2013

Böhm, P.S., Southall, J., Cogdell, R.J., and Köhler, J. (2013) Single-molecule spectroscopy on RC-LH1 complexes of rhodopseudomonas acidophilaStrain 10050. Journal of Physical Chemistry B, 117 (11). pp. 3120-3126. ISSN 1520-6106 (doi:10.1021/jp4005218)

Grinter, R., Roszak, A.W., Cogdell, R.J., Milner, J.J., and Walker, D. (2013) The crystal structure of the lipid II-degrading bacteriocin syringacin M suggests unexpected evolutionary relationships between colicin M-like bacteriocins. Journal of Biological Chemistry . ISSN 0021-9258 (doi:10.1074/jbc.M112.400150 ) (In Press)

2012

Niedzwiedzki, D.M., Bina, D., Picken, N., Honkanen, S., Blankenship, R.E., Holten, D., and Cogdell, R.J. (2012) Spectroscopic studies of two spectral variants of light-harvesting complex 2 (LH2) from the photosynthetic purple sulfur bacterium Allochromatium vinosum. Biochimica et Biophysica Acta: BBA Bioenergetics, 1817 (9). pp. 1576-1587. ISSN 0005-2728 (doi:10.1016/j.bbabio.2012.05.009)

Kosumi, D., Maruta, S., Horibe, T., Nagaoka, Y., Fujii, R., Sugisaki, M., Cogdell, R.J., and Hashimoto, H. (2012) Ultrafast excited state dynamics of spirilloxanthin in solution and bound to core antenna complexes: identification of the S∗ and T1 states. Journal of Chemical Physics, 137 (6). 064505. ISSN 0021-9606 (doi:10.1063/1.4737129)

Sugisaki, M., Kosumi, D., Saito, K., Cogdell, R.J., and Hashimoto, H. (2012) Generation of coherently coupled vibronic oscillations in carotenoids. Physical Review B, 85 (24). p. 245408. ISSN 1098-0121 (doi:10.1103/PhysRevB.85.245408)

Edkins, A.L., Borland, G., Kelly, S.M., Cogdell, R.J., Ozanne, B.W., and Cushley, W. (2012) Analysis of the CD23-αv integrin interaction: a study with model peptides. Biochemical and Biophysical Research Communications, 422 (2). pp. 207-212. ISSN 0006-291X (doi:10.1016/j.bbrc.2012.04.076)

Luer, L., Moulisova, V., Henry, S., Polli, D., Brotosudarmo, T.H.P., Hoseinkhani, S., Brida, D., Lanzani, G., Cerullo, G., and Cogdell, R.J. (2012) Tracking energy transfer between light harvesting complex 2 and 1 in photosynthetic membranes grown under high and low illumination. Proceedings of the National Academy of Sciences of the United States of America, 109 (5). pp. 1473-1478. ISSN 0027-8424 (doi:10.1073/pnas.1113080109)

Buczynska, D., Bujak, L., Loi, M.A., Brotosudarmo, T.H.A., Cogdell, R., and Mackowski, S. (2012) Energy transfer from conjugated polymer to bacterial light-harvesting complex. Applied Physics Letters, 101 (17). p. 173703. ISSN 0003-6951 (doi:10.1063/1.4764082)

Bujak, L., Brotosudarmo, T.H.P., Czechowski, N., Olejnik, M., Ciszak, K., Litvin, R., Cogdell, R.J., Heiss, W., and Mackowski, S. (2012) Spectral dependence of fluorescence enhancement in LH2-Au nanoparticle hybrid nanostructures. Acta Physica Polonica A, 122 (2). pp. 252-254. ISSN 0587-4246

Cogdell, R.J., Gardiner, A.T., and Cronin, L. (2012) Learning from photosynthesis: how to use solar energy to make fuels. Royal Society of London Philosophical Transactions A: Mathematical, Physical and Engineering Sciences, 370 (1972). pp. 3819-3826. ISSN 1364-503X (doi:10.1098/rsta.2011.0422)

Edkins, A.L., Borland, G., Acharya, M., Cogdell, R.J., Ozanne, B.W., and Cushley, W. (2012) Differential regulation of monocyte cytokine release by αv and β2 integrins that bind CD23. Immunology, 136 (2). pp. 241-251. ISSN 0019-2805 (doi:10.1111/j.1365-2567.2012.03576.x)

Fujii, R. et al. (2012) The pigment stoichiometry in a chlorophyll a/c type photosynthetic antenna. Photosynthesis Research, 111 (1-2). pp. 165-172. ISSN 0166-8595 (doi:10.1007/s11120-011-9698-1)

Fujii, R., Kita, M., Iinuma, Y., Oka, N., Takaesu, Y., Taira, T., Iha, M., Cogdell, R.J., and Hashimoto, H. (2012) Isolation and purification of the major photosynthetic antenna, fucoxanthin-Chl a/c protein, from cultured discoid germilings of the brown Alga, Cladosiphon okamuranus TOKIDA (Okinawa Mozuku). Photosynthesis Research, 111 (1-2). pp. 157-163. ISSN 0166-8595 (doi:10.1007/s11120-011-9688-3)

Gabrielsen, M., Beckham, K.S.H., Cogdell, R.J., Byron, O., and Roe, A.J. (2012) FolX from Pseudomonas aeruginosa is octameric in both crystal and solution. FEBS Letters, 586 (8). pp. 1160-1165. ISSN 0014-5793 (doi:10.1016/j.febslet.2012.03.031)

Kitson, S.M., Mullen, W., Cogdell, R.J., Bill, R.M., and Fraser, N.J. (2012) GPCR production in a novel yeast strain that makes cholesterol-like sterols. Methods, 55 (4). pp. 287-292. ISSN 1046-2023 (doi:10.1016/j.ymeth.2011.09.023)

Kondo, M. et al. (2012) Photocurrent and electronic activities of oriented-his-tagged photosynthetic light-harvesting/reaction center core complexes assembled onto a gold electrode. Biomacromolecules, 13 (2). pp. 432-438. ISSN 1525-7797 (doi:10.1021/bm201457s)

Kunz, R., Timpmann, K., Southall, J., Cogdell, R.J., Freiberg, A., and Köhler, J. (2012) Exciton self trapping in photosynthetic pigment–protein complexes studied by single-molecule spectroscopy. Journal of Physical Chemistry B, 116 (36). pp. 11017-11023. ISSN 1520-6106 (doi:10.1021/jp3040456)

2011

Cao, Z., Tavender, T.J., Roszak, A.W., Cogdell, R.J., and Bulleid, N.J. (2011) Crystal structure of reduced and of oxidized peroxiredoxin IV enzyme reveals a stable oxidized decamer and a non-disulfide-bonded intermediate in the catalytic cycle. Journal of Biological Chemistry, 286 (49). pp. 42257-42266. ISSN 0021-9258 (doi:10.1074/jbc.M111.298810)

Beyer, S.R., Ullrich, S., Kudera, S., Gardiner, A.T., Cogdell, R.J., and Köhler, J. (2011) Hybrid nanostructures for enhanced light-harvesting: plasmon induced increase in fluorescence from individual photosynthetic pigment–protein complexes. Nano Letters, 11 (11). pp. 4897-4901. ISSN 1530-6984 (doi:10.1021/nl202772h)

Pflock, T.J., Oellerich, S., Southall, J., Cogdell, R.J., Ullmann, G.M., and Köhler, J. (2011) The electronically excited states of LH2 complexes from Rhodopseudomonas acidophila strain 10050 studied by time-resolved spectroscopy and dynamic Monte Carlo simulations. I. Isolated, non-interacting LH2 complexes. Journal of Physical Chemistry B, 115 (28). pp. 8813-8820. ISSN 1520-6106 (doi:10.1021/jp202353c)

