Dr Mads Gabrielsen

Integrated Protein Analysis Lab Lead (MVLS Research Facilities)

telephone: 01413306447
email: Mads.Gabrielsen@glasgow.ac.uk
pronouns: He/him/his

Publications

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Number of items: 40.

2025

Koszela, Joanna, Rintala-Dempsey, Anne, Salzano, Giulia, Pimenta, Viveka, Kamarainen, Outi, Gabrielsen, Mads ORCID: https://orcid.org/0000-0002-9848-2276, Parui, Aasna L. ORCID: https://orcid.org/0000-0001-7038-6875, Shaw, Gary S. and Walden, Helen ORCID: https://orcid.org/0000-0002-4289-4810 (2025) A substrate-interacting region of Parkin directs ubiquitination of the mitochondrial GTPase Miro1. Journal of Cell Biology, (Accepted for Publication)

2024

Koszela, Joanna, Rintala-Dempsey, Anne, Salzano, Giulia ORCID: https://orcid.org/0000-0001-9770-794X, Pimenta, Viveka, Kamarainen, Outi, Gabrielsen, Mads ORCID: https://orcid.org/0000-0002-9848-2276, Parui, Aasna L. ORCID: https://orcid.org/0000-0001-7038-6875, Shaw, Gary S. and Walden, Helen ORCID: https://orcid.org/0000-0002-4289-4810 (2024) A substrate-interacting region of Parkin directs ubiquitination of the mitochondrial GTPase Miro1. bioRxiv, (doi: 10.1101/2024.06.03.597144)

2023

Schmidt, T. et al. (2023) eIF4A1-dependent mRNAs employ purine-rich 5’UTR sequences to activate localised eIF4A1-unwinding through eIF4A1-multimerisation to facilitate translation. Nucleic Acids Research, 51(4), pp. 1859-1879. (doi: 10.1093/nar/gkad030) (PMID:36727461) (PMCID:PMC9976904)

2022

Zambelloni, Riccardo, Beckham, Katherine S.H., Wu, Hong-Jin, Elofsson, Mikael, Marquez, Rudi, Gabrielsen, Mads ORCID: https://orcid.org/0000-0002-9848-2276 and Roe, Andrew J. ORCID: https://orcid.org/0000-0003-3698-6134 (2022) Crystal structures of WrbA, a spurious target of the salicylidene acylhydrazide inhibitors of type III secretion in Gram-negative pathogens, and verification of improved specificity of next-generation compounds. Microbiology, 168(7), 001211. (doi: 10.1099/mic.0.001211) (PMID:35829699)

Nakasone, Mark A., Majorek, Karolina A., Gabrielsen, Mads ORCID: https://orcid.org/0000-0002-9848-2276, Sibbet, Gary J., Smith, Brian O. ORCID: https://orcid.org/0000-0003-3363-4168 and Huang, Danny T. ORCID: https://orcid.org/0000-0002-6192-259X (2022) Structure of UBE2K-Ub/E3/polyUb reveals mechanisms of K48-linked Ub chain extension. Nature Chemical Biology, 18, pp. 422-431. (doi: 10.1038/s41589-021-00952-x) (PMID:35027744) (PMCID:PMC8964413)

2021

Ahmed, Syed Feroj, Buetow, Lori, Gabrielsen, Mads ORCID: https://orcid.org/0000-0002-9848-2276, Lilla, Sergio, Sibbet, Gary J., Sumpton, David, Zanivan, Sara ORCID: https://orcid.org/0000-0002-9880-9099, Hedley, Ann, Clark, William and Huang, Danny T. ORCID: https://orcid.org/0000-0002-6192-259X (2021) E3 ligase-inactivation rewires CBL interactome to elicit oncogenesis by hijacking RTK–CBL–CIN85 axis. Oncogene, 40(12), pp. 2149-2164. (doi: 10.1038/s41388-021-01684-x) (PMID:33627783) (PMCID:PMC7994203)

