Professor Alan Cooper

  • Honorary Senior Research Fellow (School of Chemistry)

telephone: 01413305278
email: Alan.Cooper@glasgow.ac.uk

Research interests

Publications

List by: Type | Date

Jump to: 2014 | 2013 | 2012 | 2011 | 2010 | 2009 | 2008 | 2007 | 2006 | 2005 | 2004 | 2003 | 2002 | 2001 | 2000 | 1999 | 1997 | 1996 | 1994 | 1992
Number of items: 87.

2014

Ibáñez-Shimabukuro, M., Rey-Burusco, M.F., Cooper, A., Kennedy, M. W., Córsico, B., and Smith, B. O. (2014) Resonance assignment of As-p18, a fatty acid binding protein secreted by developing larvae of the parasitic nematode Ascaris suum. Biomolecular NMR Assignments, 8(1), pp. 33-36. (doi:10.1007/s12104-012-9447-1)

Vance, S. J., McDonald, R. E., Cooper, A., Kennedy, M. W., and Smith, B. O. (2014) Resonance assignments for latherin, a natural surfactant protein from horse sweat. Biomolecular NMR Assignments, 8(1), pp. 213-216. (doi:10.1007/s12104-013-9485-3)

Rey-Burusco, M.F., Ibañez-Shimabukuro, M., Cooper, A., Kennedy, M. W., Córsico, B., and Smith, B. O. (2014) 1H, 13C and 15N chemical shift assignments of Na-FAR-1, a helix-rich fatty acid and retinol binding protein of the parasitic nematode Necator americanus. Biomolecular NMR Assignments, 8(1), pp. 19-21. (doi:10.1007/s12104-012-9444-4)

Caldwell, S.T. et al. (2014) Protein-mediated dethreading of a biotin-functionalised pseudorotaxane. Organic and Biomolecular Chemistry, 12(3), pp. 511-516. (doi:10.1039/C3OB41612G)

2013

Kennedy, M.W., Córsico, B., Cooper, A., and Smith, B.O. (2013) The unusual lipid-binding proteins of nematodes: NPAs, nemFABPs and FARs. In: Kennedy, M. and Harnett, m. (eds.) Parasitic Nematodes: Molecular Biology, Biochemistry and Immunology [2nd. ed.]. CABI; Wallingford; UK, pp. 397-412. ISBN 9781845937591 (doi:10.1079/9781845937591.0397)

Vance, S.J., McDonald, R.E., Cooper, A., Smith, B.O., and Kennedy, M.W. (2013) The structure of latherin, a surfactant allergen protein from horse sweat and saliva. Journal of The Royal Society Interface, 10(85), Art. 20130453. (doi:10.1098/rsif.2013.0453)

Zhang, H. et al. (2013) Dual-acting stapled peptides target both HIV-1 entry and assembly. Retrovirology, 10(136), (doi:10.1186/1742-4690-10-136)

2012

Roberts, G.A., Stephanou, A.S., Kanwar, N., Dawson, A., Cooper, L.P., Chen, K., Nutley, M., Cooper, A., Blakely, G.W., and Dryden, D.T.F. (2012) Exploring the DNA mimicry of the Ocr protein of phage T7. Nucleic Acids Research, 40(16), pp. 8129-8143. (doi:10.1093/nar/gks516)

Gabrielsen, M., Rey-Burusco, M.F., Griffiths, K., Roe, A.J., Cooper, A., Smith, B.O., Kennedy, M.W., and Corsico, B. (2012) Two crystal forms of a helix-rich fatty acid- and retinol-binding protein, Na-FAR-1, from the parasitic nematodeNecator americanus. Acta Crystallographica. Section F: Structural Biology and Crystallization Communications, 68(7), pp. 835-838. (doi:10.1107/S1744309112023597)

Fraga, A.S., Esteves, A.C., Micaelo, N., Cruz, P.F., Brito, R.M..M., Nutley, M., Cooper, A., Barros, M.M.T., and Pires, E.M.V. (2012) Functional and conformational changes in the aspartic protease cardosin A induced by TFE. International Journal of Biological Macromolecules, 50(2), pp. 323-330. (doi:10.1016/j.ijbiomac.2011.12.018 )

Brand, G.D., Magalhães, M.T.Q., Tinoco, M.L.P., Aragão, F.J.L., Nicoli, J., Kelly, S., Cooper, A., and Bloch Jr, C. (2012) Probing protein sequences as sources for encrypted antimicrobial peptides. PLoS ONE, 7(9), e45848. (doi:10.1371/journal.pone.0045848)

Gabrielsen, M., Riboldi-Tunnicliffe, A., Ibáñez-Shimabukuro, M., Griffiths, K., Roe, A.J., Cooper, A., Smith, B., Córsico, B., and Kennedy, M.W. (2012) Useable diffraction data from a multiple microdomain-containing crystal of Ascaris suum As-p18 fatty-acid-binding protein using a microfocus beamline. Acta Crystallographica. Section F: Structural Biology and Crystallization Communications, 68, pp. 939-941. (doi:10.1107/S1744309112026553)

Gabrielsen, M., Riboldi-Tunnicliffe, A., Ibáñez-Shimabukuro, M., Griffiths, K., Roe, A.J., Cooper, A., Smith, B.O., Córsico, B., and Kennedy, M.W. (2012) Useable diffraction data from a multiple microdomain-containing crystal ofAscaris suumAs-p18 fatty-acid-binding protein using a microfocus beamline. Acta Crystallographica. Section F: Structural Biology and Crystallization Communications, 68(8), pp. 939-941. (doi:10.1107/S1744309112026553)

2011

Antolikova, E., Zakova, L., Turkenburg, J.P., Watson, C.J., Hanclova, I., Sanda, M., Cooper, A., Kraus, T., Brzozowski, A.M., and Jiracek, J. (2011) Non-equivalent role of inter- and intramolecular hydrogen bonds in the insulin dimer interface. Journal of Biological Chemistry, 286(42), pp. 36968-36977. (doi:10.1074/jbc.M111.265249)

Vijayakrishnan, S., Callow, P., Nutley, M.A., McGow, D.P., Kropholler, P., Cooper, A., Byron, O., and Lindsay, J.G. (2011) Variation in the organization and subunit composition of the mammalian pyruvate dehydrogenase complex E2/E3BP core assembly. Biochemical Journal, 437(3), pp. 565-574. (doi:10.1042/BJ20101784)

Cooper, A. (2011) Biophysical Chemistry. Series: Tutorial Chemistry Texts, 24. Royal Society of Chemistry: Cambridge, UK. ISBN 9781849730815

Cooper, A. (2011) Microcalorimetry of heat capacity and volumetric changes in biomolecular interactions-the link to solvation? Journal of Thermal Analysis and Calorimetry, 104(1), pp. 69-73. (doi:10.1007/s10973-011-1285-3)

Meenan, N.A.G., Ball, G., Bromek, K., Uhrín, D., Cooper, A., Kennedy, M.W., and Smith, B.O. (2011) Solution structure of a repeated unit of the ABA-1 nematode polyprotein allergen of ascaris reveals a novel fold and two discrete lipid-binding sites. PLoS Neglected Tropical Diseases, 5(4), e1040. (doi:10.1371/journal.pntd.0001040)

