Dr Sreenu Vattipally

  • Bioinformatician (Centre for Virus Research)

Research interests

CVR logo

Viral genomics & bioinformatics programme

I am a computational biologist, working to understand behaviour and evolution of viruses by means of computational analysis. My passion is to develop new algorithms and theoretical models that help comprehend complex biological processes.

My experience spans large-scale biological data exploration, the theory and development of new algorithms, coding tailor-made programs and building web driven applications and databases.

My broad research interests include:

  • Next generation sequence analysis
  • Protein-ligand interactions and docking studies
  • Analysis of viral epitope mutations
  • Intra, inter and extra host evolution of viruses
  • MicroRNA analysis

My main focus of current research is the genome sequence analysis of Hepatitis C virus (HCV). I am currently working on high throughput HCV genome sequence data to understand its intra and extra host genome dynamics. As part of this work, I am currently developing novel tools that will greatly improve next generation sequence mapping as well as locating mutations that play a key role in host immune response and anti-viral drug resistance. Additionally, I am also interested in understanding the relationship between human leukocyte antigen (HLA) types and the spontaneous clearance of viral diseases.

Colloborators

My current collaborators are Dr. Emma Thomson, Prof. John McLauchlan, Dr. Pablo Murcia and Dr. Carol Leitch from the Centre for Virus Research (CVR) and I always welcome new collaborations.

Additionally, I also collaborate with STOP-HCV, a nationwide multi-institutional led consortium initiated by Medical Research Council, UK to develop stratified medicine approaches to treat HCV patients.


Publications

List by: Type | Date

Jump to: 2019 | 2018 | 2017 | 2016 | 2015 | 2014 | 2013 | 2011 | 2009 | 2008 | 2007 | 2006 | 2005 | 2003 | 2002
Number of items: 37.

2019

Jerome, H. et al. (2019) Metagenomic next-generation sequencing aids the diagnosis of viral infections in febrile returning travellers. Journal of Infection, (doi:10.1016/j.jinf.2019.08.003) (PMID:31398374) (In Press)

Bamford, C., Wignall-Fleming, E., Sreenu, V. B. , Randall, R., Duprex, P. and Rima, B. (2019) Unusual, stable replicating viruses generated from mumps virus cDNA clones. PLoS ONE, 14(7), e0219168. (doi:10.1371/journal.pone.0219168) (PMID:31276568)

Wignall-Fleming, E. B., Hughes, D. J., Vattipally, S. , Modha, S. , Goodbourn, S., Davison, A. J. and Randall, R. E. (2019) Analysis of paramyxovirus transcription and replication by high-throughput sequencing. Journal of Virology, (doi:10.1128/JVI.00571-19) (PMID:31189700) (Early Online Publication)

Yen, P.-S., Chen, C.-H., Sreenu, V. , Kohl, A. and Failloux, A.-B. (2019) Assessing the potential interactions between cellular miRNA and arboviral genomic RNA in the Yellow Fever mosquito, Aedes aegypti. Viruses, 11(6), 540. (doi:10.3390/v11060540) (PMID:31185697)

Suárez, N. M. et al. (2019) Human cytomegalovirus genomes sequenced directly from clinical material: variation, multiple-strain infection, recombination and gene loss. Journal of Infectious Diseases, (PMID:31050742) (Early Online Publication)

Davis, C. et al. (2019) New highly diverse hepatitis C strains detected in sub‐Saharan Africa have unknown susceptibility to direct‐acting antiviral treatments. Hepatology, 69(4), pp. 1426-1441. (doi:10.1002/hep.30342) (PMID:30387174) (PMCID:PMC6492010)

2018

Donald, C. L. , Varjak, M. , Aguiar, E. R. G. R., Marques, J. T., Sreenu, V. B. , Schnettler, E. and Kohl, A. (2018) Antiviral RNA interference activity in cells of the predatory mosquito, Toxorhynchites amboinensis. Viruses, 10(12), 694. (doi:10.3390/v10120694) (PMID:30563205) (PMCID:PMC6316411)