Brotosudarmo, T.H.P., Collins, A.M., Gall, A., Roszak, A.W., Gardiner, A.T., Blankenship, R.E., and Cogdell, R.J. (2011) The light intensity under which cells are grown controls the type of peripheral light-harvesting complexes that are assembled in a purple photosynthetic bacterium. Biochemical Journal, 440 (1). pp. 51-61. ISSN 0264-6021 (doi:10.1042/BJ20110575)

Bujak, Ł., Czechowski, N., Piatkowski, D., Litvin, R., Mackowski, S., Brotosudarmo, T.H.P., Cogdell, R.J., Pichler, S., and Heiss, W. (2011) Fluorescence enhancement of light-harvesting complex 2 from purple bacteria coupled to spherical gold nanoparticles. Applied Physics Letters, 99 (17). p. 173701. ISSN 0003-6951 (doi:10.1063/1.3648113)

Cogdell, R.J., Gardiner, A.T., Roszak, A.W., Stončius, S., Kočovský, P., and Isaacs, N.W. (2011) Mapping lipid and detergent molecules at the surface of membrane protein. Biochemical Society Transactions, 39 . pp. 775-779. ISSN 0300-5127 (doi:10.1042/BST0390775)

Janosi, L., Keer, H., Cogdell, R.J., Ritz, T., and Kosztin, L. (2011) In silico predictions of LH2 ring sizes from the crystal structure of a single subunit using molecular dynamics simulations. Proteins: Structure Function and Bioinformatics, 79 (7). pp. 2306-2315. ISSN 0887-3585 (doi:10.1002/prot.23056)

Kosumi, D., Maruta, S., Horibe, T., Fujii, R., Sugisaki, M., Cogdell, R.J., and Hashimoto, H. (2011) Ultrafast energy-transfer pathway in a purple-bacterial photosynthetic core antenna, as revealed by femtosecond time-resolved spectroscopy. Angewandte Chemie (International Edition), 50 (5). pp. 1097-1100. ISSN 1433-7851 (doi:10.1002/anie.201003771)

Kusumoto, T., Kosumi, D., Uragami, C., Frank, H.A., Birge, R.R., Cogdell, R.J., and Hashimoto, H. (2011) Femtosecond transient absorption spectroscopic study of a carbonyl-containing carotenoid analogue, 2-(all-trans-retinylidene)-indan-1,3-dione. Journal of Physical Chemistry A, 115 (11). pp. 2110-2119. ISSN 1089-5639 (doi:10.1021/jp111313f)

Maruta, S., Kosumi, D., Horibe, T., Fujii, R., Sugisaki, M., Cogdell, R.J., and Hashimoto, H. (2011) The dependence of excitation energy transfer pathways on conjugation length of carotenoids in purple bacterial photosynthetic antennae. Physica Status Solidi (b), 248 (2). pp. 403-407. ISSN 0370-1972 (doi:10.1002/pssb.201000687)

Mitchell, S.G. et al. (2011) A mixed-valence manganese cubane trapped by inequivalent trilacunary polyoxometalate ligands. Angewandte Chemie (International Edition), 50 (39). pp. 9154-9157. ISSN 1433-7851 (doi:10.1002/anie.201102727)

Pflock, T.J., Oellerich, S., Krapf, L., Southall, J., Cogdell, R.J., Ullmann, G.m., and Köhler, J. (2011) The Electronically Excited States of LH2 Complexes from Rhodopseudomonas acidophila Strain 10050 Studied by Time-Resolved Spectroscopy and Dynamic Monte Carlo Simulations. II. Homo-Arrays Of LH2 Complexes Reconstituted Into Phospholipid Model Membranes. Journal of Physical Chemistry B, 115 (28). pp. 8821-8831. ISSN 1520-6106 (doi:10.1021/jp2023583)

Saito, K., Yanagi, K., Cogdell, R.J., and Hashimoto, H. (2011) A comparison of the Liptay theory of electroabsorption spectroscopy with the sum-over-state model and its modification for the degenerate case. Journal of Chemical Physics, 134 (4). 044138. ISSN 0021-9606 (doi:10.1063/1.3524339)

Sugisaki, M., Kosumi, D., Saito, K., Cogdell, R.J., and Hashimoto, H. (2011) Control of coherent vibronic oscillations in β-carotene by ultrashort laser pulses. Physica Status Solidi C, 8 (1). pp. 151-154. ISSN 1862-6351 (doi:10.1002/pssc.201000679)

Sumino, A et al. (2011) Construction and Structural Analysis of Tethered Lipid Bilayer Containing Photosynthetic Antenna Proteins for Functional Analysis. Biomacromolecules, 12 (7). pp. 2850-2858. ISSN 1525-7797 (doi:10.1021/bm200585y)

Sumino, A., Dewa, T., Kondo, M., Morii, T., Hashimoto, H., Gardiner, A.T., Cogdell, R.J., and Nango, M. (2011) Selective assembly of photosynthetic antenna proteins into a domain-structured lipid bilayer for the construction of artificial photosynthetic antenna systems: structural analysis of the assembly using surface plasmon resonance and atomic force microscopy. Langmuir, 27 (3). pp. 1092-1099. ISSN 0743-7463 (doi:10.1021/la103281q)

Unterkofler, S., Pflock, T., Southall, J., Cogdell, R.J., and Köhler, J. (2011) Fluorescence blinking of the RC-LH1 complex from Rhodopseudomonas palustris. ChemPhysChem, 12 (3). pp. 711-716. ISSN 1439-4235 (doi:10.1002/cphc.201000588)

2010

Rosnes, M.H., Musumeci, C., Pradeep, C.P., Mathieson, J.S., Long, D.L., Song, Y., Pignataro, B., Cogdell, R.J., and Cronin, L. (2010) Assembly of modular asymmetric organic-inorganic polyoxometalate hybrids into anisotropic nanostructures. Journal of the American Chemical Society, 132 (44). pp. 15490-15492. ISSN 0002-7863 (doi:10.1021/ja1066338)

Gabrielsen, M., Nagy, L.A., DeLucas, L.J., and Cogdell, R.J. (2010) Self-interaction chromatography as a tool for optimizing conditions for membrane protein crystallization. Acta Crystallographica. Section D: Biological Crystallography, 66 (1). pp. 44-50. ISSN 0907-4449 (doi:10.1107/S0907444909043972)

Cogdell, R.J., Brotosudarmo, T.H.P., Gardiner, A.T., Sanchez, P.M., and Cronin, L. (2010) Artificial photosynthesis – solar fuels: current status and future prospects. Biofuels, 1 (6). pp. 861-876. ISSN 1759-7269 (doi:10.4155/bfs.10.62)

Fujiwara, M., Maruyama, M., Sugisaki, M., Takahashi, H., Aoshima, S., Cogdell, R.J., and Hashimoto, H. (2010) Erratum: “Determination of thed-Tensor Components of a Single Crystal ofN-Benzyl-2-methyl-4-nitroaniline". Japanese Journal of Applied Physics, 49 (11). 119201-.. ISSN 0021-4922 (doi:10.1143/JJAP.49.119201)

Gabrielsen, M., Abdul-Rahman, P.S., Isaacs, N.W., Hashim, O.H., and Cogdell, R.J. (2010) Crystallization and initial X-ray diffraction analysis of a mannose-binding lectin from champedak. Acta Crystallographica. Section F: Structural Biology and Crystallization Communications, 66 (5). pp. 592-594. ISSN 1744-3091 (doi:10.1107/S1744309110011760)

Jailaubekov, A.E., Song, S-H, Vengris, M., Cogdell, R.J., and Larsen, D.S. (2010) Using narrowband excitation to confirm that the S∗ state in carotenoids is not a vibrationally-excited ground state species. Chemical Physics Letters, 487 (1-3). pp. 101-107. ISSN 0009-2614 (doi:10.1016/j.cplett.2010.01.014)