Yong, Z., Okoro, L., Cooper, A., and Winter, R. (2011) Applications of pressure perturbation calorimetry in biophysical studies. Biophysical Chemistry, 156(1), pp. 13-23. (doi:10.1016/j.bpc.2010.12.010)

Zhang, H., Curreli, F., Xihui, Z., Bhattacharya, S., Abdul A., W., Cooper, A., Cowburn, D., Freed , E.O., and Debnath, A.K. (2011) Antiviral activity of alpha-helical stapled peptides designed from the HIV-1 capsid dimerization domain, Retrovirology. Retrovirology, 8(28), (doi:10.1186/1742-4690-8-28)

2010

Cameron, D.L., Jakus, J., Pauleta, S.R., Pettigrew, G.W., and Cooper, A. (2010) Pressure perturbation calorimetry and the thermodynamics of non-covalent interactions in water: comparison of protein-protein, protein-ligand, and cyclodextrin-adamantane complexes. Journal of Physical Chemistry B, 114(49), pp. 16228-16235. (doi:10.1021/jp107110t)

Cooper, A., and Kennedy, M.W. (2010) Biofoams and natural protein surfactants. Biophysical Chemistry, 151(3), pp. 96-104. (doi:10.1016/j.bpc.2010.06.006)

Cooper, A. (2010) Protein heat capacity: an anomaly that maybe never was. Journal of Physical Chemistry Letters, 1(22), pp. 3298-3304. (doi:10.1021/jz1012142)

2009

Stephanou, A.S., Roberts, G.A., Cooper, L.P., Clarke, D.J., Thomson, A.R., MacKay, C.L., Nutley, M., Cooper, A., and Dryden, D.T.F. (2009) Dissection of the DNA mimicry of the bacteriophage T7 Ocr protein using chemical modification. Journal of Molecular Biology, 391(3), pp. 565-576. (doi:10.1016/j.jmb.2009.06.020)

MacKenzie, C.D., Smith, B.O., Meister, A., Blume, A., Zhao, X., Lu, J.R., Kennedy, M.W., and Cooper, A. (2009) Ranaspumin-2: structure and function of a surfactant protein from the foam nests of a tropical frog. Biophysical Journal, 96(12), pp. 4984-4992. (doi:10.1016/j.bpj.2009.03.044)

Fleming, R.I., MacKenzie, C.D., Cooper, A., and Kennedy, M.W., (2009) Foam nest components of the túngara frog: a cocktail of proteins conferring physical and biological resilience. Proceedings of the Royal Society of London Series B: Biological Sciences, 276(1663), pp. 1787-1795. (doi:10.1098/rspb.2008.1939)

Tron, C.M., McNae, I.W., Nutley, M., Clarke, D.J., Cooper, A., Walkinshaw, M.D., Baxter, R.L., and Campopiano, D.J. (2009) Structural and functional studies of the biotin protein ligase from Aquifex aeolicus reveal a critical role for a conserved residue in target specificity. Journal of Molecular Biology, 387(1), pp. 129-146. (doi:10.1016/j.jmb.2008.12.086)

Stephanou, A.S., Roberts, G.A., Tock, M.R., Pritchard, E.H., Turkington, R., Nutley, M., Cooper, A., and Dryden, D.T.F. (2009) A mutational analysis of DNA mimicry by ocr, the gene 0.3 antirestriction protein of bacteriophage T7. Biochemical and Biophysical Research Communications, 378(1), pp. 129-132. (doi:10.1016/j.bbrc.2008.11.014)

Cooper, A. (2009) Physical chemistry in biology. In: Begley, T.P. (ed.) Wiley Encyclopedia of Chemical Biology. John Wiley & Sons.: Hoboken, N.J. . ISBN 9780471754770 (set)

Bigot, J. et al. (2009) LCST: a powerful tool to control complexation between a dialkoxynaphthalene-functionalised poly(N-isopropylacrylamide) and CBPQT(4+) in water. Chemical Communications(35), pp. 5266-5268. (doi:10.1039/b910856d)

Cardoso, T. et al. (2009) Acetonitrile-induced unfolding of porcine pepsin A: a proposal for a critical role of hydration structures in conformational stability. International Journal of Biological Macromolecules, 45(3), pp. 213-220. (doi:10.1016/j.ijbiomac.2009.05.006)

McDonald, R.E., Fleming, R.I., Beeley, J.G., Bovell, D.L., Lu, J.R., Zhao, X., Cooper, A., and Kennedy, M.W. (2009) Latherin: a surfactant protein of horse sweat and saliva. PLoS ONE, 4(5), e5726-.. (doi:10.1371/journal.pone.0005726)

2008

Oke, M. et al. (2008) Unusual chromophore and cross-links in ranasmurfin: a blue protein from the foam nests of a tropical frog. Angewandte Chemie (International Edition), 47(41), 7853 -7856. (doi:10.1002/anie.200802901)

Caldwell, S. T., Cooke, G., Cooper, A., Nutley, M., Rabani, G., Rotello, V., Smith, B. O., and Woisel, P. (2008) Tuneable pseudorotaxane formation between a biotin-avidin bioconjugate and CBPQT(4+). Chemical Communications(23), pp. 2650-2652. (doi:10.1039/b803856b)

Serfiotis-Mitsa, D., Roberts, G. A., Cooper, L. P., White, J. H., Nutley, M., Cooper, A., Blakely, G. W., and Dryden, D. T. F. (2008) The Orf18 Gene Product from Conjugative Transposon Tn916 Is an ArdA Antirestriction Protein that Inhibits Type I DNA Restriction-Modification Systems. Journal of Molecular Biology, 383(5), pp. 970-981. (doi:10.1016/j.jmb.2008.06.005)

2007

Guthrie, K.M., Parenty, A.D.C., Smith, L.V., Cronin, L., and Cooper, A. (2007) Microcalorimetry of interaction of dihydro-imidazo-phenanthridinium (DIP)-based compounds with duplex DNA. Biophysical Chemistry, 126(1-3), pp. 117-123. (doi:10.1016/j.bpc.2006.05.006)

Bria, M., Cooke, G., Cooper, A., Delattre, F., Hewage, S. G., Rabani, G., Nutley, M., and Woisel, P. (2007) An investigation of the complexation of a TTF derivative with alpha-, beta- and gamma-cyclodextrins in aqueous media. Tetrahedron Letters, 48(48), pp. 8430-8433. (doi:10.1016/j.tetlet.2007.09.167)

Bria, M., Cooke, G., Cooper, A., Garety, J., Hewage, S., Nutley, M., Rabani, G., and Woisel, P. (2007) An investigation of the complexation properties of cyclobis(paraquat-p-phenylene) in water. Tetrahedron Letters, 48, pp. 301-304. (doi:10.1016/j.tetlet.2006.11.003)

Cooper, A., Cameron, D., Jakus, J., and Pettigrew, G. W. (2007) Pressure perturbation calorimetry, heat capacity and the role of water in protein stability and interactions. Biochemical Society Transactions, 35(6), pp. 1547-1550. (doi:10.1042/BST0351547)

Cooper, A. (2007) Microcalorimetry and related techniques. In: Marks, R.S., Cullen, D.C., Karube, I., Lowe, C.R. and Weetall, H.H. (eds.) Handbook of Biosensors and Biochips. Wiley: Chichester, UK, pp. 659-670. ISBN 9780470019054