Franzke, K. et al. (2018) Detection, infection dynamics and small RNA response against Culex Y virus in mosquito-derived cells. Journal of General Virology, 99, pp. 1739-1745. (doi:10.1099/jgv.0.001173) (PMID:30394867)

Dunlop, J. I. et al. (2018) Development of reverse genetics systems and investigation of host response antagonism and reassortment potential for Cache Valley and Kairi viruses, two emerging orthobunyaviruses of the Americas. PLoS Neglected Tropical Diseases, 12(10), e0006884. (doi:10.1371/journal.pntd.0006884) (PMID:30372452) (PMCID:PMC6245839)

McNaughton, A.L., Sreenu, V.B. , Wilkie, G., Gunson, R., Templeton, K. and Leitch, E.C.M. (2018) Prevalence of mixed genotype hepatitis C virus infections in the UK as determined by genotype‐specific PCR and deep sequencing. Journal of Viral Hepatitis, 25(5), pp. 524-534. (doi:10.1111/jvh.12849) (PMID:29274184) (PMCID:PMC5947153)

da Silva Filipe, A. et al. (2018) Reply to: "Reply to: 'Response to DAA therapy in the NHS England Early Access Programme for rare HCV subtypes from low and middle income countries'". Journal of Hepatology, 68(4), pp. 864-866. (doi:10.1016/j.jhep.2017.11.044) (PMID:29339112)

Varjak, M. , Dietrich, I., Sreenu, V. B. , Till, B. E., Merits, A., Kohl, A. and Schnettler, E. (2018) Spindle-E acts antivirally against alphaviruses in mosquito cells. Viruses, 10(2), 88. (doi:10.3390/v10020088) (PMID:29463033) (PMCID:PMC5850395)

Lourenço-de-Oliveira, R., Marques, J. T., Sreenu, V. B. , Nten, C. A., Guimarães Rocha Aguiarr, E. R., Varjak, M. , Kohl, A. and Failloux, A.-B. (2018) Culex quinquefasciatus mosquitoes do not support replication of Zika virus. Journal of General Virology, 99, pp. 258-264. (doi:10.1099/jgv.0.000949) (PMID:29076805) (PMCID:PMC5882084)

2017

da Silva Filipe, A. et al. (2017) Response to DAA therapy in the NHS England early access programme for rare HCV subtypes from low and middle income countries. Journal of Hepatology, 67(6), pp. 1348-1350. (doi:10.1016/j.jhep.2017.06.035) (PMID:28789880)

Varjak, M. , Donald, C. L. , Mottram, T. J., Sreenu, V. B. , Merits, A., Maringer, K., Schnettler, E. and Kohl, A. (2017) Characterization of the Zika virus induced small RNA response in Aedes aegypti cells. PLoS Neglected Tropical Diseases, 11(10), e0006010. (doi:10.1371/journal.pntd.0006010) (PMID:29040304) (PMCID:PMC5667879)

Varjak, M. et al. (2017) Aedes aegypti Piwi4 is a noncanonical PIWI protein involved in antiviral responses. mSphere, 2(3), 00144-17. (doi:10.1128/mSphere.00144-17) (PMID:28497119) (PMCID:PMC5415634)

2016

Schnettler, E., Sreenu, V. B. , Mottram, T. and McFarlane, M. (2016) Wolbachia restricts insect specific flavivirus infection in Aedes aegypti cells. Journal of General Virology, 97(11), pp. 3024-3029. (doi:10.1099/jgv.0.000617) (PMID:27692043) (PMCID:PMC5120408)

Thomson, E. et al. (2016) Comparison of next generation sequencing technologies for the comprehensive assessment of full-length hepatitis C viral genomes. Journal of Clinical Microbiology, 54(10), pp. 2470-2484. (doi:10.1128/JCM.00330-16) (PMID:27385709) (PMCID:PMC5035407)