Kosumi, Daisuke, Abe, Kenta, Karasawa, Hiroshi, Fujiwara, Masazumi, Cogdell, R.J., Hashimoto, Hideki, and Yoshizawa, Masayuki (2010) Ultrafast relaxation kinetics of the dark S1 state in all-trans-β-carotene explored by one- and two-photon pump–probe spectroscopy. Chemical Physics, 373 (1-2). pp. 33-37. ISSN 0301-0104 (doi:10.1016/j.chemphys.2009.12.013)

Kusumoto, Toshiyuki, Horibe, Tomoko, Kajikawa, Takayuki, Hasegawa, Shinji, Iwashita, Takashi, Cogdell, R.J., Birge, Robert R., Frank, Harry A., Katsumura, Shigeo, and Hashimoto, Hideki (2010) Stark absorption spectroscopy of peridinin and allene-modified analogues. Chemical Physics, 373 (1-2). pp. 71-79. ISSN 0301-0104 (doi:10.1016/j.chemphys.2010.01.018)

Sugisaki, Mitsuru, Fujiwara, Masazumi, Kosumi, Daisuke, Fujii, Ritsuko, Nango, Mamoru, Cogdell, R.J., and Hashimoto, Hideki (2010) Comparison of transient grating signals from spheroidene in an organic solvent and in pigment-protein complexes from Rhodobacter sphaeroides 2.4.1. Physical Review B, 81 (245112). pp. 1-10. ISSN 1098-0121 (doi:10.1103/PhysRevB.81.245112)

2009

Moulisova, V., Luer, L., Hoseinkhani, S., Brotosudarmo, T.H.P., Collins, A.M., Lanzani, G., Blankenship, R.E., and Cogdell, R.J. (2009) Low light adaptation: energy transfer processes in different types of light harvesting complexes from Rhodopseudomonas palustris. Biophysical Journal, 97 (11). pp. 3019-3028. ISSN 0006-3495 (doi:10.1016/j.bpj.2009.09.023 )

Fujiwara, M., Sugisaki, M., Gall, A., Robert, B., Cogdell, R.J., and Hashimoto, H. (2009) Ultrafast optical responses of beta-carotene and lycopene probed by sub-20 fs time-resolved coherent spectroscopy. Journal of Luminescence, 129 (12). pp. 1808-1812. ISSN 0022-2313 (doi:10.1016/j.jlumin.2009.04.098)

Sugisaki, M., Fujiwara, M., Fujii, R., Nakagawa, K., Nango, M., Cogdell, R.J., and Hashimoto, H. (2009) Transient grating spectroscopy in photosynthetic purple bacteria Rhodobacter sphaeroides 2.4.1. Journal of Luminescence, 192 (12). pp. 1908-1911. ISSN 0022-2313 (doi:10.1016/j.jlumin.2009.01.027)

Sugisaki, M., Fujiwara, M., Nair, S.V., Ruda, H.E., Cogdell, R.J., and Hashimoto, H. (2009) Excitation-energy dependence of transient grating spectroscopy in beta-carotene. Physical Review B, 80 (3). 035118-035128. ISSN 1098-0121 (doi:10.1103/PhysRevB.80.035118)

Kosumi, D., Fujiwara, M., Fujii, R., Cogdell, R.J., Hashimoto, H., and Yoshizawa, M. (2009) The dependence of the ultrafast relaxation kinetics of the S₂ and S₁ states in ^beta-carotene homologs and lycopene on conjugation length studied by femtosecond time-resolved absorption and Kerr-gate fluorescence spectroscopies. Journal of Chemical Physics, 130 (21). pp. 214506-214508. ISSN 0021-9606 (doi:10.1063/1.3147008 )

Fujiwara, M., Yamauchi, K., Sugisaki, M., Yanagi, K., Gall, A., Bruno, R., Cogdell, R.J., and Hashimoto, H. (2009) Third-order optical nonlinearity of [beta]-carotene homologues. Physica Status Solidi C, 6 (S1). S31-S33. ISSN 1862-6351 (doi:10.1002/pssc.200881296)

Baier, J., Gabrielsen, M., Oellerich, S., Michel, H., van Heel, M., Cogdell, R.J., and Köhler, J. (2009) Spectral Diffusion and Electron-Phonon Coupling of the B800 BChl a Molecules in LH2 Complexes from Three Different Species of Purple Bacteria. Biophysical Journal, 97 (9). pp. 2604-2612. ISSN 0006-3495 (doi:10.1016/j.bpj.2009.07.052)

Brotosudarmo, T.H.P., Kunz, R., Bohm, P., Gardiner, A.T., Moulisov , V., Cogdell, R.J., and Kohler, J. (2009) Single-molecule spectroscopy reveals that individual low-light lh2 complexes from Rhodopseudomonas palustris 2.1.6. have a heterogeneous polypeptide composition. Biophysical Journal, 97 (5). pp. 1491-1500. ISSN 0006-3495 (doi:10.1016/j.bpj.2009.06.034)

Cogdell, R.J., and Kohler, J. (2009) Use of single-molecule spectroscopy to tackle fundamental problems in biochemistry: using studies on purple bacterial antenna complexes as an example. Biochemical Journal, 422 (2). pp. 193-205. ISSN 0264-6021

Gabrielsen, M., Gardiner, A.T., Fromme, P., and Cogdell, R.J. (2009) Membrane protein crystallization: approaching the problem and understanding the solutions. Current Topics in Membranes, 63 . pp. 127-149. ISSN 1063-5823 (doi:10.1016/S1063-5823(09)63006-4)

Gabrielsen, M., Riboldi-Tunnicliffe, A., Abdul-Rahman, P.S., Mohamed, E., Ibrahim, W.I.W., Hashim, O.H., Isaacs, N.W., and Cogdell, R.J. (2009) Crystallization and preliminary structural studies of champedak galactose-binding lectin. Acta Crystallographica. Section F: Structural Biology and Crystallization Communications, 65 (9). pp. 895-897. ISSN 1744-3091 (doi:10.1107/S1744309109029303 )

Kosumi, D., Fujiwara, M., Fujii, R., Cogdell, R.J., Hashimoto, H., and Yoshizawa, M. (2009) The dependence of the ultrafast relaxation kinetics of the S-2 and S-1 states in beta-carotene homologs and lycopene on conjugation length studied by femtosecond time-resolved absorption and Kerr-gate fluorescence spectroscopies. Journal of Chemical Physics, 130 (21). 214506 . ISSN 0021-9606 (doi:10.1063/1.3147008)

Mercer, I., El-Taha, Y., Kajumba, N., Marangos, J., Tisch, J., Gabrielsen, M., Cogdell, R.J., Springate, E., and Turcu, E. (2009) Instantaneous Mapping of Coherently Coupled Electronic Transitions and Energy Transfers in a Photosynthetic Complex Using Angle-Resolved Coherent Optical Wave-Mixing. Physical Review Letters, 102 (5). ISSN 0031-9007 (doi:10.1103/PhysRevLett.102.057402)

Mikayama, T., Iida, K., Suemori, Y., Dewa, T., Miyashita, T., Nango, M., Gardiner, A.T., and Cogdell, R.J. (2009) The Electronic Behavior of a Photosynthetic Reaction Center Monitored by Conductive Atomic Force Microscopy. Journal of Nanoscience and Nanotechnology, 9 (1). pp. 97-107. ISSN 1533-4880 (doi:10.1166/jnn.2009.J084)

2008

Cogdell, R.J. (2008) Overview of the work of the BBSRC's Membrane Protein Structure initiative. Molecular Membrane Biology, 25 (8). pp. 585-587. ISSN 0968-7688 (doi:10.1080/09687680802502492)