2020

Chatrin, Chatrin, Gabrielsen, Mads ORCID: https://orcid.org/0000-0002-9848-2276, Buetow, Lori, Nakasone, Mark A., Ahmed, Syed F., Sumpton, David, Sibbet, Gary J., Smith, Brian O. ORCID: https://orcid.org/0000-0003-3363-4168 and Huang, Danny T. ORCID: https://orcid.org/0000-0002-6192-259X (2020) Structural insights into ADP-ribosylation of ubiquitin by Deltex family E3 ubiquitin ligases. Science Advances, 6(38), eabc0418. (doi: 10.1126/sciadv.abc0418) (PMID:32948590) (PMCID:PMC7500938)

Azmi, Liyana, Bragginton, Eilis C., Cadby, Ian T., Byron, Olwyn ORCID: https://orcid.org/0000-0001-7857-4520, Roe, Andrew J. ORCID: https://orcid.org/0000-0003-3698-6134, Lovering, Andrew L. and Gabrielsen, Mads ORCID: https://orcid.org/0000-0002-9848-2276 (2020) High-resolution structure of the alcohol dehydrogenase domain of the bifunctional bacterial enzyme AdhE. Acta Crystallographica. Section F: Structural Biology Communications, 76(9), pp. 414-421. (doi: 10.1107/S2053230X20010237)

Ahmed, Syed Feroj, Buetow, Lori, Gabrielsen, Mads ORCID: https://orcid.org/0000-0002-9848-2276, Lilla, Sergio, Chatrin, Chatrin, Sibbet, Gary J., Zanivan, Sara ORCID: https://orcid.org/0000-0002-9880-9099 and Huang, Danny T. ORCID: https://orcid.org/0000-0002-6192-259X (2020) DELTEX2 C-terminal domain recognizes and recruits ADP-ribosylated proteins for ubiquitination. Science Advances, 6(34), eabc0629. (doi: 10.1126/sciadv.abc0629) (PMID:32937373) (PMCID:PMC7442474)

2019

Ibáñez-Shimabukuro, M. et al. (2019) Structure and ligand binding of As-p18, an extracellular fatty acid binding protein from the eggs of a parasitic nematode. Bioscience Reports, 39(7), BSR2019129. (doi: 10.1042/BSR20191292) (PMID:31273060) (PMCID:PMC6646235)

Conley, Michaela J. ORCID: https://orcid.org/0000-0002-3457-1149, McElwee, Marion, Azmi, Liyana, Gabrielsen, Mads ORCID: https://orcid.org/0000-0002-9848-2276, Byron, Olwyn ORCID: https://orcid.org/0000-0001-7857-4520, Goodfellow, Ian G. and Bhella, David ORCID: https://orcid.org/0000-0003-2096-8310 (2019) Calicivirus VP2 forms a portal-like assembly following receptor engagement. Nature, 565(7739), pp. 377-381. (doi: 10.1038/s41586-018-0852-1) (PMID:30626974)

2017

Gabrielsen, Mads ORCID: https://orcid.org/0000-0002-9848-2276, Buetow, Lori, Nakasone, Mark A., Ahmed, Syed Feroj, Sibbet, Gary J., Smith, Brian O. ORCID: https://orcid.org/0000-0003-3363-4168, Zhang, Wei, Sidhu, Sachdev S. and Huang, Danny T. ORCID: https://orcid.org/0000-0002-6192-259X (2017) A general strategy for discovery of inhibitors and activators of RING and U-box E3 ligases with ubiquitin variants. Molecular Cell, 68(2), 456-470.e10. (doi: 10.1016/j.molcel.2017.09.027) (PMID:29053960) (PMCID:PMC5655547)

