Biostatistics and Statistical Genetics

  • Lung Cancer in Greater Glasgow

    Map of Glasgow

    Statisticians and health professionals are interested in producing maps showing cancer risk, so that areas with elevated risks can be detected.

  • Network Meta-Analysis

    Plot

    Mean, mean plot with 95% confidence intervals for a network meta-analysis in diabetes.

  • Studying Obesity

    Violin plots

    Statistical models studying the connections between obesity indicators and socio-economic factors help developing anti-obesity strategies.

  • Estimation of Historic Population Sizes

    Violin plots

    Genetic variability between modern individuals allows estimation of historic population sizes.

  • Network Meta-Analysis

    Shade plot

    Shade plot for P-values for all pairwise contrasts for a network meta-analysis.

  • Where did modern humans come from?

    Violin plots

    Maximum-likelihood phylogenetic analysis of mitochondrial DNA variation reveals that modern humans exited Africa via South Asia.

  • Regression to the Mean

    Scatter plot

    Regression to the mean: Diastolic Blood Pressure measurements on two occasions.

  • Ancestry of African Slaves

    Violin plots

    Statistical genetics provides a means of partitioning the ancestry of descendants of African slaves in the USA to different regions of Africa.

  • Illustration of the t-Test

    Illustration

    Geometric repesentation of Student's t-test showing critical region and a point in the sample space for a sample of two observations.

  • Statistical Testing

    Illustration

    Bivariate contours under null and alternative hypotheses with Bonferroni boundaries illustrated.

This group researches into design, and analysis of quantitative investigations in human health and genetics with a particular emphasis on applying advanced methods of statistical inference.

Dr Christina A Cobbold Senior Lecturer

Bayesian methods; inference and statistical methods for dynamical systems with applications to genetic data

Member of other research groups: Mathematical Biology
Research student: Suzanne Doig

Caroline Haig University Teacher

Research Topic: A critique of models for body composition and energy-balance components in childhood and adolescence
Member of other research groups: Scholarship of Learning and Teaching in Statistics

Dr Vincent Macaulay Senior Lecturer

Statistical genetics; population genetics; Bayesian methods; phylogenetics

Member of other research groups: Statistical Methodology
Research students: Mhairi Kerr, Colette Mair
Postgraduate opportunities: The evolution of shape, Modelling Genetic Variation

Dr Tereza Neocleous Lecturer

Forensic statistics; quantile regression; semiparametric models; biostatistics applications

Member of other research groups: Statistical Modelling
Research students: Charalampos Chanialidis, Gary Napier
Postgraduate opportunities: Mixture-based approaches to quantile regression, Quantile regression for count data, Comparison of methods for conditional quantile estimation

Craig Anderson PhD Student

Research Topic: Modelling disease risk in space and time
Member of other research groups: Statistical Modelling
Supervisors: Nema Dean, Duncan Lee

Emanuel Baah PhD Student

Research Topic: Analysis of spontaneous reports of side-effects
Supervisor: Stephen Senn

Rob Donald PhD Student

Research Topic: Online Assessment of Event Prediction Models
Supervisor: Ludger Evers

Rachael Fulton PhD Student

Research Topic: Covariate adjustment in stroke trials
Supervisors: Kennedy Lees (MVLS), Stephen Senn

Colette Mair PhD Student

Research Topic: Dimension reduction in population genetic inference
Supervisor: Vincent Macaulay

Karen McTeague PhD Student

Research Topic: Design and analysis of clinical trials in pharmacogenetics
Supervisors: Vlad Anisimov (GSK), Stephen Senn

Helen Powell PhD Student

Research Topic: Bayesian hierarchical models for estimating the effects of air pollution on human health
Member of other research groups: Environmental Statistics
Supervisor: Duncan Lee

Modelling the evolution of disease risk in space and time (PhD)

Supervisors: Duncan Lee
Relevant research groups: Environmental Statistics, Biostatistics and Statistical Genetics

Mapping the spatial pattern in disease risk over a city or country is a common problem in epidemiology, and the primary aim is to determine which areas exhibit the greatest risks of disease. A recent extension to this field is to try and model how and to what extent the spatial risk surface changes over time. The motivation for this is to address questions such as: (1) on average across the study region, is the risk of disease getting more or less pronounced? and (2) in which areas of the study region are the disease risks getting worse? This project will develop statistical models to address these questions, and will apply them to map the evolution of important diseases, such as cancer and coronary heart disease, across regions of the UK.

 

PhD and MSc projects with Stephen Senn (MSc / PhD)

Supervisors: Stephen Senn
Relevant research groups: Biostatistics and Statistical Genetics, Statistical Modelling

A list of potential PhD and MSc projects with Stephen Senn can be found at http://www.senns.demon.co.uk/Research.html.

 

Modelling Genetic Variation (PhD)

Supervisors: Vincent Macaulay
Relevant research groups: Biostatistics and Statistical Genetics

Variation in the distribution of different DNA sequences across individuals has been shaped by many processes which can be modelled probabilistically, processes such as demographic factors like prehistoric population movements, or natural selection. This project involves developing new techniques for teasing out information on those processes from the wealth of raw data that is now being generated by high-throughput genetic assays, and is likely to involve computationally-intensive sampling techniques to approximate the posterior distribution of parameters of interest. The characterization of the amount of population structure on different geographical scales will influence the design of experiments to identify the genetic variants that increase risk of complex diseases, such as diabetes or heart disease.

 

Accounting for preferential sampling in air pollution and health studies (PhD)

Supervisors: Duncan Lee
Relevant research groups: Environmental Statistics, Biostatistics and Statistical Genetics

The health impact of exposure to air pollution is thought to reduce average life expectancy by six months, with an estimated equivalent health cost of 19 billion each year (from DEFRA). These effects have been estimated using statistical models, which quantify the impact on human health of exposure in both the short and the long term. However, the estimation of such effects is challenging, because individual level measures of health and pollution exposure are not available. Therefore, the majority of studies are conducted at the population level, and the resulting inference can only be made about the effects of pollution on overall population health. However, the data used in such studies are spatially misaligned, as the health data relate to a city or county, while the pollution concentrations are measured at individual locations. Furthermore, pollution monitors are typically located where concentrations are thought to be highest, known as preferential sampling, which is likely to result in overly high measurements being recorded. This project aims to develop statistical methodology to address these problems, and thus provide a less biased estimate of the effects of pollution on health than are currently produced.

 

Honorary degree awarded to Sir David Cox

Wednesday 29th June, 2011
The University of Glasgow has awarded the honorary degree of Doctor of Science to Sir David Cox. Sir David is a world-leader who has...