Wöhri, A.B. et al. (2008) A lipidic-sponge phase screen for membrane protein crystallization. Structure, 16 (7). pp. 1003-1009. ISSN 0969-2126 (doi:10.1016/j.str.2008.06.003)

Fujii, R., Shimonaka, S., Uchida, N., Gardiner, A.T., Cogdell, R.J., Sugisaki, M., and Hashimoto, H. (2008) Construction of hybrid photosynthetic units using peripheral and core antennae from two different species of photosynthetic bacteria: detection of the energy transfer from bacteriochlorophyll a in LH2 to bacteriochlorophyll b in LH1. Photosynthesis Research, 95 (2-3). pp. 327-337. ISSN 0166-8595 (doi:10.1007/s11120-007-9260-3)

Herbert, R.A., Gall, A., Maoka, T., Cogdell, R.J., Robert, B., Takaichi, S., and Schwabe, S. (2008) Phototrophic purple sulfur bacteria as heat engines in the South Andros Black Hole. Photosynthesis Research, 95 (2-3). pp. 261-268. ISSN 0166-8595 (doi:10.1007/s11120-007-9246-1)

Baier, J., Richter, M.F., Cogdell, R.J., Oellerich, S., and Köhler, J. (2008) Determination of the spectral diffusion kernel of a protein by single-molecule spectroscopy. Physical Review Letters, 100 (1). 018108. ISSN 0031-9007 (doi:10.1103/PhysRevLett.100.018108)

Cogdell, R.J., Gardiner, A.T., Gabrielsen, M., Southall, J., Roszak, A.W., Isaacs, N.W., Fujii, R., and Hashimoto, H. (2008) The structure of purple bacterial antenna complexes. In: Frome, P. (ed.) Photosynthetic Protein Complexes: A Structural Approach. Wiley-VCH, pp. 325-339. ISBN 9783527317301

Cogdell, R.J., Gardiner, A.T., Hashimoto, H., and Brotosudarmo, T.H.P (2008) A comparative look at the first few milliseconds of the light reactions of photosynthesis. Photochemical and Photobiological Sciences, 7 (10). pp. 1150-1158. ISSN 1474-905X (doi:10.1039/b807201a)

Cogdell, R.J., and Mullineaux, C. (2008) Photosynthetic light harvesting - introduction. Photosynthesis Research, 95 (2-3). p. 117. ISSN 0166-8595 (doi:10.1007/s11120-007-9270-1)

Cong, H., Niedzwiedzki, D.M., Gibson, G.N., LaFountain, A.M., Kelsh, R.M., Gardiner, A.T., Cogdell, R.J., and Frank, H.A. (2008) Ultrafast time-resolved carotenoid to-bacteriochlorophyll energy transfer in LH2 complexes from photosynthetic bacteria. Journal of Physical Chemistry B, 112 (34). pp. 10689-10703. ISSN 1520-6106 (doi:10.1021/jp711946w)

Fujiwara, M., Yamauchi, K., Sugisaki, M., Gall, A., Robert, B., Cogdell, R.J., and Hashimoto, H. (2008) Energy dissipation in the ground-state vibrational manifolds of beta-carotene homologues: a sub-20-fs time-resolved transient grating spectroscopic study. Physical Review B, 77 (20). p. 205118. ISSN 1098-0121 (doi:10.1103/PhysRevB.77.205118)

Fujiwara, M., Yamauchi, K., Sugisaki, M., Yanagi, K., Gall, A., Robert, B., Cogdell, R.J., and Hashimoto, H. (2008) Large third-order optical nonlinearity realized in symmetric nonpolar carotenoids. Physical Review B, 78 (16). 161101 . ISSN 1098-0121 (doi:10.1103/PhysRevB.78.161101)

McLuskey, K., Gabrielsen, M., Kroner, Frank, Black, I., Cogdell, R.J., and Isaacs, N.W. (2008) A protocol for high throughput methods for the expression and purification of inner membrane proteins. Molecular Membrane Biology, 25 (8). pp. 599-608. ISSN 0968-7688 (doi:10.1080/09687680802510289)

Nakagawa, K., Suzuki, S., Fujii, R., Gardiner, A.T., Cogdell, R.J., Nango, M., and Hashimoto, H. (2008) Probing the Effect of the Binding Site on the Electrostatic Behavior of a Series of Carotenoids Reconstituted into the Light-Harvesting 1 Complex from Purple Photosynthetic Bacterium Rhodospirillum rubrum Detected by Stark Spectroscopy. Journal of Physical Chemistry B, 112 (31). pp. 9467-9475. ISSN 1520-6106 (doi:10.1021/jp801773j)

Nakagawa, Katsunori, Suzuki, Satoru, Fujii, Ritsuko, Gardiner, A.T., Cogdell, R.J., Nango, Mamoru, and Hashimoto, Hideki (2008) Probing binding site of bacteriochlorophyll a and carotenoid in the reconstituted LH1 complex from Rhodospirillum rubrum S1 by Stark spectroscopy. Photosynthesis Research, 95 (2-3). pp. 339-344. ISSN 0166-8595 (doi:10.1007/s11120-007-9261-2)

Pflock, Tobias, Dezi, Manuela, Venturoli, Giovanni, Cogdell, R.J., Köhler, Jürgen, and Oellerich, Silke (2008) Comparison of the fluorescence kinetics of detergent-solubilized and membrane-reconstituted LH2 complexes from Rps. acidophila and Rb. sphaeroides. Photosynthesis Research, 95 (2-3). pp. 291-298. ISSN 0166-8595 (doi:10.1007/s11120-007-9245-2)

Richter, Martin F., Baier, Jürgen, Southall, J., Cogdell, R.J., Oellerich, Silke, and Köhler, Jürgen (2008) Spectral diffusion of the lowest exciton component in the core complex from Rhodopseudomonas palustris studied by single-molecule spectroscopy. Photosynthesis Research, 95 (2-3). pp. 285-290. ISSN 0166-8595 (doi:10.1007/s11120-007-9267-9)

Sugisaki, Mitsuru, Fujii, Ritsuko, Cogdell, R.J., and Hashimoto, Hideki (2008) Linear and nonlinear optical responses in bacteriochlorophyll a. Photosynthesis Research, 95 (2-3). pp. 309-316. ISSN 0166-8595 (doi:10.1007/s11120-007-9266-x)

Sugisaki, Mitsuru, Fujiwara, Masazumi, Yanagi, Kazuhiro, Cogdell, R.J., and Hashimoto, Hideki (2008) Four-wave mixing signals from β-carotene and its n = 15 homologue. Photosynthesis Research, 95 (2-3). pp. 299-308. ISSN 0166-8595 (doi:10.1007/s11120-007-9265-y)

2007

de Ruijter, W.P.F., Segura, J.M., Cogdell, R.J., Gardiner, A.T., Oellerich, S., and Aartsma, T.J. (2007) Fluorescence-emission spectroscopy of individual LH2 and LH3 complexes. Chemical Physics, 341 (39508). pp. 320-325. ISSN 0301-0104 (doi:10.1016/j.chemphys.2007.07.050)

Pflock, T., Dezi, M., Venturoli, G., Cogdell, R.J., Köhler, J., and Oellerich, S. (2007) Comparison of the fluorescence kinetics of detergent-solubilized and membrane-reconstituted LH2 complexes from Rps. acidophila and Rb. sphaeroides. Photosynthesis Research, 95 (2-3). pp. 291-298. ISSN 0166-8595 (doi:10.1007/s11120-007-9245-2)

Richter, M.F., Baier, J., Southall, J., Cogdell, R.J., Oellerich, S., and Kohler, J. (2007) Spectral diffusion of the lowest exciton component in the core complex from Rhodopseudomonas palustris studied by single-molecule spectroscopy. Photosynthesis Research, 95 (2-3). pp. 285-290. ISSN 0166-8595 (doi:10.1007/s11120-007-9267-9)