Lamb, H. et al. (2007) Functional analysis of the GTPases EngA and YhbZ encoded by Salmonella typhimurium. Protein Science, 16, pp. 2391-2402. (doi:10.1110/ps.072900907)

Pereira, P., Kelly, S., Cooper, A., Mardon, H., Gellert, P., and van der Walle, C. (2007) Solution formulation and lyophilisation of a recombinant fibronectin fragment. European Journal of Pharmaceutics and Biopharmaceutics, 67, pp. 309-319. (doi:10.1016/j.ejpb.2007.03.009)

2006

McMahon, S.A. et al. (2006) Crystallization of Ranasmurfin, a blue-coloured protein from Polypedates leucomystax. Acta Crystallographica. Section F: Structural Biology and Crystallization Communications, 62, pp. 1124-1126. (doi:10.1107/S1744309106040036)

Smolle, M., Prior, A.E., Brown, A.E., Cooper, A., Byron, O., and Lindsay, J.G. (2006) A new level of architectural complexity in the human pyruvate dehydrogenase complex. Journal of Biological Chemistry, 281(28), pp. 19772-19780. (doi:10.1074/jbc.M601140200)

Lamb, H., Mee, C., Xu, W., Liu, L., Blond, S., Cooper, A., Charles, I., and Hawkins, A. (2006) The affinity of a major Ca2+ binding site on GRP78 is differentially enhanced by ADP and ATP. Journal of Biological Chemistry, 281, pp. 8796-8805. (doi:10.1074/jbc.M503964200)

2005

Cooper, A., Kennedy, M.W., Fleming, R.I., Wilson, E.H., Videler, H., Wokosin, D.L., Su, T., Green, R.J., and Lu, J.R. (2005) Adsorption of frog foam nest proteins at the air-water interface. Biophysical Journal, 88(3), pp. 2114-2125. (doi:10.1529/biophysj.104.046268)

Cooper, A. (2005) Heat capacity effects in protein folding and ligand binding: a re-evaluation of the role of water in biomolecular thermodynamics. Biophysical Chemistry, 115, pp. 89-97. (doi:10.1016/j.bpc.2004.12.011)

Cooper, A., Nutley, M., MacLean, E., Cameron, K., Fielding, L., Mestres, J., and Palin, R. (2005) Mutual induced fit in cyclodextrin-rocuronium complexes. Organic and Biomolecular Chemistry, 3, pp. 1863-1871.

Meenan, N.A.G., Cooper, A., Kennedy, M.W., and Smith, B. (2005) Resonance assignment of ABA-1A, from Ascaris suum nematode polyprotein allergen. Journal of Biomolecular NMR, 32(2), p. 176. (doi:10.1007/s10858-005-6070-9)

2004

Pauleta, S.R., Cooper, A., Nutley, M., Errington, N., Harding, S., Guerlesquin, F., Goodhew, C.F., Moura, I., Moura, J.J.G., and Pettigrew, G.W. (2004) A copper protein and a cytochrome bind at the same site on bacterial cytochrome c peroxidase. Biochemistry, 43(46), pp. 14566-14576. (doi:10.1021/bi0485833)

Cooper, A. (2004) Biophysical Chemistry. Series: Tutorial Chemistry Texts, 16. Royal Society of Chemistry: Cambridge, UK. ISBN 9780854044801

Lamb, H. et al. (2004) Modulation of the ligand binding properties of the transcription repressor NmrA by GATA-containing DNA and site-directed mutagenesis. Protein Science, 13, pp. 3127-3138. (doi:10.1110/ps.04958904)

Park, A., Lamb, H., Nichols, C., Moore, J., Brown, K., Cooper, A., Charles, I., Stammers, D., and Hawkins, A. (2004) Biophysical and kinetic analysis of wild-type and site-directed mutants of the isolated and native dehydroquinate synthase domain of the AROM protein. Protein Science, 13, pp. 2108-2119. (doi:10.1110/ps.04705404)

2003

Alexeev, D. et al. (2003) Synthesis, structural and biological studies of ubiquitin mutants containing (2S, 4S)-5-fluoroleucine residues strategically placed in the hydrophobic core. ChemBioChem, 4(9), pp. 894-896. (doi:10.1002/cbic.200300699)

Garofalo, A., Rowlinson, M.C., Amambua, N.A., Hughes, J.M., Kelly, S.M., Price, N.C., Cooper, A., Watson, D.G., Kennedy, M.W., and Bradley, J.E. (2003) The FAR protein family of the nematode Caenorhabditis elegans - Differential lipid binding properties, structural characteristics, and developmental regulation. Journal of Biological Chemistry, 278, pp. 8065-8074. (doi:10.1074/jbc.M206278200)

Jung, H., Cooper, A., and Perham, R. (2003) Interactions of the peripheral subunit-binding domain of the dihydrolipoyl acetyltransferase component in the assembly of the pyruvate dehydrogenase multienzyme complex of Bacillus stearothermophilus. European Journal of Biochemistry, 270, pp. 4488-4496. (doi:10.1046/j.1432-1033.2003.03842.x)

Lamb, H., Leslie, K., Dodds, A., Nutley, M., Cooper, A., Johnson, C., Thompson, P., Stammers, D., and Hawkins, A. (2003) The negative transcriptional regulator NmrA discriminates between oxidized and reduced dinucleotides. Journal of Biological Chemistry, 278, pp. 32107-32114. (doi:10.1074/jbc.M304104200)

Pettigrew, G., Goodhew, C., Cooper, A., Nutley, M., Jumel, K., and Harding, S. (2003) The electron transfer complexes of cytochrome c peroxidase from Paracoccus denitrificans. Biochemistry, 42, pp. 2046-2055. (doi:10.1021/bi027125w)

Pettigrew, G. et al. (2003) Electron transfer complexes of cytochrome c peroxidase from Paracoccus denitrificans containing more than one cytochrome. Biochemistry, 42, pp. 11968-11981. (doi:10.1021/bi034829c)

2002

Jung, H.I., Bowden, S.J., Cooper, A., and Perham, R.N. (2002) Thermodynamic analysis of the binding of component enzymes in the assembly of the pyruvate dehydrogenase multienzyme complex of Bacillus stearothermophilus. Protein Science, 11(5), pp. 1091-1100. (doi:10.1110/ps.4970102)

Wright, E.R., McMillan, R.A., Cooper, A., Apkarian, R.P., and Conticello, V.P. (2002) Thermoplastic elastomer hydrogels via self-assembly of an elastin-mimetic triblock polypeptide. Advanced Functional Materials, 12(2), pp. 149-154. (doi:10.1002/1616-3028(20020201)12:2<149::AID-ADFM149>3.0.CO;2-N)

Cameron, D., and Cooper, A. (2002) Pressure perturbation Calorimetry of solvation changes in cyclodextrin complexes. Journal of Inclusion Phenomena and Macrocyclic Chemistry, 44, pp. 279-282.