Polachek, W. S., Moshrif, H. F., Franti, M., Coen, D. M., Sreenu, V. B. , Strang, B. L. and , (2016) High-throughput small interfering RNA screening identifies phosphatidylinositol 3-kinase class II alpha as important for production of human cytomegalovirus virions. Journal of Virology, 90(18), pp. 8360-8371. (doi:10.1128/JVI.01134-16) (PMID:27412598)

Jacobs, M. et al. (2016) Late Ebola virus relapse causing meningoencephalitis: a case report. Lancet, 388(10043), pp. 498-503. (doi:10.1016/S0140-6736(16)30386-5) (PMID:27209148) (PMCID:PMC4967715)

Orton, R.J. , Gu, Q., Hughes, J. , Maabar, M., Modha, S. , Vattipally, S. , Wilkie, G.S. and Davison, A. (2016) Bioinformatics tools for analysing viral genomic data. Revue scientifique et technique (International Office of Epizootics), 35(1), pp. 241-285. (doi:10.20506/rst.35.1.2432) (PMID:27217183)

2015

Gaunt, E., Harvala, H., Osterback, R., Sreenu, V. B. , Thomson, E. , Waris, M. and Simmonds, P. (2015) Genetic characterization of human coxsackievirus A6 variants associated with atypical hand, foot and mouth disease: a potential role of recombination in emergence and pathogenicity. Journal of General Virology, 96(5), pp. 1067-1079. (doi:10.1099/vir.0.000062) (PMID:25614593) (PMCID:PMC4631059)

Chang, C.-H. et al. (2015) HIV-infected sex workers with beneficial HLA-variants are potential hubs for selection of HIV-1 recombinants that may affect disease progression. Scientific Reports, 5, 11253. (doi:10.1038/srep11253) (PMID:26082240) (PMCID:PMC4469978)

2014

Tenzer, S. et al. (2014) HIV-1 adaptation to antigen processing results in population-level immune evasion and affects subtype diversification. Cell Reports, 7(2), pp. 448-463. (doi:10.1016/j.celrep.2014.03.031)

2013

Leggewie, M., Sreenu, V. B. , Abdelrahman, T., Leitch, E. C., Wilkie, G., Klymenko, T., Muir, D., Thursz, M., Main, J. and Thomson, E.C. (2013) Natural NS3 resistance polymorphisms occur frequently prior to treatment in HIV-positive patients with acute hepatitis C. AIDS, 27(15), pp. 2485-2488. (doi:10.1097/QAD.0b013e328363b1f9) (PMID:23770494)

2011

Carmo, A. M. and Sreenu, V. B. (2011) A systematic and thorough search for domains of the scavenger receptor cysteine-rich Group-B family in the human genome. In: Mahdavi, M. A. (ed.) Bioinformatics: Trends and Methodologies. InTechOpen. ISBN 9789533072821 (doi:10.5772/19462)

2009

Gonçalves, C. M. et al. (2009) Molecular cloning and analysis of SSc5D, a new member of the scavenger receptor cysteine-rich superfamily. Molecular Immunology, 46(13), pp. 2585-2596. (doi:10.1016/j.molimm.2009.05.006) (PMID:19535143)

2008

Abidi, S. H. I., Dong, T., Vuong, M. T., Sreenu, V. B. , Rowland-Jones, S. L., Evans, E. J. and Davis, S. J. (2008) Differential remodeling of a T-cell transcriptome following CD8- versus CD3-induced signaling. Cell Research, 18(6), pp. 641-648. (doi:10.1038/cr.2008.56) (PMID:18475290) (PMCID:PMC2731849)

2007

Hene, L., Sreenu, V. B. , Vuong, M. T., Abidi, S. H. I., Sutton, J. K., Rowland-Jones, S. L., Davis, S. J. and Evans, E. J. (2007) Deep analysis of cellular transcriptomes – LongSAGE versus classic MPSS. BMC Genomics, 8(1), 333. (doi:10.1186/1471-2164-8-333) (PMID:17892551) (PMCID:PMC2104538)

Sreenu, V. B. , Kumar, P., Nagaraju, J. and Nagarajaram, H. A. (2007) Simple sequence repeats in mycobacterial genomes. Journal of Biosciences, 32(1), pp. 3-15. (doi:10.1007/s12038-007-0002-7) (PMID:17426376)