Sugisaki, M., Fujii, R., Cogdell, R.J., and ashimoto, H.; (2007) Linear and nonlinear optical responses in bacteriochlorophyll a. Photosynthesis Research, 95 (2-3). pp. 309-316. ISSN 0166-8595 (doi:10.1007/s11120-007-9266-x)

Sugisaki, M., Fujiwara, M., Yanagi, K., Cogdell, R.J., and Hashimoto, H. (2007) Four-wave mixing signals from β-carotene and its n = 15 homologue. Photosynthesis Research, 95 (2-3). pp. 299-308. ISSN 0166-8595 (doi:10.1007/s11120-007-9265-y)

Fujii, R., Shimonaka, S., Uchida, N., Gardiner, A.T., Cogdell, R.J., Sugisaki, M., and Hashimoto, H. (2007) Construction of hybrid photosynthetic units using peripheral and core antennae from two different species of photosynthetic bacteria: detection of the energy transfer from bacteriochlorophyll a in LH2 to bacteriochlorophyll b in LH1. Photosynthesis Research, 95 (2-3). pp. 327-337. ISSN 0166-8595 (doi:10.1007/s11120-007-9260-3)

Richter, M.F., Baier, J., Prem, T., Oellerich, S., Francia, F., Venturoli, G., Oesterhelt, D., Southall, J., Cogdell, R., and Köhler, J. (2007) Symmetry matters for the electronic structure of core complexes from Rhodopseudomonas palustris and Rhodobacter sphaeroides PufX⁻. Proceedings of the National Academy of Sciences of the United States of America, 104 (16). pp. 6661-6665. ISSN 1091-6490 (doi:10.1073/pnas.0611115104 )

Arellano, J.B., Yousef, Y.A., Melo, T.B., Mohamad, S.B.B., Cogdell, R.J., and Naqvi, K.R. (2007) Formation and geminate quenching of singlet oxygen in purple bacterial reaction center. Journal of Photochemistry and Photobiology B: Biology, 87 . pp. 105-112. (doi:10.1016/j.jphotobiol.2007.03.004)

Baier, J., Richter, M.F., Cogdell, R.J., Oellerich, S., and Kohler, J. (2007) Do proteins at low temperature behave as glasses? A single-molecule study. Journal of Physical Chemistry B, 111 . pp. 1135-1138. ISSN 1554-8929 (doi:10.1021/jp0674569)

Cogdell, R (2007) Refinement of the x-ray structure of the RC LH1 core complex from Rhodopseudomonas palustris by single-molecule spectroscopy. Proceedings of the National Academy of Sciences, 104 (51). pp. 20280-20284. (doi:10.1073/pnas.0704599105)

Fujiwara, M., Maruyama, M., Sugisaki, M., Takahashi, H., Aoshima, S.I., Cogdell, R.J., and Hashimoto, H. (2007) Determination of the d-tensor components of a single crystal of N-benzyl-2-methyl-4-nitroaniline. Japanese Journal of Applied Physics Part 1: Regular Papers Brief Communications and Review Papers, 46 . pp. 1528-1530. (doi:10.1143/JJAP.46.1528)

Kondo, M, Nakamura, Y, Fujii, K, Nagata, M, Suemori, Y, Dewa, T, Lida, K, Gardiner, AT, Cogdell, RJ, and Nango, M (2007) Self-assembled monolayer of light-harvesting core complexes from photosynthetic bacteria on a gold electrode modified with alkanethiols. Biomacromolecules, 8 . pp. 2457-2463. (doi:10.1021/bm070352z)

Richter, M.F., Baier, J., Prem, T., Oellerich, S., Francia, F., Venturoli, G., Oesterhelt, D., Southall, J., Cogdell, R.J., and Kohler, J. (2007) Symmetry matters for the electronic structure of core complexes from Rhodopseudomonas palustris and Rhodobacter sphaeroides PufX(-). Proceedings of the National Academy of Sciences of the United States of America, 104 . pp. 6661-6665. ISSN 0027-8424 (doi:10.1073/pnas.0611115104)

Richter, MF, Baier, J, Cogdell, RJ, Kohler, J, and Oellerich, S (2007) Single-molecule spectroscopic characterization of light-harvesting 2 complexes reconstituted into model membranes. Biophysical Journal, 93 . pp. 183-191. (doi:10.1529/biophysj.106.103606)

Roszak, A.W., Gardiner, A.T., Isaacs, N.W., and Cogdell, R.J. (2007) Brominated lipids identify lipid binding sites on the surface of the reaction center from Rhodobacter sphaeroides. Biochemistry, 46 (11). pp. 2909-2916. ISSN 0006-2979 (doi:10.1021/bi062154i)

Sugisaki, M, Yanagi, K, Cogdell, RJ, and Hashimoto, H (2007) Unified explanation for linear and nonlinear optical responses in beta-carotene: A sub-20-fs degenerate four-wave mixing spectroscopic study. Physical Review B, 75 . ISSN 1098-0121 (doi:10.1103/PhysRevB.75.155110)

Szakonyi, G et al. (2007) A genomic strategy for cloning, expressing and purifying efflux proteins of the major facilitator superfamily. Journal of Antimicrobial Chemotherapy, 59 . pp. 1265-1270. (doi:10.1093/jac/dkm036)

2006

Polli, D., Cerullo, G., Lanzani, G., De Silvestri, S., Hashimoto, H., and Cogdell, R.J. (2006) Carotenoid-bacteriochlorophyll energy transfer in LH2 complexes studied with 10-fs time resolution. Biophysical Journal, 90 (7). pp. 2486-2497.

Rutkauskas, D., Novoderezhkin, V., Gall, A., Olsen, J., Cogdell, R.J., Hunter, C.N., and van Grondelle, R. (2006) Spectral trends in the fluorescence of single bacterial light-harvesting complexes: experiments and modified redfield simulations. Biophysical Journal, 90 (7). pp. 2475-2485. (doi:10.1529/biophysj.105.075903)

Rutkauskas, D., Olsen, J., Gall, A., Cogdell, R.J., Hunter, C.N., and van Grondelle, R. (2006) Comparative study of spectral flexibilities of bacterial light-harvesting complexes: structural implications. Biophysical Journal, 90 (7). pp. 2463-2474. (doi:10.1529%2Fbiophysj.105.075895)

Cogdell, R.J., Southall, J., Gardiner, A.T., Law, C.J., Gall, A., Roszak, A.W., and Isaacs, N.W. (2006) How purple photosynthetic bacteria harvest solar energy. Comptes Rendus Chimie, 9 (2). pp. 201-206. ISSN 1631-0748 (doi:10.1016/j.crci.2005.03.035)

Cogdell, RJ (2006) The structural basis of non-photochemical quenching is revealed? Trends in Plant Science, 11 . pp. 59-60. (doi:10.1016/j.tplants.2005.12.002)

Cogdell, RJ, Gall, A, and Kohler, J (2006) The architecture and function of the light-harvesting apparatus of purple bacteria: from single molecules to in vivo membranes. Quarterly Reviews of Biophysics, 39 . pp. 227-324. ISSN 0033-5835 (doi:10.1017/S0033583506004434)

Dewa, T, Sugiura, R, Suemori, Y, Sugimoto, M, Takeuchi, T, Hiro, A, Iida, K, Gardiner, AT, Cogdell, RJ, and Nango, M (2006) Lateral organization of a membrane protein in a supported binary lipid domain: Direct observation of the organization of bacterial light-harvesting complex 2 by total internal reflection fluorescence microscopy. Langmuir, 22 . pp. 5412-5418. (doi:10.1021/la060275d)