Cameron, K., Clark, J., Cooper, A., Fielding, L., Palin, R., Rutherford, S., and Zhang, M. (2002) Modified gamma-cyclodextrins and their rocuronium complexes. Organic Letters, 4, pp. 3403-3406. (doi:10.1021/ol020126w)

Jung, H.I., Cooper, A., and Perham, R.N. (2002) Identification of key amino acid residues in the assembly of enzymes into the pyruvate dehydrogenase complex of Bacillus stearothermophilus: A kinetic and thermodynamic analysis. Biochemistry, 41(33), pp. 10446-10453. (doi:10.1021/bi020147y)

McDermott, L., Kennedy, M.W., McManus, D.P., Bradley, J.E., Cooper, A., and Storch, J. (2002) How helminth lipid-binding proteins offload their ligands to membranes: Differential mechanisms of fatty acid transfer by the ABA-1 polyprotein allergen and Ov-FAR-1 proteins of nematodes and Sj-FABPc of schistosomes. Biochemistry, 41(21), pp. 6706-6713. (doi:10.1021/bi0159635)

Semenova, E., Cooper, A., Wilson, C., and Converse, C. (2002) Stabilization of all-trans-retinol by cyclodextrins: A comparative study using HPLC and fluorescence spectroscopy. Journal of Inclusion Phenomena and Macrocyclic Chemistry, 44, pp. 155-158.

Smith, S.A., Krishnasamy, G., Murthy, K.H.M., Cooper, A., Bromek, K., Barlow, P.N., and Kotwal, G.J. (2002) Vaccinia virus complement control protein is monomeric, and retains structural and functional integrity after exposure to adverse conditions. Biochimica et Biophysica Acta: Proteins and Proteomics, 1598, pp. 55-64.

2001

Pommer, A.J. et al. (2001) Mechanism and cleavage specificity of the H-N-H endonuclease colicin E9. Journal of Molecular Biology, 314(4), pp. 735-749. (doi:10.1006/jmbi.2001.5189)

Cooper, A., Johnson, C.M., Lakey, J.H., and Nollmann, M. (2001) Heat does not come in different colours: entropy-enthalpy compensation, free energy windows, quantum confinement, pressure perturbation calorimetry, solvation and the multiple causes of heat capacity effects in biomolecular interactions. Biophysical Chemistry, 93(2-3), pp. 215-230. (doi:10.1016/S0301-4622(01)00222-8)

Kennedy, M.W., Heikema, A.P., Cooper, A., Bjorkman, P.J., and Sanchez, L.M. (2001) Hydrophobic ligand binding by Zn-alpha(2)-glycoprotein, a soluble fat-depleting factor related to major histocompatibility complex proteins. Journal of Biological Chemistry, 276(37), pp. 35008-35013. (doi:10.1074/jbc.C100301200)

Krell, T., Maclean, J., Boam, D.J., Cooper, A., Resmini, M., Brocklehurst, K., Kelly, S.M., Price, N.C., Lapthorn, A.J., and Coggins, J.R. (2001) Biochemical and X-ray crystallographic studies on shikimate kinase: the important structural role of the P-loop lysine. Protein Science, 10(6), pp. 1137-1149. (doi:10.1110/ps.52501)

Brockwell, D., Yu, L., Cooper, S., McCleland, S., Cooper, A., Attwood, D., Gaskell, S.J., and Barber, J. (2001) Physicochemical consequences of the perdeuteriation of glutathione S-transferase from S. japonicum. Protein Science, 10(3), pp. 572-580. (doi:10.1110/ps.46001)

Baxa, U., Cooper, A., Weintraub, N., Pfeil, W., and Seckler, R. (2001) Enthalpic barriers to the hydrophobic binding of oligosaccharides to phage P22 tailspike protein. Biochemistry, 40(17), pp. 5144-5150. (doi:10.1021/bi0020426)

Clarke, C., Woods, R.J., Gluska, J., Cooper, A., Nutley, M.A., and Boons, G.J. (2001) Involvement of water in carbohydrate-protein binding. Journal of the American Chemical Society, 123(49), pp. 12238-12247. (doi:10.1021/ja004315q)

Hammann, C., Cooper, A., and Lilley, D.M.J. (2001) Thermodynamics of ion-induced RNA folding in the hammerhead ribozyme: An isothermal titration calorimetric study. Biochemistry, 40(5), pp. 1423-1429. (doi:10.1021/bi002231o)

Luck, M., Griffiths, S., Gregson, K., Watson, E., Nutley, M., and Cooper, A. (2001) Follicular fluid responds endothermically to aqueous dilution. Human Reproduction, 16, pp. 2508-2514.

McDermott, L., Moore, J., Brass, A., Price, N.C., Kelly, S.M., Cooper, A., and Kennedy, M. (2001) Mutagenic and chemical modification of the ABA-1 allergen of the nematode Ascaris: Consequences for structure and lipid binding properties. Biochemistry, 40(33), pp. 9918-9926. (doi:10.1021/bi0026876)

Prior, A., Jones, J.T., Blok, V.C., Beauchamp, J., McDermott, L., Cooper, A., and Kennedy, M.W. (2001) A surface-associated retinol- and fatty acid-binding protein (Gp-FAR-1) from the potato cyst nematode Globodera pallida: lipid binding activities, structural analysis and expression pattern. Biochemical Journal, 356, pp. 387-394.

Semenova, E.M., Cooper, A., Kennedy, M.W., Wilson, C.G., and Converse, C.A. (2001) Systems for delivery of Vitamin A to the retina in retinitis pigmentosa. In: Anderson, R.E., LaVail, M.M. and Hollyfield, J.G. (eds.) New insights into retinal degenerative diseases. Kluwer Academic/Plenum Pub.,: New York, USA, pp. 105-110. ISBN 9780306466793

Xie, H.F., Bolam, D.N., Nagy, T., Szabo, L., Cooper, A., Simpson, P.J., Lakey, J.H., Williamson, M.P., and Gilbert, H.J. (2001) Role of hydrogen bonding in the interaction between a xylan binding module and xylan. Biochemistry, 40(19), pp. 5700-5707. (doi:10.1021/bi010034z)

2000

Cooper, A. (2000) Heat capacity of hydrogen-bonded networks: an alternative view of protein folding thermodynamics. Biophysical Chemistry, 85(1), pp. 25-39. (doi:10.1016/S0301-4622(00)00136-8)

1999

Cooper, A. (1999) Thermodynamic analysis of biomolecular interactions. Current Opinion in Chemical Biology, 3(5), pp. 557-563. (doi:10.1016/S1367-5931(99)00008-3)

1997

McPhail, D., and Cooper, A. (1997) Thermodynamics and kinetics of dissociation of ligand-induced dimers of vancomycin antibiotics. Journal of the Chemical Society: Faraday Transactions, 93(13), pp. 2283-2289. (doi:10.1039/a701327b)

1996

Cooper, A., Lovatt, M., and Nutley, M.A. (1996) Energetics of protein-cyclodextrin interactions. Journal of Inclusion Phenomena and Molecular Recognition in Chemistry, 25(1-3), pp. 85-88. (doi:10.1007/BF01041542)

Lovatt, M., Cooper, A., and Camilleri, P. (1996) Energetics of cyclodextrin-induced dissociation of insulin. European Biophysics Journal with Biophysics Letters, 24(5), pp. 354-357.

1994

Cooper, A., Mcalpine, A., and Stockley, P. G. (1994) Calorimetric studies of the energetics of protein—DNA interactions in the E. coli methionine repressor (MetJ) system. FEBS Letters, 348(1), pp. 41-45. (doi:10.1016/0014-5793(94)00579-6)

1992

Cooper, A. (1992) Effect of Cyclodextrins on the Thermal-Stability of Globular- Proteins. Journal of the American Chemical Society, 114(23), pp. 9208-9209.