2016

Connolly, James P. R., Gabrielsen, Mads ORCID: https://orcid.org/0000-0002-9848-2276, Goldstone, Robert J., Grinter, Rhys, Wang, Dai, Cogdell, Richard J. ORCID: https://orcid.org/0000-0003-2119-6607, Walker, Daniel ORCID: https://orcid.org/0000-0002-4206-2942, Smith, David G. E. and Roe, Andrew J. ORCID: https://orcid.org/0000-0003-3698-6134 (2016) A highly conserved bacterial d-serine uptake system links host metabolism and virulence. PLoS Pathogens, 12(1), e1005359. (doi: 10.1371/journal.ppat.1005359) (PMID:26727373) (PMCID:PMC4699771)

2015

Mardilovich, K. et al. (2015) LIM kinase inhibitors disrupt mitotic microtubule organization and impair tumor cell proliferation. Oncotarget, 6(36), pp. 38469-38486. (doi: 10.18632/oncotarget.6288) (PMID:26540348) (PMCID:PMC4770715)

Cameron, Jenifer M., Gabrielsen, Mads ORCID: https://orcid.org/0000-0002-9848-2276, Chim, Ya Hua, Munro, June, McGhee, Ewan J., Sumpton, David, Eaton, Philip, Anderson, Kurt I., Yin, Huabing ORCID: https://orcid.org/0000-0001-7693-377X and Olson, Michael F. ORCID: https://orcid.org/0000-0003-3428-3507 (2015) Polarized cell motility induces hydrogen peroxide to inhibit cofilin via cysteine oxidation. Current Biology, 25(11), pp. 1520-1525. (doi: 10.1016/j.cub.2015.04.020)

Buetow, Lori, Gabrielsen, Mads ORCID: https://orcid.org/0000-0002-9848-2276, Anthony, Nahoum G., Dou, Hao, Patel, Amrita, Aitkenhead, Hazel, Sibbet, Gary J., Smith, Brian O. ORCID: https://orcid.org/0000-0003-3363-4168 and Huang, Danny T. ORCID: https://orcid.org/0000-0002-6192-259X (2015) Activation of a primed RING E3-E2–ubiquitin complex by non-covalent ubiquitin. Molecular Cell, 58(2), pp. 297-310. (doi: 10.1016/j.molcel.2015.02.017) (PMID:25801170)

Mardilovich, Katerina, Gabrielsen, Mads ORCID: https://orcid.org/0000-0002-9848-2276, McGarry, Lynn, Orange, Clare, Patel, Rachana, Shanks, Emma, Edwards, Joanne ORCID: https://orcid.org/0000-0002-7192-6906 and Olson, Michael F. ORCID: https://orcid.org/0000-0003-3428-3507 (2015) Elevated LIM kinase 1 in nonmetastatic prostate cancer reflects its role in facilitating androgen receptor nuclear translocation. Molecular Cancer Therapeutics, 14(1), pp. 246-258. (doi: 10.1158/1535-7163.MCT-14-0447)

2014

Gabrielsen, Mads ORCID: https://orcid.org/0000-0002-9848-2276, Abdul-Rahman, Puteri Shafinaz, Othman, Shatrah, Hashim, Onn H. and Cogdell, Richard J. ORCID: https://orcid.org/0000-0003-2119-6607 (2014) Structures and binding specificity of galactose- and mannose-binding lectins from champedak: differences from jackfruit lectins. Acta Crystallographica. Section F: Structural Biology Communications, 70(6), pp. 709-716. (doi: 10.1107/S2053230X14008966)

2013

Klejnot, M., Gabrielsen, M. ORCID: https://orcid.org/0000-0002-9848-2276, Cameron, J., Mleczak, A., Talapatra, S.K., Kozielski, F., Pannifer, A. and Olson, M.F. ORCID: https://orcid.org/0000-0003-3428-3507 (2013) Analysis of the human cofilin 1 structure reveals conformational changes required for actin binding. Acta Crystallographica. Section D: Biological Crystallography, 69(9), pp. 1780-1788. (doi: 10.1107/S0907444913014418)