Gall, A, Gardiner, AT, Cogdell, RJ, and Robert, B (2006) Carotenoid stoichiometry in the LH2 crystal: No spectral evidence for the presence of the second molecule in the alpha/beta-apoprotein dimer. Febs Letters, 580 . pp. 3841-3844. (doi:10.1016/j.febslet.2006.06.005)

Hashimoto, H. et al. (2006) Structures and functions of carotenoids bound to reaction centers from purple photosynthetic bacteria. Pure and Applied Chemistry, 78 (8). pp. 1505-1518. ISSN 0033-4545 (doi:10.1351/pac200678081505)

Ketelaars, M, Segura, JM, Oellerich, S, de Ruijter, WPF, Magis, G, Aartsma, TJ, Matsushita, M, Schmidt, J, Cogdell, RJ, and Kohler, J (2006) Probing the electronic structure and conformational flexibility of individual light-harvesting 3 complexes by optical single-molecule spectroscopy. Journal of Physical Chemistry B, 110 . pp. 18710-18717. ISSN 978-1-4020-8249-8 (doi:10.1021/jp061236d)

Papagiannakis, E, Vengris, M, Valkunas, L, Cogdell, RJ, van Grondelle, R, and Larsen, DS (2006) Excited-state dynamics of carotenoids in light-harvesting complexes. 2. Dissecting pulse structures from optimal control experiments. Journal of Physical Chemistry B, 110 . pp. 5737-5746. (doi:10.1021/jp054634+)

Papagiannakis, E, van Stokkum, IHM, Vengris, M, Cogdell, RJ, van Grondelle, R, and Larsen, DS (2006) Excited-state dynamics of carotenoids in light-harvesting complexes. 1. Exploring the relationship between the S-1 and S* states. Journal of Physical Chemistry B, 110 . pp. 5727-5736. (doi:10.1021/jp054633h)

Rutkauskas, D, Cogdell, RJ, and van Grondelle, R (2006) Conformational relaxation of single bacterial light-harvesting complexes. Biochemistry, 45 . pp. 1082-1086. (doi:10.1021/bi0524159)

Suemori, Y et al. (2006) Self-assembled monolayer of light-harvesting core complexes of photosynthetic bacteria on an amino-terminated ITO electrode. Photosynthesis Research, 90 . pp. 17-21. (doi:10.1007/s11120-006-9101-9)

Wadsten, P, Wohri, AB, Snijder, A, Katona, G, Gardiner, AT, Cogdell, RJ, Neutze, R, and Engstrom, S (2006) Lipidic sponge phase crystallization of membrane proteins. Journal of Molecular Biology, 364 . pp. 44-53. (doi:10.1016/j.jmb.2006.06.043)

Zigmantas, D., Read, E.L., Mancal, T., Brixner, T., Gardiner, A.T., Cogdell, R.J., and Fleming, G.R. (2006) Two-dimensional electronic spectroscopy of the B800-B820 light-harvesting complex. Proceedings of the National Academy of Sciences of the United States of America, 103 . pp. 12672-12677. ISSN 0027-8424 (doi:10.1073/pnas.0602961103)

2005

Fujii, R, Kusumoto, T, Sashima, T, Cogdell, RJ, Gardiner, AT, and Hashimoto, H (2005) Sub-mu-second time-resolved absorption spectroscopy of a polar carotenoid analogue, 2-(all-trans-retinylidene)indan-1,3-dione;Formation of the dication by direct triplet-excited sensitization. Journal of Physical Chemistry A, 109 . pp. 11117-11122. (doi:10.1021/jp054436i)

Gall, A, Henry, S, Takaichi, S, Robert, B, and Cogdell, RJ (2005) Preferential incorporation of coloured-carotenoids occurs in the LH2 complexes from non-sulphur purple bacteria under carotenoid-limiting conditions. Photosynthesis Research, 86 . pp. 25-35. (doi:10.1007/s11120-005-3481-0)

Law, C.J., Gardiner, A.T., Southall, J., Roszak, A.W., Howard, T.D., Isaacs, N.W., and Cogdell, R.J. (2005) How purple bacteria harvest light energy. In: Andrews, D.L. (ed.) Energy Harvesting Materials. World Scientific Publishing. ISBN 9789812564122

Rutkauskas, D, Novoderezhkin, V, Cogdell, RJ, and van Grondelle, R (2005) Fluorescence spectroscopy of conformational changes of single LH2 complexes. Biophysical Journal, 88 . pp. 422-435. (doi:10.1529/biophysj.104.048629)

Yanagi, K, Gardiner, AT, Cogdell, RJ, and Hashimoto, H (2005) Electroabsorption spectroscopy of beta-carotene homologs: Anomalous enhancement of Delta mu. Physical Review B, 71 . ISSN 1098-0121 (doi:10.1103/PhysRevB.71.195118)

Yanagi, K., Shimizu, M., Hashimoto, H., Gardiner, A.T., Roszak, A.W., and Cogdell, R.J. (2005) Local electrostatic field induced by the carotenoid bound to the reaction center of the purple photosynthetic bacterium Rhodobacter sphaeroides. Journal of Physical Chemistry B, 109 (2). pp. 992-998. ISSN 1520-6106 (doi:10.1021/jp046929d)

van Gammeren, AJ, Buda, F, Hulsbergen, FB, Kiihne, S, Hollander, JG, Egorova-Zachernyuk, TA, Fraser, NJ, Cogdell, RJ, and de Groot, HJM (2005) Selective chemical shift assignment of B800 and B850 bacteriochlorophylls in uniformly [C-13,N-15]-labeled light-harvesting complexes by solid-state NMR spectroscopy at ultra-high magnetic field. Journal of the American Chemical Society, 127 . pp. 3213-3219. (doi:10.1021/ja044215a)

2004

Arellano, JB, Melo, TB, Fyfe, PK, Cogdell, RJ, and Naqvi, KR (2004) Multichannel flash spectroscopy of the reaction centers of wild-type and mutant Rhodobacter sphaeroides: Bacteriochlorophll(B)-mediated interaction between the carotenoid triplet and the special pair. Photochemistry and Photobiology, 79 . pp. 68-75.

Cogdell, R.J., Gardiner, A.T., Roszak, A.W., Law, C.J., Southall, J., and Isaacs, N.W. (2004) Rings, ellipses and horseshoes: how purple bacteria harvest solar energy. Photosynthesis Research, 81 (3). pp. 207-214. ISSN 0166-8595 (doi:10.1023/B:PRES.0000036883.56959.a9)

Cogdell, RJ, Hashimoto, H, and Gardiner, AT (2004) Purple bacterial light-harvesting complexes: from dreams to structures. Photosynthesis Research, 80 . 173-+.