This list was generated on Thu May 28 13:09:11 2015 BST.
Number of items: 87.

Articles

Ibáñez-Shimabukuro, M., Rey-Burusco, M.F., Cooper, A., Kennedy, M. W., Córsico, B., and Smith, B. O. (2014) Resonance assignment of As-p18, a fatty acid binding protein secreted by developing larvae of the parasitic nematode Ascaris suum. Biomolecular NMR Assignments, 8(1), pp. 33-36. (doi:10.1007/s12104-012-9447-1)

Vance, S. J., McDonald, R. E., Cooper, A., Kennedy, M. W., and Smith, B. O. (2014) Resonance assignments for latherin, a natural surfactant protein from horse sweat. Biomolecular NMR Assignments, 8(1), pp. 213-216. (doi:10.1007/s12104-013-9485-3)

Rey-Burusco, M.F., Ibañez-Shimabukuro, M., Cooper, A., Kennedy, M. W., Córsico, B., and Smith, B. O. (2014) 1H, 13C and 15N chemical shift assignments of Na-FAR-1, a helix-rich fatty acid and retinol binding protein of the parasitic nematode Necator americanus. Biomolecular NMR Assignments, 8(1), pp. 19-21. (doi:10.1007/s12104-012-9444-4)

Caldwell, S.T. et al. (2014) Protein-mediated dethreading of a biotin-functionalised pseudorotaxane. Organic and Biomolecular Chemistry, 12(3), pp. 511-516. (doi:10.1039/C3OB41612G)

Vance, S.J., McDonald, R.E., Cooper, A., Smith, B.O., and Kennedy, M.W. (2013) The structure of latherin, a surfactant allergen protein from horse sweat and saliva. Journal of The Royal Society Interface, 10(85), Art. 20130453. (doi:10.1098/rsif.2013.0453)

Zhang, H. et al. (2013) Dual-acting stapled peptides target both HIV-1 entry and assembly. Retrovirology, 10(136), (doi:10.1186/1742-4690-10-136)

Roberts, G.A., Stephanou, A.S., Kanwar, N., Dawson, A., Cooper, L.P., Chen, K., Nutley, M., Cooper, A., Blakely, G.W., and Dryden, D.T.F. (2012) Exploring the DNA mimicry of the Ocr protein of phage T7. Nucleic Acids Research, 40(16), pp. 8129-8143. (doi:10.1093/nar/gks516)

Gabrielsen, M., Rey-Burusco, M.F., Griffiths, K., Roe, A.J., Cooper, A., Smith, B.O., Kennedy, M.W., and Corsico, B. (2012) Two crystal forms of a helix-rich fatty acid- and retinol-binding protein, Na-FAR-1, from the parasitic nematodeNecator americanus. Acta Crystallographica. Section F: Structural Biology and Crystallization Communications, 68(7), pp. 835-838. (doi:10.1107/S1744309112023597)

Fraga, A.S., Esteves, A.C., Micaelo, N., Cruz, P.F., Brito, R.M..M., Nutley, M., Cooper, A., Barros, M.M.T., and Pires, E.M.V. (2012) Functional and conformational changes in the aspartic protease cardosin A induced by TFE. International Journal of Biological Macromolecules, 50(2), pp. 323-330. (doi:10.1016/j.ijbiomac.2011.12.018 )

Brand, G.D., Magalhães, M.T.Q., Tinoco, M.L.P., Aragão, F.J.L., Nicoli, J., Kelly, S., Cooper, A., and Bloch Jr, C. (2012) Probing protein sequences as sources for encrypted antimicrobial peptides. PLoS ONE, 7(9), e45848. (doi:10.1371/journal.pone.0045848)

Gabrielsen, M., Riboldi-Tunnicliffe, A., Ibáñez-Shimabukuro, M., Griffiths, K., Roe, A.J., Cooper, A., Smith, B., Córsico, B., and Kennedy, M.W. (2012) Useable diffraction data from a multiple microdomain-containing crystal of Ascaris suum As-p18 fatty-acid-binding protein using a microfocus beamline. Acta Crystallographica. Section F: Structural Biology and Crystallization Communications, 68, pp. 939-941. (doi:10.1107/S1744309112026553)

Gabrielsen, M., Riboldi-Tunnicliffe, A., Ibáñez-Shimabukuro, M., Griffiths, K., Roe, A.J., Cooper, A., Smith, B.O., Córsico, B., and Kennedy, M.W. (2012) Useable diffraction data from a multiple microdomain-containing crystal ofAscaris suumAs-p18 fatty-acid-binding protein using a microfocus beamline. Acta Crystallographica. Section F: Structural Biology and Crystallization Communications, 68(8), pp. 939-941. (doi:10.1107/S1744309112026553)

Antolikova, E., Zakova, L., Turkenburg, J.P., Watson, C.J., Hanclova, I., Sanda, M., Cooper, A., Kraus, T., Brzozowski, A.M., and Jiracek, J. (2011) Non-equivalent role of inter- and intramolecular hydrogen bonds in the insulin dimer interface. Journal of Biological Chemistry, 286(42), pp. 36968-36977. (doi:10.1074/jbc.M111.265249)

Vijayakrishnan, S., Callow, P., Nutley, M.A., McGow, D.P., Kropholler, P., Cooper, A., Byron, O., and Lindsay, J.G. (2011) Variation in the organization and subunit composition of the mammalian pyruvate dehydrogenase complex E2/E3BP core assembly. Biochemical Journal, 437(3), pp. 565-574. (doi:10.1042/BJ20101784)

Cooper, A. (2011) Microcalorimetry of heat capacity and volumetric changes in biomolecular interactions-the link to solvation? Journal of Thermal Analysis and Calorimetry, 104(1), pp. 69-73. (doi:10.1007/s10973-011-1285-3)

Meenan, N.A.G., Ball, G., Bromek, K., Uhrín, D., Cooper, A., Kennedy, M.W., and Smith, B.O. (2011) Solution structure of a repeated unit of the ABA-1 nematode polyprotein allergen of ascaris reveals a novel fold and two discrete lipid-binding sites. PLoS Neglected Tropical Diseases, 5(4), e1040. (doi:10.1371/journal.pntd.0001040)

Yong, Z., Okoro, L., Cooper, A., and Winter, R. (2011) Applications of pressure perturbation calorimetry in biophysical studies. Biophysical Chemistry, 156(1), pp. 13-23. (doi:10.1016/j.bpc.2010.12.010)

Zhang, H., Curreli, F., Xihui, Z., Bhattacharya, S., Abdul A., W., Cooper, A., Cowburn, D., Freed , E.O., and Debnath, A.K. (2011) Antiviral activity of alpha-helical stapled peptides designed from the HIV-1 capsid dimerization domain, Retrovirology. Retrovirology, 8(28), (doi:10.1186/1742-4690-8-28)

Cameron, D.L., Jakus, J., Pauleta, S.R., Pettigrew, G.W., and Cooper, A. (2010) Pressure perturbation calorimetry and the thermodynamics of non-covalent interactions in water: comparison of protein-protein, protein-ligand, and cyclodextrin-adamantane complexes. Journal of Physical Chemistry B, 114(49), pp. 16228-16235. (doi:10.1021/jp107110t)