Gabrielsen, M. ORCID: https://orcid.org/0000-0002-9848-2276, Roe, A.J. ORCID: https://orcid.org/0000-0003-3698-6134 and McLuskey, K. (2013) High-throughput methods for the detection of protein overexpression using fluorescence markers. Methods in Cell Biology, 113, pp. 189-208. (doi: 10.1016/B978-0-12-407239-8.00010-0)

Gabrielsen, M. ORCID: https://orcid.org/0000-0002-9848-2276, Schuldt, M., Munro, J., Borucka, D., Cameron, J., Baugh, M., Mleczak, A., Lilla, S., Morrice, N. and Olson, M.F. ORCID: https://orcid.org/0000-0003-3428-3507 (2013) Cucurbitacin covalent bonding to cysteine thiols: the filamentous-actin severing protein Cofilin1 as an exemplary target. Cell Communication and Signaling, 11(58), (doi: 10.1186/1478-811X-11-58)

2012

Gabrielsen, M. ORCID: https://orcid.org/0000-0002-9848-2276, Rey-Burusco, M.F., Griffiths, K., Roe, A.J. ORCID: https://orcid.org/0000-0003-3698-6134, Cooper, A., Smith, B.O. ORCID: https://orcid.org/0000-0003-3363-4168, Kennedy, M.W. ORCID: https://orcid.org/0000-0002-0970-5264 and Corsico, B. (2012) Two crystal forms of a helix-rich fatty acid- and retinol-binding protein, Na-FAR-1, from the parasitic nematodeNecator americanus. Acta Crystallographica. Section F: Structural Biology and Crystallization Communications, 68(7), pp. 835-838. (doi: 10.1107/S1744309112023597) (PMID:22750878) (PMCID:PMC3388935)

Beckham, Katherine S.H., Byron, Olwyn ORCID: https://orcid.org/0000-0001-7857-4520, Roe, Andrew J. ORCID: https://orcid.org/0000-0003-3698-6134 and Gabrielsen, Mads ORCID: https://orcid.org/0000-0002-9848-2276 (2012) The structure of an orthorhombic crystal form of a 'forced reduced' thiol peroxidase reveals lattice formation aided by the presence of the affinity tag. Acta Crystallographica. Section F: Structural Biology and Crystallization Communications, 68(5), pp. 522-526. (doi: 10.1107/S1744309112011487) (PMID:22691780) (PMCID:PMC3374505)

Gabrielsen, M. ORCID: https://orcid.org/0000-0002-9848-2276, Beckham, K.S., Feher, V.A., Zetterstrom, C.E., Wang, D., Muller, S., Elofsson, M., Amaro, R.E., Byron, O. ORCID: https://orcid.org/0000-0001-7857-4520 and Roe, A.J. ORCID: https://orcid.org/0000-0003-3698-6134 (2012) Structural characterisation of Tpx from yersinia pseudotuberculosis reveals insights into the binding of salicylidene acylhydrazide compounds. PLoS ONE, 7(2), e32217. (doi: 10.1371/journal.pone.0032217) (PMID:22384182) (PMCID:PMC3288085)

Gabrielsen, M. ORCID: https://orcid.org/0000-0002-9848-2276, Beckham, K.S.H., Cogdell, R.J. ORCID: https://orcid.org/0000-0003-2119-6607, Byron, O. ORCID: https://orcid.org/0000-0001-7857-4520 and Roe, A.J. ORCID: https://orcid.org/0000-0003-3698-6134 (2012) FolX from Pseudomonas aeruginosa is octameric in both crystal and solution. FEBS Letters, 586(8), pp. 1160-1165. (doi: 10.1016/j.febslet.2012.03.031) (PMID:22575651) (PMCID:PMC3405516)

Gabrielsen, M. ORCID: https://orcid.org/0000-0002-9848-2276, Beckham, K.S.H. and Roe, A.J. ORCID: https://orcid.org/0000-0003-3698-6134 (2012) High-throughput methods for the identification of protein purification conditions using a cleavable tag system. Methods in Cell Biology, 112, pp. 93-110. (doi: 10.1016/B978-0-12-405914-6.00005-6)