2006

Sreenu, V. B. , Kumar, P., Nagaraju, J. and Nagarajaram, H. A. (2006) Microsatellite polymorphism across the M. tuberculosis and M. bovis genomes: Implications on genome evolution and plasticity. BMC Genomics, 7(1), 78. (doi:10.1186/1471-2164-7-78) (PMID:16603092) (PMCID:PMC1501019)

2005

Prasad, M.D. et al. (2005) SilkSatDb: a microsatellite database of the silkworm, Bombyx mori. Nucleic Acids Research, 33(Suppl1), D403-D406. (doi:10.1093/nar/gki099) (PMID:15608226) (PMCID:PMC540053)

Gundu, R.K., Swamynathan, S., Sreenu, V.B. , Pavan, N., Acharya, S. and Nagarajaram, H.A. (2005) Frontiers in bioinformatics research: the biodiversity issues. In: Tandon, P., Sharma, M. and Swarup, R. (eds.) Biodiversity: Status and Prospects. Narosa Publishing House: New Dehli. ISBN 9788173196768

2003

Sreenu, V. B. , Alevoor, V., Javaregowda, N. and Nagarajaram, H. A. (2003) MICdb: database of prokaryotic microsatellites. Nucleic Acids Research, 31(1), pp. 106-108. (doi:10.1093/nar/gkg002) (PMID:12519959) (PMCID:PMC165449)

Ranjitkumar, G., Pavan, M. N., Bose, B., Swaminathan, S., Geetha, T., Prashanthi, P., Prasad, B. P., Sreenu, V.B. , Achary, M. S. and Nagarajaram, H.A. (2003) EMBnet India Node (EIN) at the Centre for DNA Fingerprinting and Diagnostics: serving the Indian sub-continent in bioinformatics. Bioinformatics India, 1(2), pp. 67-77.

Sreenu, V.B. , Ranjitkumar, G., Swaminathan, S., Priya, S., Bose, B., Pavan, M.N., Thanu, G., Nagaraju, J. and Nagarajaram, H.A. (2003) MICAS: a fully automated web server for microsatellite extraction and analysis from prokaryote and viral genomic sequences. Applied Bioinformatics, 2(3), pp. 165-168. (PMID:15130803)

2002

Kamal, A., Ramesh, G., Laxman, N., Ramulu, P., Srinivas, O., Neelima, K., Kondapi, A. K., Sreenu, V.B. and Nagarajaram, H.A. (2002) Design, synthesis, and evaluation of new noncross-linking pyrrolobenzodiazepine dimers with efficient DNA binding ability and potent antitumor activity. Journal of Medicinal Chemistry, 45(21), pp. 4679-4688. (doi:10.1021/jm020124h) (PMID:12361394)

This list was generated on Sun Sep 22 18:11:43 2019 BST.
Number of items: 37.

Articles

Jerome, H. et al. (2019) Metagenomic next-generation sequencing aids the diagnosis of viral infections in febrile returning travellers. Journal of Infection, (doi:10.1016/j.jinf.2019.08.003) (PMID:31398374) (In Press)

Bamford, C., Wignall-Fleming, E., Sreenu, V. B. , Randall, R., Duprex, P. and Rima, B. (2019) Unusual, stable replicating viruses generated from mumps virus cDNA clones. PLoS ONE, 14(7), e0219168. (doi:10.1371/journal.pone.0219168) (PMID:31276568)

Wignall-Fleming, E. B., Hughes, D. J., Vattipally, S. , Modha, S. , Goodbourn, S., Davison, A. J. and Randall, R. E. (2019) Analysis of paramyxovirus transcription and replication by high-throughput sequencing. Journal of Virology, (doi:10.1128/JVI.00571-19) (PMID:31189700) (Early Online Publication)