Cooper, A., and Kennedy, M.W. (2010) Biofoams and natural protein surfactants. Biophysical Chemistry, 151(3), pp. 96-104. (doi:10.1016/j.bpc.2010.06.006)

Cooper, A. (2010) Protein heat capacity: an anomaly that maybe never was. Journal of Physical Chemistry Letters, 1(22), pp. 3298-3304. (doi:10.1021/jz1012142)

Stephanou, A.S., Roberts, G.A., Cooper, L.P., Clarke, D.J., Thomson, A.R., MacKay, C.L., Nutley, M., Cooper, A., and Dryden, D.T.F. (2009) Dissection of the DNA mimicry of the bacteriophage T7 Ocr protein using chemical modification. Journal of Molecular Biology, 391(3), pp. 565-576. (doi:10.1016/j.jmb.2009.06.020)

MacKenzie, C.D., Smith, B.O., Meister, A., Blume, A., Zhao, X., Lu, J.R., Kennedy, M.W., and Cooper, A. (2009) Ranaspumin-2: structure and function of a surfactant protein from the foam nests of a tropical frog. Biophysical Journal, 96(12), pp. 4984-4992. (doi:10.1016/j.bpj.2009.03.044)

Fleming, R.I., MacKenzie, C.D., Cooper, A., and Kennedy, M.W., (2009) Foam nest components of the túngara frog: a cocktail of proteins conferring physical and biological resilience. Proceedings of the Royal Society of London Series B: Biological Sciences, 276(1663), pp. 1787-1795. (doi:10.1098/rspb.2008.1939)

Tron, C.M., McNae, I.W., Nutley, M., Clarke, D.J., Cooper, A., Walkinshaw, M.D., Baxter, R.L., and Campopiano, D.J. (2009) Structural and functional studies of the biotin protein ligase from Aquifex aeolicus reveal a critical role for a conserved residue in target specificity. Journal of Molecular Biology, 387(1), pp. 129-146. (doi:10.1016/j.jmb.2008.12.086)

Stephanou, A.S., Roberts, G.A., Tock, M.R., Pritchard, E.H., Turkington, R., Nutley, M., Cooper, A., and Dryden, D.T.F. (2009) A mutational analysis of DNA mimicry by ocr, the gene 0.3 antirestriction protein of bacteriophage T7. Biochemical and Biophysical Research Communications, 378(1), pp. 129-132. (doi:10.1016/j.bbrc.2008.11.014)

Bigot, J. et al. (2009) LCST: a powerful tool to control complexation between a dialkoxynaphthalene-functionalised poly(N-isopropylacrylamide) and CBPQT(4+) in water. Chemical Communications(35), pp. 5266-5268. (doi:10.1039/b910856d)

Cardoso, T. et al. (2009) Acetonitrile-induced unfolding of porcine pepsin A: a proposal for a critical role of hydration structures in conformational stability. International Journal of Biological Macromolecules, 45(3), pp. 213-220. (doi:10.1016/j.ijbiomac.2009.05.006)

McDonald, R.E., Fleming, R.I., Beeley, J.G., Bovell, D.L., Lu, J.R., Zhao, X., Cooper, A., and Kennedy, M.W. (2009) Latherin: a surfactant protein of horse sweat and saliva. PLoS ONE, 4(5), e5726-.. (doi:10.1371/journal.pone.0005726)

Oke, M. et al. (2008) Unusual chromophore and cross-links in ranasmurfin: a blue protein from the foam nests of a tropical frog. Angewandte Chemie (International Edition), 47(41), 7853 -7856. (doi:10.1002/anie.200802901)

Caldwell, S. T., Cooke, G., Cooper, A., Nutley, M., Rabani, G., Rotello, V., Smith, B. O., and Woisel, P. (2008) Tuneable pseudorotaxane formation between a biotin-avidin bioconjugate and CBPQT(4+). Chemical Communications(23), pp. 2650-2652. (doi:10.1039/b803856b)

Serfiotis-Mitsa, D., Roberts, G. A., Cooper, L. P., White, J. H., Nutley, M., Cooper, A., Blakely, G. W., and Dryden, D. T. F. (2008) The Orf18 Gene Product from Conjugative Transposon Tn916 Is an ArdA Antirestriction Protein that Inhibits Type I DNA Restriction-Modification Systems. Journal of Molecular Biology, 383(5), pp. 970-981. (doi:10.1016/j.jmb.2008.06.005)

Guthrie, K.M., Parenty, A.D.C., Smith, L.V., Cronin, L., and Cooper, A. (2007) Microcalorimetry of interaction of dihydro-imidazo-phenanthridinium (DIP)-based compounds with duplex DNA. Biophysical Chemistry, 126(1-3), pp. 117-123. (doi:10.1016/j.bpc.2006.05.006)

Bria, M., Cooke, G., Cooper, A., Delattre, F., Hewage, S. G., Rabani, G., Nutley, M., and Woisel, P. (2007) An investigation of the complexation of a TTF derivative with alpha-, beta- and gamma-cyclodextrins in aqueous media. Tetrahedron Letters, 48(48), pp. 8430-8433. (doi:10.1016/j.tetlet.2007.09.167)

Bria, M., Cooke, G., Cooper, A., Garety, J., Hewage, S., Nutley, M., Rabani, G., and Woisel, P. (2007) An investigation of the complexation properties of cyclobis(paraquat-p-phenylene) in water. Tetrahedron Letters, 48, pp. 301-304. (doi:10.1016/j.tetlet.2006.11.003)

Cooper, A., Cameron, D., Jakus, J., and Pettigrew, G. W. (2007) Pressure perturbation calorimetry, heat capacity and the role of water in protein stability and interactions. Biochemical Society Transactions, 35(6), pp. 1547-1550. (doi:10.1042/BST0351547)

Lamb, H. et al. (2007) Functional analysis of the GTPases EngA and YhbZ encoded by Salmonella typhimurium. Protein Science, 16, pp. 2391-2402. (doi:10.1110/ps.072900907)

Pereira, P., Kelly, S., Cooper, A., Mardon, H., Gellert, P., and van der Walle, C. (2007) Solution formulation and lyophilisation of a recombinant fibronectin fragment. European Journal of Pharmaceutics and Biopharmaceutics, 67, pp. 309-319. (doi:10.1016/j.ejpb.2007.03.009)

McMahon, S.A. et al. (2006) Crystallization of Ranasmurfin, a blue-coloured protein from Polypedates leucomystax. Acta Crystallographica. Section F: Structural Biology and Crystallization Communications, 62, pp. 1124-1126. (doi:10.1107/S1744309106040036)

Smolle, M., Prior, A.E., Brown, A.E., Cooper, A., Byron, O., and Lindsay, J.G. (2006) A new level of architectural complexity in the human pyruvate dehydrogenase complex. Journal of Biological Chemistry, 281(28), pp. 19772-19780. (doi:10.1074/jbc.M601140200)

Lamb, H., Mee, C., Xu, W., Liu, L., Blond, S., Cooper, A., Charles, I., and Hawkins, A. (2006) The affinity of a major Ca2+ binding site on GRP78 is differentially enhanced by ADP and ATP. Journal of Biological Chemistry, 281, pp. 8796-8805. (doi:10.1074/jbc.M503964200)

Cooper, A., Kennedy, M.W., Fleming, R.I., Wilson, E.H., Videler, H., Wokosin, D.L., Su, T., Green, R.J., and Lu, J.R. (2005) Adsorption of frog foam nest proteins at the air-water interface. Biophysical Journal, 88(3), pp. 2114-2125. (doi:10.1529/biophysj.104.046268)

Cooper, A. (2005) Heat capacity effects in protein folding and ligand binding: a re-evaluation of the role of water in biomolecular thermodynamics. Biophysical Chemistry, 115, pp. 89-97. (doi:10.1016/j.bpc.2004.12.011)

Cooper, A., Nutley, M., MacLean, E., Cameron, K., Fielding, L., Mestres, J., and Palin, R. (2005) Mutual induced fit in cyclodextrin-rocuronium complexes. Organic and Biomolecular Chemistry, 3, pp. 1863-1871.