Gabrielsen, M. ORCID: https://orcid.org/0000-0002-9848-2276, Riboldi-Tunnicliffe, A., Ibáñez-Shimabukuro, M., Griffiths, K., Roe, A.J. ORCID: https://orcid.org/0000-0003-3698-6134, Cooper, A., Smith, B. ORCID: https://orcid.org/0000-0003-3363-4168, Córsico, B. and Kennedy, M.W. ORCID: https://orcid.org/0000-0002-0970-5264 (2012) Useable diffraction data from a multiple microdomain-containing crystal of Ascaris suum As-p18 fatty-acid-binding protein using a microfocus beamline. Acta Crystallographica. Section F: Structural Biology and Crystallization Communications, 68, pp. 939-941. (doi: 10.1107/S1744309112026553) (PMID:22869127) (PMCID:PMC3412778)

Gabrielsen, M. ORCID: https://orcid.org/0000-0002-9848-2276, Riboldi-Tunnicliffe, A., Ibáñez-Shimabukuro, M., Griffiths, K., Roe, A.J. ORCID: https://orcid.org/0000-0003-3698-6134, Cooper, A., Smith, B.O. ORCID: https://orcid.org/0000-0003-3363-4168, Córsico, B. and Kennedy, M.W. ORCID: https://orcid.org/0000-0002-0970-5264 (2012) Useable diffraction data from a multiple microdomain-containing crystal ofAscaris suumAs-p18 fatty-acid-binding protein using a microfocus beamline. Acta Crystallographica. Section F: Structural Biology and Crystallization Communications, 68(8), pp. 939-941. (doi: 10.1107/S1744309112026553) (PMID:22869127) (PMCID:PMC3412778)

Gawthorne, J.A., Reddick, L.E., Akpunarlieva, S.N., Beckham, K.S.H., Christie, J.M. ORCID: https://orcid.org/0000-0002-9976-0055, Alto, N.M., Gabrielsen, M. ORCID: https://orcid.org/0000-0002-9848-2276 and Roe, A.J. ORCID: https://orcid.org/0000-0003-3698-6134 (2012) Express your LOV: an engineered flavoprotein as a reporter for protein expression and purification. PLoS ONE, 7(12), e52962. (doi: 10.1371/journal.pone.0052962) (PMID:23300834) (PMCID:PMC3531456)

2011

Gabrielsen, M. ORCID: https://orcid.org/0000-0002-9848-2276, Kroner, F., Black, I., Isaacs, N.W., Roe, A.J. ORCID: https://orcid.org/0000-0003-3698-6134 and McLuskey, K. (2011) High-throughput identification of purification conditions leads to preliminary crystallization conditions for three inner membrane proteins. Molecular Membrane Biology, 28(7-8), pp. 445-453. (doi: 10.3109/09687688.2011.628954) (PMID:22034843)

Wang, D. et al. (2011) Identification of bacterial target proteins for the salicylidene acylhydrazide class of virulence blocking compounds. Journal of Biological Chemistry, 286(34), pp. 29922-29931. (doi: 10.1074/jbc.M111.233858) (PMID:21724850) (PMCID:PMC3191033)

2010

Gabrielsen, M. ORCID: https://orcid.org/0000-0002-9848-2276, Zetterström, C.E., Wang, D., Beckham, K.S.H., Elofsson, M., Isaacs, N.W and Roe, A. ORCID: https://orcid.org/0000-0003-3698-6134 (2010) Expression, purification, crystallization and initial X-ray diffraction analysis of thiol peroxidase from Yersinia pseudotuberculosis. Acta Crystallographica. Section F: Structural Biology and Crystallization Communications, 66(12), pp. 1606-1609. (doi: 10.1107/S1744309110039679) (PMID:21139206) (PMCID:PMC2998365)