Yen, P.-S., Chen, C.-H., Sreenu, V. , Kohl, A. and Failloux, A.-B. (2019) Assessing the potential interactions between cellular miRNA and arboviral genomic RNA in the Yellow Fever mosquito, Aedes aegypti. Viruses, 11(6), 540. (doi:10.3390/v11060540) (PMID:31185697)

Suárez, N. M. et al. (2019) Human cytomegalovirus genomes sequenced directly from clinical material: variation, multiple-strain infection, recombination and gene loss. Journal of Infectious Diseases, (PMID:31050742) (Early Online Publication)

Davis, C. et al. (2019) New highly diverse hepatitis C strains detected in sub‐Saharan Africa have unknown susceptibility to direct‐acting antiviral treatments. Hepatology, 69(4), pp. 1426-1441. (doi:10.1002/hep.30342) (PMID:30387174) (PMCID:PMC6492010)

Donald, C. L. , Varjak, M. , Aguiar, E. R. G. R., Marques, J. T., Sreenu, V. B. , Schnettler, E. and Kohl, A. (2018) Antiviral RNA interference activity in cells of the predatory mosquito, Toxorhynchites amboinensis. Viruses, 10(12), 694. (doi:10.3390/v10120694) (PMID:30563205) (PMCID:PMC6316411)

Franzke, K. et al. (2018) Detection, infection dynamics and small RNA response against Culex Y virus in mosquito-derived cells. Journal of General Virology, 99, pp. 1739-1745. (doi:10.1099/jgv.0.001173) (PMID:30394867)

Dunlop, J. I. et al. (2018) Development of reverse genetics systems and investigation of host response antagonism and reassortment potential for Cache Valley and Kairi viruses, two emerging orthobunyaviruses of the Americas. PLoS Neglected Tropical Diseases, 12(10), e0006884. (doi:10.1371/journal.pntd.0006884) (PMID:30372452) (PMCID:PMC6245839)

McNaughton, A.L., Sreenu, V.B. , Wilkie, G., Gunson, R., Templeton, K. and Leitch, E.C.M. (2018) Prevalence of mixed genotype hepatitis C virus infections in the UK as determined by genotype‐specific PCR and deep sequencing. Journal of Viral Hepatitis, 25(5), pp. 524-534. (doi:10.1111/jvh.12849) (PMID:29274184) (PMCID:PMC5947153)

da Silva Filipe, A. et al. (2018) Reply to: "Reply to: 'Response to DAA therapy in the NHS England Early Access Programme for rare HCV subtypes from low and middle income countries'". Journal of Hepatology, 68(4), pp. 864-866. (doi:10.1016/j.jhep.2017.11.044) (PMID:29339112)

Varjak, M. , Dietrich, I., Sreenu, V. B. , Till, B. E., Merits, A., Kohl, A. and Schnettler, E. (2018) Spindle-E acts antivirally against alphaviruses in mosquito cells. Viruses, 10(2), 88. (doi:10.3390/v10020088) (PMID:29463033) (PMCID:PMC5850395)

Lourenço-de-Oliveira, R., Marques, J. T., Sreenu, V. B. , Nten, C. A., Guimarães Rocha Aguiarr, E. R., Varjak, M. , Kohl, A. and Failloux, A.-B. (2018) Culex quinquefasciatus mosquitoes do not support replication of Zika virus. Journal of General Virology, 99, pp. 258-264. (doi:10.1099/jgv.0.000949) (PMID:29076805) (PMCID:PMC5882084)

da Silva Filipe, A. et al. (2017) Response to DAA therapy in the NHS England early access programme for rare HCV subtypes from low and middle income countries. Journal of Hepatology, 67(6), pp. 1348-1350. (doi:10.1016/j.jhep.2017.06.035) (PMID:28789880)

Varjak, M. , Donald, C. L. , Mottram, T. J., Sreenu, V. B. , Merits, A., Maringer, K., Schnettler, E. and Kohl, A. (2017) Characterization of the Zika virus induced small RNA response in Aedes aegypti cells. PLoS Neglected Tropical Diseases, 11(10), e0006010. (doi:10.1371/journal.pntd.0006010) (PMID:29040304) (PMCID:PMC5667879)

