B. A., Imamura, H., Sanders, M., Svobodova, M., Volf, P., Berriman, M., Cotton, J. A. and Smith, D. F. (2014) Genomic confirmation of hybridisation and recent inbreeding in a vector-isolated Leishmania population. PLoS Genetics, 10(1), e1004092. (doi: 10.1371/journal.pgen.1004092) (PMID:24453988) (PMCID:PMC3894156)

2013

Saunders, G. I., Wasmuth, J. D., Beech, R., Laing, R. , Hunt, M., Naghra, H., Cotton, J. A. , Berriman, M., Britton, C. and Gilleard, J. S. (2013) Characterization and comparative analysis of the complete Haemonchus contortus β-tubulin gene family and implications for benzimidazole resistance in strongylid nematodes. International Journal for Parasitology, 43(6), pp. 465-475. (doi: 10.1016/j.ijpara.2012.12.011) (PMID:23416426)

Articles

Rinaldi, G., Attenborough, T., Rawlinson, K. A. and Berriman, M. (2022) Schistosomes go single cell. Nature Reviews Microbiology, 20, p. 705. (doi: 10.1038/s41579-022-00810-0) (PMID:36229520)

Cortés, A. et al. (2022) The gut microbial metabolic capacity of microbiome-humanized vs. wild type rodents reveals a likely dual role of intestinal bacteria in hepato-intestinal schistosomiasis. PLoS Neglected Tropical Diseases, 16(10), e0010878. (doi: 10.1371/journal.pntd.0010878) (PMID:36279280) (PMCID:PMC9633004)

Vianney, T. J. et al. (2022) Genome-wide analysis of Schistosoma mansoni reveals limited population structure and possible praziquantel drug selection pressure within Ugandan hot-spot communities. PLoS Neglected Tropical Diseases, 16(8), e0010188. (doi: 10.1371/journal.pntd.0010188) (PMID:35981002)

Coghlan, A., Padalino, G., O'Boyle, N. M., Hoffmann, K. F. and Berriman, M. (2022) Identification of anti-schistosomal, anthelmintic and anti-parasitic compounds curated and text-mined from the scientific literature. Wellcome Open Research, 7, 193. (doi: 10.12688/wellcomeopenres.17987.1) (PMID:36003342) (PMCID:PMC9363976)

Costain, A. H. et al. (2022) Dynamics of host immune response development during Schistosoma mansoni infection. Frontiers in Immunology, 13, 906338. (doi: 10.3389/fimmu.2022.906338)

Aunin, E., Berriman, M. and Reid, A. J. (2022) Characterising genome architectures using genome decomposition analysis. BMC Genomics, 23, 398. (doi: 10.1186/s12864-022-08616-3) (PMID:35610562)

Imamura, H., Monsieurs, P., Jara, M., Sanders, M., Maes, I., Vanaerschot, M., Berriman, M., Cotton, J. A. , Dujardin, J.-C. and Domagalska, M. A. (2020) Evaluation of whole genome amplification and bioinformatic methods for the characterization of Leishmania genomes at a single cell level. Scientific Reports, 10, 15043. (doi: 10.1038/s41598-020-71882-2) (PMID:32929126) (PMCID:PMC7490275)

Sallé, G., Doyle, S.R., Cortet, J., Cabaret, J., Berriman, M., Holroyd, N. and Cotton, J.A. (2019) The global diversity of Haemonchus contortus is shaped by human intervention and climate. Nature Communications, 10, 4811. (doi: 10.1038/s41467-019-12695-4) (PMID:31641125) (PMCID:PMC6805936)

Cotton, J. A. , Berriman, M., Dalén, L. and Barnes, I. (2018) Eradication genomics-lessons for parasite control. Science, 361(6398), pp. 130-131. (doi: 10.1126/science.aar6609) (PMID:30002241)

Sargison, N. D., Redman, E., Morrison, A. A., Bartley, D. J., Jackson, F., Naghra-van Gijzel, H., Holroyd, N., Berriman, M., Cotton, J. A. and Gilleard, J. S. (2018) A method for single pair mating in an obligate parasitic nematode. International Journal for Parasitology, 48(2), pp. 159-165. (doi: 10.1016/j.ijpara.2017.08.010) (PMID:29111440)

Iantorno, S. A. et al. (2017) Gene expression in Leishmania is regulated predominantly by gene dosage. mBio, 8(5), e01393-17. (doi: 10.1128/mBio.01393-17) (PMID:28900023) (PMCID:PMC5596349)

Dumetz, F. et al. (2017) Modulation of aneuploidy in leishmania donovani during adaptation to different in vitro and in vivo environments and its impact on gene expression. mBio, 8(3), e00599-17. (doi: 10.1128/mBio.00599-17) (PMID:28536289) (PMCID:PMC5442457)

Bennuru, S. et al. (2016) Stage-specific transcriptome and proteome analyses of the filarial parasite Onchocerca volvulus and its Wolbachia endosymbiont. mBio, 7(6), e02028-16. (doi: 10.1128/mBio.02028-16) (PMID:27881553) (PMCID:PMC5137501)

Cotton, J. A. et al. (2016) The genome of Onchocerca volvulus, agent of river blindness. Nature Microbiology, 2, 16216. (doi: 10.1038/nmicrobiol.2016.216) (PMID:27869790) (PMCID:PMC5310847)

Hunt, V. L. et al. (2016) The genomic basis of parasitism in the Strongyloides clade of nematodes. Nature Genetics, 48(3), pp. 299-307. (doi: 10.1038/ng.3495) (PMID:26829753) (PMCID:PMC4948059)

Crellen, T. et al. (2016) Whole genome resequencing of the human parasite Schistosoma mansoni reveals population history and effects of selection. Scientific Reports, 6, 20954. (doi: 10.1038/srep20954) (PMID:26879532) (PMCID:PMC4754680)

Attardo, G. M. et al. (2014) Genome sequence of the Tsetse fly (Glossina morsitans): vector of African trypanosomiasis. Science, 344(6182), pp. 380-386. (doi: 10.1126/science.1249656) (PMID:24763584) (PMCID:PMC4077534)

Rogers, M. B., Downing, T., Smith, B. A., Imamura, H., Sanders, M., Svobodova, M., Volf, P., Berriman, M., Cotton, J. A. and Smith, D. F. (2014) Genomic confirmation of hybridisation and recent inbreeding in a vector-isolated Leishmania population. PLoS Genetics, 10(1), e1004092. (doi: 10.1371/journal.pgen.1004092) (PMID:24453988) (PMCID:PMC3894156)

Saunders, G. I., Wasmuth, J. D., Beech, R., Laing, R. , Hunt, M., Naghra, H., Cotton, J. A. , Berriman, M., Britton, C. and Gilleard, J. S. (2013) Characterization and comparative analysis of the complete Haemonchus contortus β-tubulin gene family and implications for benzimidazole resistance in strongylid nematodes. International Journal for Parasitology, 43(6), pp. 465-475. (doi: 10.1016/j.ijpara.2012.12.011) (PMID:23416426)