Meenan, N.A.G., Cooper, A., Kennedy, M.W., and Smith, B. (2005) Resonance assignment of ABA-1A, from Ascaris suum nematode polyprotein allergen. Journal of Biomolecular NMR, 32(2), p. 176. (doi:10.1007/s10858-005-6070-9)

Pauleta, S.R., Cooper, A., Nutley, M., Errington, N., Harding, S., Guerlesquin, F., Goodhew, C.F., Moura, I., Moura, J.J.G., and Pettigrew, G.W. (2004) A copper protein and a cytochrome bind at the same site on bacterial cytochrome c peroxidase. Biochemistry, 43(46), pp. 14566-14576. (doi:10.1021/bi0485833)

Lamb, H. et al. (2004) Modulation of the ligand binding properties of the transcription repressor NmrA by GATA-containing DNA and site-directed mutagenesis. Protein Science, 13, pp. 3127-3138. (doi:10.1110/ps.04958904)

Park, A., Lamb, H., Nichols, C., Moore, J., Brown, K., Cooper, A., Charles, I., Stammers, D., and Hawkins, A. (2004) Biophysical and kinetic analysis of wild-type and site-directed mutants of the isolated and native dehydroquinate synthase domain of the AROM protein. Protein Science, 13, pp. 2108-2119. (doi:10.1110/ps.04705404)

Alexeev, D. et al. (2003) Synthesis, structural and biological studies of ubiquitin mutants containing (2S, 4S)-5-fluoroleucine residues strategically placed in the hydrophobic core. ChemBioChem, 4(9), pp. 894-896. (doi:10.1002/cbic.200300699)

Garofalo, A., Rowlinson, M.C., Amambua, N.A., Hughes, J.M., Kelly, S.M., Price, N.C., Cooper, A., Watson, D.G., Kennedy, M.W., and Bradley, J.E. (2003) The FAR protein family of the nematode Caenorhabditis elegans - Differential lipid binding properties, structural characteristics, and developmental regulation. Journal of Biological Chemistry, 278, pp. 8065-8074. (doi:10.1074/jbc.M206278200)

Jung, H., Cooper, A., and Perham, R. (2003) Interactions of the peripheral subunit-binding domain of the dihydrolipoyl acetyltransferase component in the assembly of the pyruvate dehydrogenase multienzyme complex of Bacillus stearothermophilus. European Journal of Biochemistry, 270, pp. 4488-4496. (doi:10.1046/j.1432-1033.2003.03842.x)

Lamb, H., Leslie, K., Dodds, A., Nutley, M., Cooper, A., Johnson, C., Thompson, P., Stammers, D., and Hawkins, A. (2003) The negative transcriptional regulator NmrA discriminates between oxidized and reduced dinucleotides. Journal of Biological Chemistry, 278, pp. 32107-32114. (doi:10.1074/jbc.M304104200)

Pettigrew, G., Goodhew, C., Cooper, A., Nutley, M., Jumel, K., and Harding, S. (2003) The electron transfer complexes of cytochrome c peroxidase from Paracoccus denitrificans. Biochemistry, 42, pp. 2046-2055. (doi:10.1021/bi027125w)

Pettigrew, G. et al. (2003) Electron transfer complexes of cytochrome c peroxidase from Paracoccus denitrificans containing more than one cytochrome. Biochemistry, 42, pp. 11968-11981. (doi:10.1021/bi034829c)

Jung, H.I., Bowden, S.J., Cooper, A., and Perham, R.N. (2002) Thermodynamic analysis of the binding of component enzymes in the assembly of the pyruvate dehydrogenase multienzyme complex of Bacillus stearothermophilus. Protein Science, 11(5), pp. 1091-1100. (doi:10.1110/ps.4970102)

Wright, E.R., McMillan, R.A., Cooper, A., Apkarian, R.P., and Conticello, V.P. (2002) Thermoplastic elastomer hydrogels via self-assembly of an elastin-mimetic triblock polypeptide. Advanced Functional Materials, 12(2), pp. 149-154. (doi:10.1002/1616-3028(20020201)12:2<149::AID-ADFM149>3.0.CO;2-N)

Cameron, D., and Cooper, A. (2002) Pressure perturbation Calorimetry of solvation changes in cyclodextrin complexes. Journal of Inclusion Phenomena and Macrocyclic Chemistry, 44, pp. 279-282.

Cameron, K., Clark, J., Cooper, A., Fielding, L., Palin, R., Rutherford, S., and Zhang, M. (2002) Modified gamma-cyclodextrins and their rocuronium complexes. Organic Letters, 4, pp. 3403-3406. (doi:10.1021/ol020126w)

Jung, H.I., Cooper, A., and Perham, R.N. (2002) Identification of key amino acid residues in the assembly of enzymes into the pyruvate dehydrogenase complex of Bacillus stearothermophilus: A kinetic and thermodynamic analysis. Biochemistry, 41(33), pp. 10446-10453. (doi:10.1021/bi020147y)

McDermott, L., Kennedy, M.W., McManus, D.P., Bradley, J.E., Cooper, A., and Storch, J. (2002) How helminth lipid-binding proteins offload their ligands to membranes: Differential mechanisms of fatty acid transfer by the ABA-1 polyprotein allergen and Ov-FAR-1 proteins of nematodes and Sj-FABPc of schistosomes. Biochemistry, 41(21), pp. 6706-6713. (doi:10.1021/bi0159635)

Semenova, E., Cooper, A., Wilson, C., and Converse, C. (2002) Stabilization of all-trans-retinol by cyclodextrins: A comparative study using HPLC and fluorescence spectroscopy. Journal of Inclusion Phenomena and Macrocyclic Chemistry, 44, pp. 155-158.

Smith, S.A., Krishnasamy, G., Murthy, K.H.M., Cooper, A., Bromek, K., Barlow, P.N., and Kotwal, G.J. (2002) Vaccinia virus complement control protein is monomeric, and retains structural and functional integrity after exposure to adverse conditions. Biochimica et Biophysica Acta: Proteins and Proteomics, 1598, pp. 55-64.