Varjak, M. et al. (2017) Aedes aegypti Piwi4 is a noncanonical PIWI protein involved in antiviral responses. mSphere, 2(3), 00144-17. (doi:10.1128/mSphere.00144-17) (PMID:28497119) (PMCID:PMC5415634)

Schnettler, E., Sreenu, V. B. , Mottram, T. and McFarlane, M. (2016) Wolbachia restricts insect specific flavivirus infection in Aedes aegypti cells. Journal of General Virology, 97(11), pp. 3024-3029. (doi:10.1099/jgv.0.000617) (PMID:27692043) (PMCID:PMC5120408)

Thomson, E. et al. (2016) Comparison of next generation sequencing technologies for the comprehensive assessment of full-length hepatitis C viral genomes. Journal of Clinical Microbiology, 54(10), pp. 2470-2484. (doi:10.1128/JCM.00330-16) (PMID:27385709) (PMCID:PMC5035407)

Polachek, W. S., Moshrif, H. F., Franti, M., Coen, D. M., Sreenu, V. B. , Strang, B. L. and , (2016) High-throughput small interfering RNA screening identifies phosphatidylinositol 3-kinase class II alpha as important for production of human cytomegalovirus virions. Journal of Virology, 90(18), pp. 8360-8371. (doi:10.1128/JVI.01134-16) (PMID:27412598)

Jacobs, M. et al. (2016) Late Ebola virus relapse causing meningoencephalitis: a case report. Lancet, 388(10043), pp. 498-503. (doi:10.1016/S0140-6736(16)30386-5) (PMID:27209148) (PMCID:PMC4967715)

Orton, R.J. , Gu, Q., Hughes, J. , Maabar, M., Modha, S. , Vattipally, S. , Wilkie, G.S. and Davison, A. (2016) Bioinformatics tools for analysing viral genomic data. Revue scientifique et technique (International Office of Epizootics), 35(1), pp. 241-285. (doi:10.20506/rst.35.1.2432) (PMID:27217183)

Gaunt, E., Harvala, H., Osterback, R., Sreenu, V. B. , Thomson, E. , Waris, M. and Simmonds, P. (2015) Genetic characterization of human coxsackievirus A6 variants associated with atypical hand, foot and mouth disease: a potential role of recombination in emergence and pathogenicity. Journal of General Virology, 96(5), pp. 1067-1079. (doi:10.1099/vir.0.000062) (PMID:25614593) (PMCID:PMC4631059)

Chang, C.-H. et al. (2015) HIV-infected sex workers with beneficial HLA-variants are potential hubs for selection of HIV-1 recombinants that may affect disease progression. Scientific Reports, 5, 11253. (doi:10.1038/srep11253) (PMID:26082240) (PMCID:PMC4469978)

Tenzer, S. et al. (2014) HIV-1 adaptation to antigen processing results in population-level immune evasion and affects subtype diversification. Cell Reports, 7(2), pp. 448-463. (doi:10.1016/j.celrep.2014.03.031)

Leggewie, M., Sreenu, V. B. , Abdelrahman, T., Leitch, E. C., Wilkie, G., Klymenko, T., Muir, D., Thursz, M., Main, J. and Thomson, E.C. (2013) Natural NS3 resistance polymorphisms occur frequently prior to treatment in HIV-positive patients with acute hepatitis C. AIDS, 27(15), pp. 2485-2488. (doi:10.1097/QAD.0b013e328363b1f9) (PMID:23770494)

Gonçalves, C. M. et al. (2009) Molecular cloning and analysis of SSc5D, a new member of the scavenger receptor cysteine-rich superfamily. Molecular Immunology, 46(13), pp. 2585-2596. (doi:10.1016/j.molimm.2009.05.006) (PMID:19535143)

Abidi, S. H. I., Dong, T., Vuong, M. T., Sreenu, V. B. , Rowland-Jones, S. L., Evans, E. J. and Davis, S. J. (2008) Differential remodeling of a T-cell transcriptome following CD8- versus CD3-induced signaling. Cell Research, 18(6), pp. 641-648. (doi:10.1038/cr.2008.56) (PMID:18475290) (PMCID:PMC2731849)