Fyfe, P.K., Isaacs, N.W., Cogdell, R.J., and Jones, M.R. (2004) Disruption of a specific molecular interaction with a bound lipid affects the thermal stability of the purple bacterial reaction centre. Biochimica et Biophysica Act: Bioenergetics, 1608 . pp. 11-22. (doi:10.1016/j.bbabio.2003.09.014)

Hashimoto, H, Yanagi, K, Yoshizawa, M, Polli, D, Cerullo, G, Lanzani, G, De Silvestri, S, Gardiner, AT, and Cogdell, RJ (2004) The very early events following photoexcitation of carotenoids. Archives of Biochemistry and Biophysics, 430 . pp. 61-69. (doi:10.1016/j.abb.2004.04.022)

Herek, JL, Wendling, M, He, Z, Polivka, T, Garcia-Asua, G, Cogdell, RJ, Hunter, CN, van Grondelle, R, Sundstrom, V, and Pullerits, T (2004) Ultrafast carotenoid band shifts: Experiment and theory. Journal of Physical Chemistry B, 108 . pp. 10398-10403. (doi:10.1021/jp040094p)

Law, C.J., Roszak, A.W., Southall, J., Gardiner, A.T., Isaacs, N.W., and Cogdell, R.J. (2004) The structure and function of bacterial light-harvesting complexes (Review). Molecular Membrane Biology, 21 (3). pp. 183-191. ISSN 0968-7688 (doi:10.1080/09687680410001697224)

Ogawa, M, Shinohara, K, Nakamura, Y, Suemori, Y, Nagata, M, Iida, K, Gardiner, AT, Cogdell, RJ, and Nango, M (2004) Self-assembled monolayer of light-harvesting 1 and reaction center (LH1-RC) complexes isolated from Rhodospirillum rubrum on an amino-terminated ITO electrode. Chemistry Letters, 33 . pp. 772-773. (doi:10.1246/cl.2004.772)

Polivka, T, Pullerits, T, Frank, HA, Cogdell, RJ, and Sundstrom, V (2004) Ultrafast formation of a carotenoid radical in LH2 antenna complexes of purple bacteria. Journal of Physical Chemistry B, 108 . pp. 15398-15407. (doi:10.1021/jp0483019)

Polli, D, Cerullo, G, Lanzani, G, De Silvestri, S, Yanagi, K, Hashimoto, H, and Cogdell, RJ (2004) Conjugation length dependence of internal conversion in carotenoids: Role of the intermediate state. Physical Review Letters, 93 . ISSN 0031-9007 (doi:10.1103/PhysRevLett.93.163002)

Rondonuwu, FS, Yokoyama, K, Fujii, R, Koyama, Y, Cogdell, RJ, and Watanabe, Y (2004) The role of the 1(1)B(u)(-) state in carotenoid-to-bacteriochlorophyll singlet-energy transfer in the LH2 antenna complexes from Rhodobacter sphaeroides G1C, Rhodobacter sphaeroides 2.4.1, Rhodospirillum molischianum and Rhodopseudomonas acidophila. Chemical Physics Letters, 390 . pp. 314-322. (doi:10.1016/j.cplett.2004.03.089)

Roszak, A.W., McKendrick, K., Gardiner, A.T., Mitchell, I.A., Isaacs, N.W., Cogdell, R.J., Hashimoto, H., and Frank, H.A. (2004) Protein regulation of carotenoid binding: Gatekeeper and locking amino acid residues in reaction centers of Rhodobacter sphaeroides. Structure, 12 . pp. 765-773. ISSN 0969-2126 (doi:10.1016/j.str.2004.02.037)

Rutkauskas, D, Novoderezkhin, V, Cogdell, RJ, and van Grondelle, R (2004) Fluorescence spectral fluctuations of single LH2 complexes from Rhodopseudomonas acidophila strain 10050. Biochemistry, 43 . pp. 4431-4438. (doi:10.1021/bi0497648)

Schubert, A, Stenstam, A, Beenken, WJD, Herek, JL, Cogdell, R, Pullerits, T, and Sundstrom, V (2004) In vitro self-assembly of the light harvesting pigment-protein LH2 revealed by ultrafast spectroscopy and electron microscopy. Biophysical Journal, 86 . pp. 2363-2373.

Stamouli, A, Frenken, JWM, Oosterkamp, TH, Cogdell, RJ, and Aartsma, TJ (2004) The electron conduction of photosynthetic protein complexes embedded in a membrane. Febs Letters, 560 . pp. 109-114. (doi:10.1016/S0014-5793(04)0080-8)

Wohlleben, W, Buckup, T, Hashimoto, H, Cogdell, RJ, Herek, JL, and Motzkus, M (2004) Pump-deplete-probe spectroscopy and the puzzle of carotenoid dark states. Journal of Physical Chemistry B, 108 . pp. 3320-3325. (doi:10.1021/jp036145k)

Yanagi, K, Gardiner, AT, Cogdell, RJ, and Hashimoto, H (2004) Effect of inhomogeneous band broadening on the nonlinear optical properties of hydrazones. Physical Review B, 69 . ISSN 1098-0121 (doi:10.1103/PhysRevB.69.205103)

Yanagi, K, Hashimoto, H, Gardiner, AT, and Cogdell, RJ (2004) Stark spectroscopy on the LH2 complex from Rhodobacter sphaeroides strain G1C;frequency and temperature dependence. Journal of Physical Chemistry B, 108 . pp. 10334-10339. (doi:10.1021/jp037863+)

2003

Roszak, A.W., Howard, T.D., Southall, J., Gardiner, A.T., Law, C.J., Isaacs, N.W., and Cogdell, R.J. (2003) Crystal structure of the RC-LH1 core complex from Rhodopseudomonas palustris. Science, 302 (5652 ). pp. 1969-1972. ISSN 0036-8075 (doi: 10.1126/science.1088892 )

Cogdell, RJ, Isaacs, NW, Freer, AA, Howard, TD, Gardiner, AT, Prince, SM, and Papiz, MZ (2003) The structural basis of light-harvesting in purple bacteria. Febs Letters, 555 . pp. 35-39. (doi:10.1016/S0014-5793(03)01102-5)

Gall, A, Cogdell, RJ, and Robert, B (2003) Influence of carotenoid molecules on the structure of the bacteriochlorophyll binding site in peripheral light-harvesting proteins from Rhodobacter sphaeroides. Biochemistry, 42 . pp. 7252-7258. (doi:10.1021/bi0268293)

Gall, A, Ellervee, A, Sturgis, JN, Fraser, NJ, Cogdell, RJ, Freiberg, A, and Robert, B (2003) Membrane protein stability: High pressure effects on the structure and chromophore-binding properties of the light-harvesting complex LH2. Biochemistry, 42 . pp. 13019-13026. (doi:10.1021/bi0350351)

Moser, CC, Page, CC, Cogdell, RJ, Barber, J, Wraight, CA, and Dutton, PL (2003) Length, time, and energy scales of photosystems. Membrane Proteins, 63 . pp. 71-109.

Papiz, MZ, Prince, SM, Howard, T, Cogdell, RJ, and Isaacs, NW (2003) The structure and thermal motion of the B800-850 LH2 complex from Rps. acidophila at 2.0 (A)over-circle resolution and 100 K: New structural features and functionally relevant motions. Journal of Molecular Biology, 326 . pp. 1523-1538. (doi:10.1016/S0022-2836(03)00024-X)

Polli, D, Cerullo, G, Lanzani, G, De Silvestri, S, Hashimoto, H, and Cogdell, RJ (2003) Excited-state dynamics of carotenoids with different conjugation length. Synthetic Metals, 139 . pp. 893-896. (doi:10.1016/S0379-6779(03)00248-0)

Prince, SM, Howard, TD, Myles, DAA, Wilkinson, C, Papiz, MZ, Freer, AA, Cogdell, RJ, and Isaacs, NW (2003) Detergent structure in crystals of the integral membrane light-harvesting complex LH2 from Rhodopseudomonas acidophila strain 10050. Journal of Molecular Biology, 326 . pp. 307-315. (doi:10.1016/S0022-2836(02)01361-X)

Stamouli, A, Kafi, S, Klein, DCG, Oosterkamp, TH, Frenken, JWM, Cogdell, RJ, and Aartsma, TJ (2003) The ring structure and organization of light harvesting 2 complexes in a reconstituted lipid bilayer, resolved by atomic force microscopy. Biophysical Journal, 84 . pp. 2483-2491.