Pommer, A.J. et al. (2001) Mechanism and cleavage specificity of the H-N-H endonuclease colicin E9. Journal of Molecular Biology, 314(4), pp. 735-749. (doi:10.1006/jmbi.2001.5189)

Cooper, A., Johnson, C.M., Lakey, J.H., and Nollmann, M. (2001) Heat does not come in different colours: entropy-enthalpy compensation, free energy windows, quantum confinement, pressure perturbation calorimetry, solvation and the multiple causes of heat capacity effects in biomolecular interactions. Biophysical Chemistry, 93(2-3), pp. 215-230. (doi:10.1016/S0301-4622(01)00222-8)

Kennedy, M.W., Heikema, A.P., Cooper, A., Bjorkman, P.J., and Sanchez, L.M. (2001) Hydrophobic ligand binding by Zn-alpha(2)-glycoprotein, a soluble fat-depleting factor related to major histocompatibility complex proteins. Journal of Biological Chemistry, 276(37), pp. 35008-35013. (doi:10.1074/jbc.C100301200)

Krell, T., Maclean, J., Boam, D.J., Cooper, A., Resmini, M., Brocklehurst, K., Kelly, S.M., Price, N.C., Lapthorn, A.J., and Coggins, J.R. (2001) Biochemical and X-ray crystallographic studies on shikimate kinase: the important structural role of the P-loop lysine. Protein Science, 10(6), pp. 1137-1149. (doi:10.1110/ps.52501)

Brockwell, D., Yu, L., Cooper, S., McCleland, S., Cooper, A., Attwood, D., Gaskell, S.J., and Barber, J. (2001) Physicochemical consequences of the perdeuteriation of glutathione S-transferase from S. japonicum. Protein Science, 10(3), pp. 572-580. (doi:10.1110/ps.46001)

Baxa, U., Cooper, A., Weintraub, N., Pfeil, W., and Seckler, R. (2001) Enthalpic barriers to the hydrophobic binding of oligosaccharides to phage P22 tailspike protein. Biochemistry, 40(17), pp. 5144-5150. (doi:10.1021/bi0020426)

Clarke, C., Woods, R.J., Gluska, J., Cooper, A., Nutley, M.A., and Boons, G.J. (2001) Involvement of water in carbohydrate-protein binding. Journal of the American Chemical Society, 123(49), pp. 12238-12247. (doi:10.1021/ja004315q)

Hammann, C., Cooper, A., and Lilley, D.M.J. (2001) Thermodynamics of ion-induced RNA folding in the hammerhead ribozyme: An isothermal titration calorimetric study. Biochemistry, 40(5), pp. 1423-1429. (doi:10.1021/bi002231o)

Luck, M., Griffiths, S., Gregson, K., Watson, E., Nutley, M., and Cooper, A. (2001) Follicular fluid responds endothermically to aqueous dilution. Human Reproduction, 16, pp. 2508-2514.

McDermott, L., Moore, J., Brass, A., Price, N.C., Kelly, S.M., Cooper, A., and Kennedy, M. (2001) Mutagenic and chemical modification of the ABA-1 allergen of the nematode Ascaris: Consequences for structure and lipid binding properties. Biochemistry, 40(33), pp. 9918-9926. (doi:10.1021/bi0026876)

Prior, A., Jones, J.T., Blok, V.C., Beauchamp, J., McDermott, L., Cooper, A., and Kennedy, M.W. (2001) A surface-associated retinol- and fatty acid-binding protein (Gp-FAR-1) from the potato cyst nematode Globodera pallida: lipid binding activities, structural analysis and expression pattern. Biochemical Journal, 356, pp. 387-394.

Xie, H.F., Bolam, D.N., Nagy, T., Szabo, L., Cooper, A., Simpson, P.J., Lakey, J.H., Williamson, M.P., and Gilbert, H.J. (2001) Role of hydrogen bonding in the interaction between a xylan binding module and xylan. Biochemistry, 40(19), pp. 5700-5707. (doi:10.1021/bi010034z)

Cooper, A. (2000) Heat capacity of hydrogen-bonded networks: an alternative view of protein folding thermodynamics. Biophysical Chemistry, 85(1), pp. 25-39. (doi:10.1016/S0301-4622(00)00136-8)

Cooper, A. (1999) Thermodynamic analysis of biomolecular interactions. Current Opinion in Chemical Biology, 3(5), pp. 557-563. (doi:10.1016/S1367-5931(99)00008-3)

McPhail, D., and Cooper, A. (1997) Thermodynamics and kinetics of dissociation of ligand-induced dimers of vancomycin antibiotics. Journal of the Chemical Society: Faraday Transactions, 93(13), pp. 2283-2289. (doi:10.1039/a701327b)

Cooper, A., Lovatt, M., and Nutley, M.A. (1996) Energetics of protein-cyclodextrin interactions. Journal of Inclusion Phenomena and Molecular Recognition in Chemistry, 25(1-3), pp. 85-88. (doi:10.1007/BF01041542)

Lovatt, M., Cooper, A., and Camilleri, P. (1996) Energetics of cyclodextrin-induced dissociation of insulin. European Biophysics Journal with Biophysics Letters, 24(5), pp. 354-357.

Cooper, A., Mcalpine, A., and Stockley, P. G. (1994) Calorimetric studies of the energetics of protein—DNA interactions in the E. coli methionine repressor (MetJ) system. FEBS Letters, 348(1), pp. 41-45. (doi:10.1016/0014-5793(94)00579-6)

Cooper, A. (1992) Effect of Cyclodextrins on the Thermal-Stability of Globular- Proteins. Journal of the American Chemical Society, 114(23), pp. 9208-9209.

Books

Cooper, A. (2011) Biophysical Chemistry. Series: Tutorial Chemistry Texts, 24. Royal Society of Chemistry: Cambridge, UK. ISBN 9781849730815

Cooper, A. (2004) Biophysical Chemistry. Series: Tutorial Chemistry Texts, 16. Royal Society of Chemistry: Cambridge, UK. ISBN 9780854044801

Book Sections

Kennedy, M.W., Córsico, B., Cooper, A., and Smith, B.O. (2013) The unusual lipid-binding proteins of nematodes: NPAs, nemFABPs and FARs. In: Kennedy, M. and Harnett, m. (eds.) Parasitic Nematodes: Molecular Biology, Biochemistry and Immunology [2nd. ed.]. CABI; Wallingford; UK, pp. 397-412. ISBN 9781845937591 (doi:10.1079/9781845937591.0397)

Cooper, A. (2009) Physical chemistry in biology. In: Begley, T.P. (ed.) Wiley Encyclopedia of Chemical Biology. John Wiley & Sons.: Hoboken, N.J. . ISBN 9780471754770 (set)

Cooper, A. (2007) Microcalorimetry and related techniques. In: Marks, R.S., Cullen, D.C., Karube, I., Lowe, C.R. and Weetall, H.H. (eds.) Handbook of Biosensors and Biochips. Wiley: Chichester, UK, pp. 659-670. ISBN 9780470019054

Semenova, E.M., Cooper, A., Kennedy, M.W., Wilson, C.G., and Converse, C.A. (2001) Systems for delivery of Vitamin A to the retina in retinitis pigmentosa. In: Anderson, R.E., LaVail, M.M. and Hollyfield, J.G. (eds.) New insights into retinal degenerative diseases. Kluwer Academic/Plenum Pub.,: New York, USA, pp. 105-110. ISBN 9780306466793

This list was generated on Thu May 28 13:09:11 2015 BST.