Hene, L., Sreenu, V. B. , Vuong, M. T., Abidi, S. H. I., Sutton, J. K., Rowland-Jones, S. L., Davis, S. J. and Evans, E. J. (2007) Deep analysis of cellular transcriptomes – LongSAGE versus classic MPSS. BMC Genomics, 8(1), 333. (doi:10.1186/1471-2164-8-333) (PMID:17892551) (PMCID:PMC2104538)

Sreenu, V. B. , Kumar, P., Nagaraju, J. and Nagarajaram, H. A. (2007) Simple sequence repeats in mycobacterial genomes. Journal of Biosciences, 32(1), pp. 3-15. (doi:10.1007/s12038-007-0002-7) (PMID:17426376)

Sreenu, V. B. , Kumar, P., Nagaraju, J. and Nagarajaram, H. A. (2006) Microsatellite polymorphism across the M. tuberculosis and M. bovis genomes: Implications on genome evolution and plasticity. BMC Genomics, 7(1), 78. (doi:10.1186/1471-2164-7-78) (PMID:16603092) (PMCID:PMC1501019)

Prasad, M.D. et al. (2005) SilkSatDb: a microsatellite database of the silkworm, Bombyx mori. Nucleic Acids Research, 33(Suppl1), D403-D406. (doi:10.1093/nar/gki099) (PMID:15608226) (PMCID:PMC540053)

Sreenu, V. B. , Alevoor, V., Javaregowda, N. and Nagarajaram, H. A. (2003) MICdb: database of prokaryotic microsatellites. Nucleic Acids Research, 31(1), pp. 106-108. (doi:10.1093/nar/gkg002) (PMID:12519959) (PMCID:PMC165449)

Ranjitkumar, G., Pavan, M. N., Bose, B., Swaminathan, S., Geetha, T., Prashanthi, P., Prasad, B. P., Sreenu, V.B. , Achary, M. S. and Nagarajaram, H.A. (2003) EMBnet India Node (EIN) at the Centre for DNA Fingerprinting and Diagnostics: serving the Indian sub-continent in bioinformatics. Bioinformatics India, 1(2), pp. 67-77.

Sreenu, V.B. , Ranjitkumar, G., Swaminathan, S., Priya, S., Bose, B., Pavan, M.N., Thanu, G., Nagaraju, J. and Nagarajaram, H.A. (2003) MICAS: a fully automated web server for microsatellite extraction and analysis from prokaryote and viral genomic sequences. Applied Bioinformatics, 2(3), pp. 165-168. (PMID:15130803)

Kamal, A., Ramesh, G., Laxman, N., Ramulu, P., Srinivas, O., Neelima, K., Kondapi, A. K., Sreenu, V.B. and Nagarajaram, H.A. (2002) Design, synthesis, and evaluation of new noncross-linking pyrrolobenzodiazepine dimers with efficient DNA binding ability and potent antitumor activity. Journal of Medicinal Chemistry, 45(21), pp. 4679-4688. (doi:10.1021/jm020124h) (PMID:12361394)

Book Sections

Carmo, A. M. and Sreenu, V. B. (2011) A systematic and thorough search for domains of the scavenger receptor cysteine-rich Group-B family in the human genome. In: Mahdavi, M. A. (ed.) Bioinformatics: Trends and Methodologies. InTechOpen. ISBN 9789533072821 (doi:10.5772/19462)

Gundu, R.K., Swamynathan, S., Sreenu, V.B. , Pavan, N., Acharya, S. and Nagarajaram, H.A. (2005) Frontiers in bioinformatics research: the biodiversity issues. In: Tandon, P., Sharma, M. and Swarup, R. (eds.) Biodiversity: Status and Prospects. Narosa Publishing House: New Dehli. ISBN 9788173196768

This list was generated on Sun Sep 22 18:11:43 2019 BST.