Wohlleben, W, Buckup, T, Herek, JL, Cogdell, RJ, and Motzkus, M (2003) Multichannel carotenoid deactivation in photosynthetic light harvesting as identified by an evolutionary target analysis. Biophysical Journal, 85 . pp. 442-450.

van Mourik, F, Frese, RN, van der Zwan, G, Cogdell, RJ, and van Grondelle, R (2003) Direct observation of solvation dynamics and dielectric relaxation in the photosynthetic light-harvesting-2 complex of Rhodopseudomonas acidophila. Journal of Physical Chemistry B, 107 . pp. 2156-2161. (doi:10.1021/jp026726u)

2002

Cerullo, G, Polli, D, Lanzani, G, De Silvestri, S, Hashimoto, H, and Cogdell, RJ (2002) Photosynthetic light harvesting by carotenoids: Detection of an intermediate excited state. Science, 298 . pp. 2395-2398.

Cogdell, RJ, Howard, TD, Isaacs, NW, McLuskey, K, and Gardiner, AT (2002) Structural factors which control the position of the Q(y) absorption band of bacteriochlorophyll a in purple bacterial antenna complexes. Photosynthesis Research, 74 . pp. 135-141.

Garcia-Asua, G, Cogdell, RJ, and Hunter, CN (2002) Functional assembly of the foreign carotenoid lycopene into the photosynthetic apparatus of Rhodobacter sphaeroides, achieved by replacement of the native 3-step phytoene desaturase with its 4-step counterpart from Erwinia herbicola. Molecular Microbiology, 44 . pp. 233-244.

Georgakopoulou, S, Frese, RN, Johnson, E, Koolhaas, C, Cogdell, RJ, van Grondelle, R, and van der Zwan, G (2002) Absorption and CD spectroscopy and modeling of various LH2 complexes from purple bacteria. Biophysical Journal, 82 . pp. 2184-2197.

Herek, JL, Wohlleben, W, Cogdell, RJ, Zeidler, D, and Motzkus, M (2002) Quantum control of energy flow in light harvesting. Nature, 417 . pp. 533-535.

Jones, M.R., Fyfe, P.K., Roszak, A.W., Isaacs, N.W., and Cogdell, R.J. (2002) Protein-lipid interactions in the purple bacterial reaction centre. Biochimica et Biophysica Acta: BBA Biomembranes, 1565 (2). pp. 206-214. ISSN 0005-2736 (doi:10.1016/S0005-2736(02)00570-9)

Ketelaars, M, Hofmann, C, Kohler, J, Howard, TD, Cogdell, RJ, Schmidt, J, and Aartsma, TJ (2002) Spectroscopy on individual light-harvesting 1 complexes of Rhodopseudomonas acidophila. Biophysical Journal, 83 . pp. 1701-1715.

Papagiannakis, E, Kennis, JTM, van Stokkum, IHM, Cogdell, RJ, and van Grondelle, R (2002) An alternative carotenoid-to-bacteriochlorophyll energy transfer pathway in photosynthetic light harvesting. Proceedings of the National Academy of Sciences of the United States of America, 99 . pp. 6017-6022. (doi:10.1073/pnas.092626599)

Polivka, T, Zigmantas, D, Herek, JL, He, Z, Pascher, T, Pullerits, T, Cogdell, RJ, Frank, HA, and Sundstrom, V (2002) The carotenoid S-1 state in LH2 complexes from purple bacteria Rhodobacter sphaeroides and Rhodopseudomonas acidophila: S-1 energies, dynamics, and carotenoid radical formation. Journal of Physical Chemistry B, 106 . pp. 11016-11025. (doi:10.1021/jp025752p)

Russell, N.J., Coleman, J.K., Howard, T.D., Johnston, E., and Cogdell, R.J. (2002) Rhodopseudomonas acidophila strain 10050 contains photosynthetic LH2 antenna complexes that are not enriched with phosphatidylglycerol, and the phospholipids have a fatty acyl composition that is unusual for purple non-sulfur bacteria. Biochimica et Biophysica Acta: Bioenergetics, 1556 . pp. 247-253. ISSN 0005-2728

Spiedel, D. et al. (2002) Tuning of the optical and electrochemical properties of the primary donor bacteriochlorophylls in the reaction centre from Rhodobacter sphaeroides: spectroscopy and structure. Biochimica et Biophysica Acta: BBA Bioenergetics, 1554 (1-2). pp. 75-93. ISSN 0005-2728 (doi:10.1016/S0005-2728(02)00215-3)

2001

Andersson, PA, Takaichi, S, Cogdell, RJ, and Gillbro, T (2001) Photophysical characterization of natural cis-carotenoids. Photochemistry and Photobiology, 74 . pp. 549-557.

Bittl, R, Schlodder, E, Geisenheimer, I, Lubitz, W, and Cogdell, RJ (2001) Transient EPR and absorption studies of carotenoid triplet formation in purple bacterial antenna complexes. Journal of Physical Chemistry B, 105 . pp. 5525-5535.

Dolan, PM, Miller, D, Cogdell, RJ, Birge, RR, and Frank, HA (2001) Linear dichroism and the transition dipole moment orientation of the carotenoid in the LH2 antenna complex in membranes of Rhodopseudomonas acidophila strain 10050. Journal of Physical Chemistry B, 105 . pp. 12134-12142. (doi:10.1021/jp010271b)

Egorova-Zachernyuk, T.A., Hollander, J., Fraser, N., Gast, P., Hoff, A.J., Cogdell, R., de Groot, H.J.M., and Baldus, M. (2001) Heteronuclear 2D-correlations in a uniformly [C-13, N-15] labeled membrane-protein complex at ultra-high magnetic fields. Journal of Biomolecular NMR, 19 . pp. 243-253. ISSN 0925-2738

Fraser, NJ, Hashimoto, H, and Cogdell, RJ (2001) Carotenoids and bacterial photosynthesis: The story so far ... Photosynthesis Research, 70 . pp. 249-256.

Fyfe, P.K., McAuley, K.E., Roszak, A.W., Isaacs, N.W., Cogdell, R.J., and Jones, M.R. (2001) Probing the interface between membrane proteins and membrane lipids by X-ray crystallography. Trends in Biochemical Sciences, 26 (2). pp. 106-112. ISSN 1362-4326 (doi:10.1016/S0968-0004(00)01746-1)

Gall, A, Robert, B, Cogdell, RJ, Bellissent-Funel, MC, and Fraser, NJ (2001) Probing the binding sites of exchanged chlorophyll a in LN2 by Raman and site-selection fluorescence spectroscopies. Febs Letters, 491 . pp. 143-147.

Gradinaru, CC, Kennis, JTM, Papagiannakis, E, van Stokkum, IHM, Cogdell, RJ, Fleming, GR, Niederman, RA, and van Grondelle, R (2001) An unusual pathway of excitation energy deactivation in carotenoids: Singlet-to-triplet conversion on an ultrafast timescale in a photosynthetic antenna. Proceedings of the National Academy of Sciences of the United States of America, 98 . pp. 2364-2369.

Kumble, R., Howard, T.D., Cogdell, R.J., and Hochstrasser, R.M. (2001) Dynamic infrared band-band spectroscopy of peripheral light-harvesting complexes from R-acidophila. Journal of Photochemistry and Photobiology A: Chemistry, 142 . pp. 121-126.

Macpherson, AN, Arellano, JB, Fraser, NJ, Cogdell, RJ, and Gillbro, T (2001) Efficient energy transfer from the carotenoid S-2 state in a photosynthetic light-harvesting complex. Biophysical Journal, 80 . pp. 923-930.

Matsuzaki, S, Zazubovich, V, Fraser, NJ, Cogdell, RJ, and Small, GJ (2001) Energy transfer dynamics in LH2 complexes of Rhodopseudomonas acidophila containing only one B800 molecule. Journal of Physical Chemistry B, 105 . pp. 7049-7056.

McLuskey, K, Prince, SM, Cogdell, RJ, and Isaacs, NW (2001) The crystallographic structure of the B800-820 LH3 light-harvesting complex from the purple bacteria Rhodopseudomonas acidophila strain 7050. Biochemistry, 40 . pp. 8783-8789. (doi:10.1021/bi010309a)