Gabrielsen, M., Nagy, L.A., DeLucas, L.J. and Cogdell, R.J. ORCID: https://orcid.org/0000-0003-2119-6607 (2010) Self-interaction chromatography as a tool for optimizing conditions for membrane protein crystallization. Acta Crystallographica. Section D: Biological Crystallography, 66(1), pp. 44-50. (doi: 10.1107/S0907444909043972)

Gabrielsen, M. ORCID: https://orcid.org/0000-0002-9848-2276, Abdul-Rahman, P.S., Isaacs, N.W., Hashim, O.H. and Cogdell, R.J. ORCID: https://orcid.org/0000-0003-2119-6607 (2010) Crystallization and initial X-ray diffraction analysis of a mannose-binding lectin from champedak. Acta Crystallographica. Section F: Structural Biology and Crystallization Communications, 66(5), pp. 592-594. (doi: 10.1107/S1744309110011760)

2009

Baier, J., Gabrielsen, M. ORCID: https://orcid.org/0000-0002-9848-2276, Oellerich, S., Michel, H., van Heel, M., Cogdell, R.J. ORCID: https://orcid.org/0000-0003-2119-6607 and Köhler, J. (2009) Spectral Diffusion and Electron-Phonon Coupling of the B800 BChl a Molecules in LH2 Complexes from Three Different Species of Purple Bacteria. Biophysical Journal, 97(9), pp. 2604-2612. (doi: 10.1016/j.bpj.2009.07.052) (PMID:19883604) (PMCID:PMC2770615)

Gabrielsen, M., Gardiner, A.T., Fromme, P. and Cogdell, R.J. ORCID: https://orcid.org/0000-0003-2119-6607 (2009) Membrane protein crystallization: approaching the problem and understanding the solutions. Current Topics in Membranes, 63, pp. 127-149. (doi: 10.1016/S1063-5823(09)63006-4)

Gabrielsen, M., Riboldi-Tunnicliffe, A., Abdul-Rahman, P.S., Mohamed, E., Ibrahim, W.I.W., Hashim, O.H., Isaacs, N.W. and Cogdell, R.J. (2009) Crystallization and preliminary structural studies of champedak galactose-binding lectin. Acta Crystallographica. Section F: Structural Biology and Crystallization Communications, 65(9), pp. 895-897. (doi: 10.1107/S1744309109029303)

Mercer, I., El-Taha, Y., Kajumba, N., Marangos, J., Tisch, J., Gabrielsen, M. ORCID: https://orcid.org/0000-0002-9848-2276, Cogdell, R.J. ORCID: https://orcid.org/0000-0003-2119-6607, Springate, E. and Turcu, E. (2009) Instantaneous Mapping of Coherently Coupled Electronic Transitions and Energy Transfers in a Photosynthetic Complex Using Angle-Resolved Coherent Optical Wave-Mixing. Physical Review Letters, 102(5), (doi: 10.1103/PhysRevLett.102.057402)[Book Review]

2008

Cogdell, R.J. ORCID: https://orcid.org/0000-0003-2119-6607, Gardiner, A.T., Gabrielsen, M. ORCID: https://orcid.org/0000-0002-9848-2276, Southall, J., Roszak, A.W., Isaacs, N.W., Fujii, R. and Hashimoto, H. (2008) The structure of purple bacterial antenna complexes. In: Frome, P. (ed.) Photosynthetic Protein Complexes: A Structural Approach. Wiley-VCH, pp. 325-339. ISBN 9783527317301

McLuskey, K., Gabrielsen, M. ORCID: https://orcid.org/0000-0002-9848-2276, Kroner, Frank, Black, I., Cogdell, R.J. ORCID: https://orcid.org/0000-0003-2119-6607 and Isaacs, N.W. (2008) A protocol for high throughput methods for the expression and purification of inner membrane proteins. Molecular Membrane Biology, 25(8), pp. 599-608. (doi: 10.1080/09687680802510289)

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